RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 PANK4Q9NVE7 773 aa10.82□□□□□ -0.68
PHGDH-215ENST00000641371 COL20A1Q9P218 1284 aa10.82□□□□□ -0.68
PHGDH-215ENST00000641371 KCNG1Q9UIX4 513 aa10.82□□□□□ -0.68
PHGDH-215ENST00000641371 ODF2LQ9ULJ1 636 aa10.82□□□□□ -0.68
PHGDH-215ENST00000641371 COL4A3BPQ9Y5P4 624 aa10.82□□□□□ -0.68
PHGDH-215ENST00000641371 UBE4BO95155 1302 aa10.82□□□□□ -0.68
PHGDH-215ENST00000641371 A0A1B0GTH6 734 aa10.81□□□□□ -0.68
PHGDH-215ENST00000641371 TBCAO75347 108 aaKnown RBP10.81□□□□□ -0.68
PHGDH-215ENST00000641371 EIF3JO75822 258 aaKnown RBP10.81□□□□□ -0.68
PHGDH-215ENST00000641371 GNA14O95837 355 aa10.81□□□□□ -0.68
PHGDH-215ENST00000641371 SSBP05455 408 aaKnown RBP eCLIP10.81□□□□□ -0.68
PHGDH-215ENST00000641371 TPM1P09493 284 aa10.81□□□□□ -0.68
PHGDH-215ENST00000641371 ARP10275 920 aa10.81□□□□□ -0.68
PHGDH-215ENST00000641371 IDEP14735 1019 aa10.81□□□□□ -0.68
PHGDH-215ENST00000641371 CD44P16070 742 aaKnown RBP10.81□□□□□ -0.68
PHGDH-215ENST00000641371 TAL1P17542 331 aaPredicted RBP10.81□□□□□ -0.68
PHGDH-215ENST00000641371 ITGB5P18084 799 aa10.81□□□□□ -0.68
PHGDH-215ENST00000641371 CYP11B2P19099 503 aa10.81□□□□□ -0.68
PHGDH-215ENST00000641371 CASP1P29466 404 aa10.81□□□□□ -0.68
PHGDH-215ENST00000641371 ICAM3P32942 547 aa10.81□□□□□ -0.68
PHGDH-215ENST00000641371 ABCD1P33897 745 aa10.81□□□□□ -0.68
PHGDH-215ENST00000641371 GCLCP48506 637 aaPredicted RBP10.81□□□□□ -0.68
PHGDH-215ENST00000641371 MRPS9P82933 396 aaKnown RBP10.81□□□□□ -0.68
PHGDH-215ENST00000641371 COASYQ13057 564 aa10.81□□□□□ -0.68
PHGDH-215ENST00000641371 DGKZQ13574 1117 aa10.81□□□□□ -0.68
PHGDH-215ENST00000641371 ALCAMQ13740 583 aa10.81□□□□□ -0.68
PHGDH-215ENST00000641371 STXBP2Q15833 593 aa10.81□□□□□ -0.68
PHGDH-215ENST00000641371 CENPPQ6IPU0 288 aa10.81□□□□□ -0.68
PHGDH-215ENST00000641371 MYOCDQ8IZQ8 938 aa10.81□□□□□ -0.68
PHGDH-215ENST00000641371 CYP2W1Q8TAV3 490 aa10.81□□□□□ -0.68
PHGDH-215ENST00000641371 DNAJC19Q96DA6 116 aa10.81□□□□□ -0.68
PHGDH-215ENST00000641371 TRIM47Q96LD4 638 aa10.81□□□□□ -0.68
PHGDH-215ENST00000641371 HSD3B7Q9H2F3 369 aa10.81□□□□□ -0.68
PHGDH-215ENST00000641371 GBA2Q9HCG7 927 aaPredicted RBP10.81□□□□□ -0.68
PHGDH-215ENST00000641371 ZCCHC17Q9NP64 241 aaKnown RBP10.81□□□□□ -0.68
PHGDH-215ENST00000641371 LIMA1Q9UHB6 759 aaKnown RBP10.81□□□□□ -0.68
PHGDH-215ENST00000641371 DBR1Q9UK59 544 aaKnown RBP10.81□□□□□ -0.68
PHGDH-215ENST00000641371 TRPM7Q96QT4 1865 aa10.81□□□□□ -0.68
PHGDH-215ENST00000641371 POTEFA5A3E0 1075 aa10.8□□□□□ -0.68
PHGDH-215ENST00000641371 POTEB2H3BUK9 544 aa10.8□□□□□ -0.68
PHGDH-215ENST00000641371 EIF3DO15371 548 aaKnown RBP eCLIP10.8□□□□□ -0.68
PHGDH-215ENST00000641371 ZNF500O60304 480 aaPredicted RBP10.8□□□□□ -0.68
PHGDH-215ENST00000641371 SLITRK3O94933 977 aa10.8□□□□□ -0.68
PHGDH-215ENST00000641371 POTEIP0CG38 1075 aa10.8□□□□□ -0.68
PHGDH-215ENST00000641371 TGFB3P10600 412 aa10.8□□□□□ -0.68
PHGDH-215ENST00000641371 MAPTP10636 758 aaKnown RBP10.8□□□□□ -0.68
PHGDH-215ENST00000641371 MYCLP12524 364 aaPredicted RBP10.8□□□□□ -0.68
PHGDH-215ENST00000641371 SCP2P22307 547 aa10.8□□□□□ -0.68
PHGDH-215ENST00000641371 GUCY2CP25092 1073 aa10.8□□□□□ -0.68
PHGDH-215ENST00000641371 QARSP47897 775 aaKnown RBP10.8□□□□□ -0.68
PHGDH-215ENST00000641371 KCNJ6P48051 423 aa10.8□□□□□ -0.68
PHGDH-215ENST00000641371 ECM1Q16610 540 aa10.8□□□□□ -0.68
PHGDH-215ENST00000641371 TREML2Q5T2D2 321 aa10.8□□□□□ -0.68
PHGDH-215ENST00000641371 TTI2Q6NXR4 508 aa10.8□□□□□ -0.68
PHGDH-215ENST00000641371 POTEGQ6S5H5 508 aa10.8□□□□□ -0.68
PHGDH-215ENST00000641371 POTEEQ6S8J3 1075 aa10.8□□□□□ -0.68
PHGDH-215ENST00000641371 KCNK18Q7Z418 384 aa10.8□□□□□ -0.68
PHGDH-215ENST00000641371 ANKRD23Q86SG2 305 aa10.8□□□□□ -0.68
PHGDH-215ENST00000641371 VSTM4Q8IW00 320 aa10.8□□□□□ -0.68
PHGDH-215ENST00000641371 C4orf19Q8IY42 314 aa10.8□□□□□ -0.68
PHGDH-215ENST00000641371 SPC24Q8NBT2 197 aa10.8□□□□□ -0.68
PHGDH-215ENST00000641371 LRRC15Q8TF66 581 aa10.8□□□□□ -0.68
PHGDH-215ENST00000641371 ATP6V0A1Q93050 837 aa10.8□□□□□ -0.68
PHGDH-215ENST00000641371 CCDC43Q96MW1 224 aaKnown RBP10.8□□□□□ -0.68
PHGDH-215ENST00000641371 UNC45AQ9H3U1 944 aa10.8□□□□□ -0.68
PHGDH-215ENST00000641371 OLFML3Q9NRN5 406 aa10.8□□□□□ -0.68
PHGDH-215ENST00000641371 ANKEF1Q9NU02 776 aa10.8□□□□□ -0.68
PHGDH-215ENST00000641371 FZD1Q9UP38 647 aa10.8□□□□□ -0.68
PHGDH-215ENST00000641371 GDAQ9Y2T3 454 aa10.8□□□□□ -0.68
PHGDH-215ENST00000641371 RIPK3Q9Y572 518 aa10.8□□□□□ -0.68
PHGDH-215ENST00000641371 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.8□□□□□ -0.681e-6■□□□□ 10.9
PHGDH-215ENST00000641371 ITIH6Q6UXX5 1313 aa10.8□□□□□ -0.68
PHGDH-215ENST00000641371 KIAA1217Q5T5P2 1943 aa10.8□□□□□ -0.68
PHGDH-215ENST00000641371 TESPA1A2RU30 521 aaPredicted RBP10.79□□□□□ -0.68
PHGDH-215ENST00000641371 ARHGEF35A5YM69 484 aa10.79□□□□□ -0.68
PHGDH-215ENST00000641371 E9PMD0 336 aa10.79□□□□□ -0.68
PHGDH-215ENST00000641371 EML1O00423 815 aa10.79□□□□□ -0.68
PHGDH-215ENST00000641371 CCP110O43303 1012 aa10.79□□□□□ -0.68
PHGDH-215ENST00000641371 FAM13AO94988 1023 aa10.79□□□□□ -0.68
PHGDH-215ENST00000641371 ATP1A3P13637 1013 aa10.79□□□□□ -0.68
PHGDH-215ENST00000641371 SFPQP23246 707 aaKnown RBP eCLIP10.79□□□□□ -0.68
PHGDH-215ENST00000641371 CLCN1P35523 988 aa10.79□□□□□ -0.68
PHGDH-215ENST00000641371 PSMC5P62195 406 aa10.79□□□□□ -0.68
PHGDH-215ENST00000641371 UBXN2AP68543 259 aa10.79□□□□□ -0.68
PHGDH-215ENST00000641371 NR1I3Q14994 352 aa10.79□□□□□ -0.68
PHGDH-215ENST00000641371 EDRF1Q3B7T1 1238 aa10.79□□□□□ -0.68
PHGDH-215ENST00000641371 HERC4Q5GLZ8 1057 aaPredicted RBP10.79□□□□□ -0.68
PHGDH-215ENST00000641371 TCP11X2Q5H9J9 407 aa10.79□□□□□ -0.68
PHGDH-215ENST00000641371 SPECC1LQ69YQ0 1117 aa10.79□□□□□ -0.68
PHGDH-215ENST00000641371 OTUD6AQ7L8S5 288 aa10.79□□□□□ -0.68
PHGDH-215ENST00000641371 DYMQ7RTS9 669 aa10.79□□□□□ -0.68
PHGDH-215ENST00000641371 CCDC186Q7Z3E2 898 aa10.79□□□□□ -0.68
PHGDH-215ENST00000641371 NCAPG2Q86XI2 1143 aa10.79□□□□□ -0.68
PHGDH-215ENST00000641371 TPH2Q8IWU9 490 aa10.79□□□□□ -0.68
PHGDH-215ENST00000641371 TRMT44Q8IYL2 757 aaKnown RBP10.79□□□□□ -0.68
PHGDH-215ENST00000641371 SMYD4Q8IYR2 804 aaPredicted RBP10.79□□□□□ -0.68
PHGDH-215ENST00000641371 CSGALNACT2Q8N6G5 542 aa10.79□□□□□ -0.68
PHGDH-215ENST00000641371 KIAA0895Q8NCT3 520 aa10.79□□□□□ -0.68
PHGDH-215ENST00000641371 DYDC2Q96IM9 177 aa10.79□□□□□ -0.68
PHGDH-215ENST00000641371 WNK4Q96J92 1243 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms