RNA–Protein interactions for RNA: YBL079W

NUP170, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP170, Length 4,509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP170YBL079W SRL2Q12020 392 aa2.16□□□□□ -2.06
NUP170YBL079W GEP5Q12393 293 aa2.16□□□□□ -2.06
NUP170YBL079W GCR1P07261 785 aa2.16□□□□□ -2.06
NUP170YBL079W RPS21AP0C0V8 87 aaKnown RBP2.16□□□□□ -2.06
NUP170YBL079W APA2P22108 325 aa2.16□□□□□ -2.06
NUP170YBL079W APN1P22936 367 aa2.16□□□□□ -2.06
NUP170YBL079W AAR2P32357 355 aaPredicted RBP2.16□□□□□ -2.06
NUP170YBL079W SPO23P33757 523 aa2.16□□□□□ -2.06
NUP170YBL079W INM1P38710 295 aa2.16□□□□□ -2.06
NUP170YBL079W PFK26P40433 827 aaKnown RBP2.16□□□□□ -2.06
NUP170YBL079W IMA5P40884 581 aa2.16□□□□□ -2.06
NUP170YBL079W PAC10P48363 199 aa2.16□□□□□ -2.06
NUP170YBL079W PSR1Q07800 427 aa2.16□□□□□ -2.06
NUP170YBL079W PFA4Q12006 378 aa2.16□□□□□ -2.06
NUP170YBL079W REP1P03871 373 aa2.15□□□□□ -2.06
NUP170YBL079W CDC9P04819 755 aa2.15□□□□□ -2.06
NUP170YBL079W RAD1P06777 1100 aa2.15□□□□□ -2.06
NUP170YBL079W MOD5P07884 428 aa2.15□□□□□ -2.06
NUP170YBL079W TSR4P25040 408 aa2.15□□□□□ -2.06
NUP170YBL079W SPB1P25582 841 aaPredicted RBP2.15□□□□□ -2.06
NUP170YBL079W THI80P35202 319 aa2.15□□□□□ -2.06
NUP170YBL079W FTH1P38310 465 aa2.15□□□□□ -2.06
NUP170YBL079W RCK1P38622 512 aa2.15□□□□□ -2.06
NUP170YBL079W LCP5P40079 357 aaPredicted RBP2.15□□□□□ -2.06
NUP170YBL079W YRB1P41920 201 aaKnown RBP2.15□□□□□ -2.06
NUP170YBL079W YHC3P47040 408 aa2.15□□□□□ -2.06
NUP170YBL079W YGR066CP53242 292 aa2.15□□□□□ -2.06
NUP170YBL079W ATF2P53296 535 aa2.15□□□□□ -2.06
NUP170YBL079W YPL068CQ02749 293 aa2.15□□□□□ -2.06
NUP170YBL079W TRS23Q03784 219 aa2.15□□□□□ -2.06
NUP170YBL079W VAM6Q07468 1049 aa2.15□□□□□ -2.06
NUP170YBL079W YOR352WQ08816 343 aa2.15□□□□□ -2.06
NUP170YBL079W MDM32Q12171 622 aa2.15□□□□□ -2.06
NUP170YBL079W PHO5P00635 467 aa2.15□□□□□ -2.07
NUP170YBL079W SPO12P17123 173 aa2.15□□□□□ -2.07
NUP170YBL079W HXT3P32466 567 aaKnown RBP2.15□□□□□ -2.07
NUP170YBL079W HXT4P32467 576 aa2.15□□□□□ -2.07
NUP170YBL079W RMA1P36001 430 aaKnown RBP2.15□□□□□ -2.07
NUP170YBL079W HXT6P39003 570 aaKnown RBP2.15□□□□□ -2.07
NUP170YBL079W HXT7P39004 570 aa2.15□□□□□ -2.07
NUP170YBL079W ECM18Q04623 453 aa2.15□□□□□ -2.07
NUP170YBL079W REX4Q08237 289 aa2.15□□□□□ -2.07
NUP170YBL079W NIP7Q08962 181 aaKnown RBP2.15□□□□□ -2.07
NUP170YBL079W NUR1Q12066 484 aa2.15□□□□□ -2.07
NUP170YBL079W SLP1Q12232 587 aa2.15□□□□□ -2.07
NUP170YBL079W SAS5Q99314 248 aa2.15□□□□□ -2.07
NUP170YBL079W RAD7P06779 565 aa2.15□□□□□ -2.07
NUP170YBL079W PEP4P07267 405 aaKnown RBP2.15□□□□□ -2.07
NUP170YBL079W SEC53P07283 254 aaKnown RBP2.15□□□□□ -2.07
NUP170YBL079W YML003WP0CF16 290 aa2.15□□□□□ -2.07
NUP170YBL079W CNA1P23287 553 aa2.15□□□□□ -2.07
NUP170YBL079W YCR006CP25350 157 aa2.15□□□□□ -2.07
NUP170YBL079W NIC96P34077 839 aa2.15□□□□□ -2.07
NUP170YBL079W CUE2P36075 443 aaKnown RBP2.15□□□□□ -2.07
NUP170YBL079W MET30P39014 640 aa2.15□□□□□ -2.07
NUP170YBL079W SCS2P40075 244 aaKnown RBP2.15□□□□□ -2.07
NUP170YBL079W SWP1Q02795 286 aa2.15□□□□□ -2.07
NUP170YBL079W MRPL1Q04599 285 aa2.15□□□□□ -2.07
NUP170YBL079W YLR413WQ06689 675 aa2.15□□□□□ -2.07
NUP170YBL079W LUC7Q07508 261 aaPredicted RBP2.15□□□□□ -2.07
NUP170YBL079W YPL191CQ08930 360 aa2.15□□□□□ -2.07
NUP170YBL079W CWC2Q12046 339 aaPredicted RBP2.15□□□□□ -2.07
NUP170YBL079W BAG7Q12128 409 aa2.15□□□□□ -2.07
NUP170YBL079W NSL1Q12143 216 aa2.15□□□□□ -2.07
NUP170YBL079W MDY2Q12285 212 aa2.15□□□□□ -2.07
NUP170YBL079W MSW1P04803 379 aa2.14□□□□□ -2.07
NUP170YBL079W KSS1P14681 368 aa2.14□□□□□ -2.07
NUP170YBL079W SEC66P33754 206 aa2.14□□□□□ -2.07
NUP170YBL079W ASK1P35734 292 aa2.14□□□□□ -2.07
NUP170YBL079W GLY1P37303 387 aaKnown RBP2.14□□□□□ -2.07
NUP170YBL079W ECM31P38122 312 aa2.14□□□□□ -2.07
NUP170YBL079W MSG5P38590 489 aa2.14□□□□□ -2.07
NUP170YBL079W YHL008CP38750 627 aa2.14□□□□□ -2.07
NUP170YBL079W OSH7P38755 437 aa2.14□□□□□ -2.07
NUP170YBL079W JSN1P47135 1091 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
NUP170YBL079W GPI8P49018 411 aa2.14□□□□□ -2.07
NUP170YBL079W CUZ1P53899 274 aa2.14□□□□□ -2.07
NUP170YBL079W TIM10P87108 93 aa2.14□□□□□ -2.07
NUP170YBL079W GAS3Q03655 524 aa2.14□□□□□ -2.07
NUP170YBL079W ARR1Q06596 294 aa2.14□□□□□ -2.07
NUP170YBL079W RTC5Q12108 567 aaKnown RBP2.14□□□□□ -2.07
NUP170YBL079W YLR111WQ12528 110 aa2.14□□□□□ -2.07
NUP170YBL079W RPL6BP05739 176 aaKnown RBP2.14□□□□□ -2.07
NUP170YBL079W ILV5P06168 395 aaKnown RBP2.14□□□□□ -2.07
NUP170YBL079W SUI3P09064 285 aaKnown RBP2.14□□□□□ -2.07
NUP170YBL079W COS2P0CX12 379 aa2.14□□□□□ -2.07
NUP170YBL079W COS3P0CX13 379 aa2.14□□□□□ -2.07
NUP170YBL079W UGA1P17649 471 aa2.14□□□□□ -2.07
NUP170YBL079W RNQ1P25367 405 aa2.14□□□□□ -2.07
NUP170YBL079W TOA1P32773 286 aa2.14□□□□□ -2.07
NUP170YBL079W DHR2P36009 735 aaPredicted RBP2.14□□□□□ -2.07
NUP170YBL079W ATG14P38270 344 aa2.14□□□□□ -2.07
NUP170YBL079W MUP3P38734 546 aa2.14□□□□□ -2.07
NUP170YBL079W MNN9P39107 395 aaKnown RBP2.14□□□□□ -2.07
NUP170YBL079W RPS26AP39938 119 aaKnown RBP2.14□□□□□ -2.07
NUP170YBL079W RPS26BP39939 119 aaKnown RBP2.14□□□□□ -2.07
NUP170YBL079W COS4P43542 379 aa2.14□□□□□ -2.07
NUP170YBL079W HST2P53686 357 aa2.14□□□□□ -2.07
NUP170YBL079W OAZ1Q02803 292 aa2.14□□□□□ -2.07
NUP170YBL079W VMS1Q04311 632 aaKnown RBP2.14□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms