RNA–Protein interactions for RNA: ENST00000640931.1

RTTN-223, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 2,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-223ENST00000640931 TBC1D12O60347 775 aa8.73□□□□□ -1.01
RTTN-223ENST00000640931 ATP6V1G2O95670 118 aa8.73□□□□□ -1.01
RTTN-223ENST00000640931 MARCKSP29966 332 aaPredicted RBP8.73□□□□□ -1.01
RTTN-223ENST00000640931 CSE1LP55060 971 aaKnown RBP8.73□□□□□ -1.01
RTTN-223ENST00000640931 GNGT1P63211 74 aa8.73□□□□□ -1.01
RTTN-223ENST00000640931 SKOR1P84550 965 aa8.73□□□□□ -1.01
RTTN-223ENST00000640931 KIF23Q02241 960 aaPredicted RBP8.73□□□□□ -1.01
RTTN-223ENST00000640931 SEC23AQ15436 765 aa8.73□□□□□ -1.01
RTTN-223ENST00000640931 CNGA3Q16281 694 aa8.73□□□□□ -1.01
RTTN-223ENST00000640931 INAQ16352 499 aa8.73□□□□□ -1.01
RTTN-223ENST00000640931 SRGAP1Q7Z6B7 1085 aa8.73□□□□□ -1.01
RTTN-223ENST00000640931 MAPKAPK5Q8IW41 473 aa8.73□□□□□ -1.01
RTTN-223ENST00000640931 CCAR1Q8IX12 1150 aaKnown RBP8.73□□□□□ -1.01
RTTN-223ENST00000640931 ENAHQ8N8S7 591 aaPredicted RBP8.73□□□□□ -1.01
RTTN-223ENST00000640931 TBC1D16Q8TBP0 767 aa8.73□□□□□ -1.01
RTTN-223ENST00000640931 OXER1Q8TDS5 423 aa8.73□□□□□ -1.01
RTTN-223ENST00000640931 MORC4Q8TE76 937 aa8.73□□□□□ -1.01
RTTN-223ENST00000640931 ZNF570Q96NI8 536 aa8.73□□□□□ -1.01
RTTN-223ENST00000640931 TRAPPC9Q96Q05 1148 aa8.73□□□□□ -1.01
RTTN-223ENST00000640931 ZCWPW1Q9H0M4 648 aa8.73□□□□□ -1.01
RTTN-223ENST00000640931 RABEP2Q9H5N1 569 aa8.73□□□□□ -1.01
RTTN-223ENST00000640931 NOD2Q9HC29 1040 aa8.73□□□□□ -1.01
RTTN-223ENST00000640931 CD209Q9NNX6 404 aa8.73□□□□□ -1.01
RTTN-223ENST00000640931 SLC5A4Q9NY91 659 aa8.73□□□□□ -1.01
RTTN-223ENST00000640931 SH3GLB1Q9Y371 365 aa8.73□□□□□ -1.01
RTTN-223ENST00000640931 SAMM50Q9Y512 469 aa8.73□□□□□ -1.01
RTTN-223ENST00000640931 PCDHAC2Q9Y5I4 1007 aa8.73□□□□□ -1.01
RTTN-223ENST00000640931 TIAM2Q8IVF5 1701 aa8.72□□□□□ -1.01
RTTN-223ENST00000640931 A0A1B0GVL5 298 aa8.72□□□□□ -1.01
RTTN-223ENST00000640931 TMEM247A6NEH6 219 aa8.72□□□□□ -1.01
RTTN-223ENST00000640931 ANP32DO95626 131 aa8.72□□□□□ -1.01
RTTN-223ENST00000640931 MMP10P09238 476 aa8.72□□□□□ -1.01
RTTN-223ENST00000640931 FOSL1P15407 271 aa8.72□□□□□ -1.01
RTTN-223ENST00000640931 GNAT2P19087 354 aa8.72□□□□□ -1.01
RTTN-223ENST00000640931 KIF5BP33176 963 aa8.72□□□□□ -1.01
RTTN-223ENST00000640931 PLCD1P51178 756 aa8.72□□□□□ -1.01
RTTN-223ENST00000640931 MRPS35P82673 323 aaKnown RBP8.72□□□□□ -1.01
RTTN-223ENST00000640931 COL19A1Q14993 1142 aa8.72□□□□□ -1.01
RTTN-223ENST00000640931 RNF187Q5TA31 235 aaPredicted RBP8.72□□□□□ -1.01
RTTN-223ENST00000640931 CCDC121Q6ZUS5 278 aa8.72□□□□□ -1.01
RTTN-223ENST00000640931 DEFB132Q7Z7B7 95 aa8.72□□□□□ -1.01
RTTN-223ENST00000640931 UBE2Q1Q7Z7E8 422 aa8.72□□□□□ -1.01
RTTN-223ENST00000640931 LRRC43Q8N309 656 aa8.72□□□□□ -1.01
RTTN-223ENST00000640931 VPS37AQ8NEZ2 397 aa8.72□□□□□ -1.01
RTTN-223ENST00000640931 TGFBRAP1Q8WUH2 860 aa8.72□□□□□ -1.01
RTTN-223ENST00000640931 P3H4Q92791 437 aa8.72□□□□□ -1.01
RTTN-223ENST00000640931 TMEM87BQ96K49 555 aa8.72□□□□□ -1.01
RTTN-223ENST00000640931 BPIFA3Q9BQP9 254 aa8.72□□□□□ -1.01
RTTN-223ENST00000640931 OSBPL1AQ9BXW6 950 aa8.72□□□□□ -1.01
RTTN-223ENST00000640931 KRT23Q9C075 422 aa8.72□□□□□ -1.01
RTTN-223ENST00000640931 SYNCQ9H7C4 482 aa8.72□□□□□ -1.01
RTTN-223ENST00000640931 GINM1Q9NU53 330 aa8.72□□□□□ -1.01
RTTN-223ENST00000640931 MCM9Q9NXL9 1143 aa8.72□□□□□ -1.01
RTTN-223ENST00000640931 METRNQ9UJH8 293 aa8.72□□□□□ -1.01
RTTN-223ENST00000640931 PCDHA7Q9UN72 937 aa8.72□□□□□ -1.01
RTTN-223ENST00000640931 ECM29Q5VYK3 1845 aa8.71□□□□□ -1.01
RTTN-223ENST00000640931 BICDL2A1A5D9 508 aa8.71□□□□□ -1.01
RTTN-223ENST00000640931 USP17L3A6NCW0 530 aa8.71□□□□□ -1.01
RTTN-223ENST00000640931 USP17L4A6NCW7 530 aa8.71□□□□□ -1.01
RTTN-223ENST00000640931 RGL2O15211 777 aa8.71□□□□□ -1.01
RTTN-223ENST00000640931 PEX14O75381 377 aa8.71□□□□□ -1.01
RTTN-223ENST00000640931 WDHD1O75717 1129 aaPredicted RBP8.71□□□□□ -1.01
RTTN-223ENST00000640931 LDHBP07195 334 aaKnown RBP8.71□□□□□ -1.01
RTTN-223ENST00000640931 PDGFRBP09619 1106 aa8.71□□□□□ -1.01
RTTN-223ENST00000640931 MLH1P40692 756 aa8.71□□□□□ -1.01
RTTN-223ENST00000640931 IARSP41252 1262 aaKnown RBP8.71□□□□□ -1.01
RTTN-223ENST00000640931 MNX1P50219 401 aaPredicted RBP8.71□□□□□ -1.01
RTTN-223ENST00000640931 ZNF132P52740 706 aa8.71□□□□□ -1.01
RTTN-223ENST00000640931 CHMP4BP1P59074 171 aa8.71□□□□□ -1.01
RTTN-223ENST00000640931 EN1Q05925 392 aaPredicted RBP8.71□□□□□ -1.01
RTTN-223ENST00000640931 EZH2Q15910 746 aaKnown RBP8.71□□□□□ -1.01
RTTN-223ENST00000640931 USP17L1Q7RTZ2 530 aa8.71□□□□□ -1.01
RTTN-223ENST00000640931 SGMS1Q86VZ5 419 aa8.71□□□□□ -1.01
RTTN-223ENST00000640931 ZNF654Q8IZM8 581 aa8.71□□□□□ -1.01
RTTN-223ENST00000640931 SLC7A5P1Q8MH63 180 aa8.71□□□□□ -1.01
RTTN-223ENST00000640931 KRI1Q8N9T8 703 aaKnown RBP8.71□□□□□ -1.01
RTTN-223ENST00000640931 ZNF280CQ8ND82 737 aa8.71□□□□□ -1.01
RTTN-223ENST00000640931 CLIP3Q96DZ5 547 aa8.71□□□□□ -1.01
RTTN-223ENST00000640931 STAMBPL1Q96FJ0 436 aa8.71□□□□□ -1.01
RTTN-223ENST00000640931 SH3GL2Q99962 352 aa8.71□□□□□ -1.01
RTTN-223ENST00000640931 SLC7A5P2Q9GIP4 190 aa8.71□□□□□ -1.01
RTTN-223ENST00000640931 BHMT2Q9H2M3 363 aa8.71□□□□□ -1.01
RTTN-223ENST00000640931 MRPL46Q9H2W6 279 aaKnown RBP8.71□□□□□ -1.01
RTTN-223ENST00000640931 VCX3BQ9H321 246 aa8.71□□□□□ -1.01
RTTN-223ENST00000640931 RPAP3Q9H6T3 665 aaPredicted RBP8.71□□□□□ -1.01
RTTN-223ENST00000640931 GGA1Q9UJY5 639 aa8.71□□□□□ -1.01
RTTN-223ENST00000640931 RCOR1Q9UKL0 485 aa8.71□□□□□ -1.01
RTTN-223ENST00000640931 WDR19Q8NEZ3 1342 aa8.71□□□□□ -1.02
RTTN-223ENST00000640931 MYH2Q9UKX2 1941 aa8.71□□□□□ -1.02
RTTN-223ENST00000640931 BTBD18B2RXH4 712 aa8.71□□□□□ -1.02
RTTN-223ENST00000640931 WNT7AO00755 349 aa8.71□□□□□ -1.02
RTTN-223ENST00000640931 PPEF1O14829 653 aaPredicted RBP8.71□□□□□ -1.02
RTTN-223ENST00000640931 ATMINO43313 823 aaPredicted RBP8.71□□□□□ -1.02
RTTN-223ENST00000640931 DNAJC8O75937 253 aaPredicted RBP8.71□□□□□ -1.02
RTTN-223ENST00000640931 SFPQP23246 707 aaKnown RBP eCLIP8.71□□□□□ -1.02
RTTN-223ENST00000640931 CHRNA5P30532 468 aa8.71□□□□□ -1.02
RTTN-223ENST00000640931 CCT6AP40227 531 aaKnown RBP8.71□□□□□ -1.02
RTTN-223ENST00000640931 ME1P48163 572 aa8.71□□□□□ -1.02
RTTN-223ENST00000640931 GTF2IP78347 998 aa8.71□□□□□ -1.02
RTTN-223ENST00000640931 NR5A1Q13285 461 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms