RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 CLIC6Q96NY7 704 aa10.28□□□□□ -0.76
SCARB2-225ENST00000640900 TEKT3Q9BXF9 490 aa10.28□□□□□ -0.76
SCARB2-225ENST00000640900 CSRNP2Q9H175 543 aa10.28□□□□□ -0.76
SCARB2-225ENST00000640900 UPF3AQ9H1J1 476 aaKnown RBP10.28□□□□□ -0.76
SCARB2-225ENST00000640900 UNC45AQ9H3U1 944 aa10.28□□□□□ -0.76
SCARB2-225ENST00000640900 HPSEQ9Y251 543 aa10.28□□□□□ -0.76
SCARB2-225ENST00000640900 TELO2Q9Y4R8 837 aa10.28□□□□□ -0.76
SCARB2-225ENST00000640900 GSTTP1A0A1W2PQM5 241 aa10.27□□□□□ -0.77
SCARB2-225ENST00000640900 VWA3AA6NCI4 1184 aa10.27□□□□□ -0.77
SCARB2-225ENST00000640900 A6NJR5 290 aa10.27□□□□□ -0.77
SCARB2-225ENST00000640900 GAS7O60861 476 aa10.27□□□□□ -0.77
SCARB2-225ENST00000640900 DUSP11O75319 330 aaKnown RBP10.27□□□□□ -0.77
SCARB2-225ENST00000640900 LGR5O75473 907 aa10.27□□□□□ -0.77
SCARB2-225ENST00000640900 LYPLA2O95372 231 aa10.27□□□□□ -0.77
SCARB2-225ENST00000640900 GGPS1O95749 300 aa10.27□□□□□ -0.77
SCARB2-225ENST00000640900 SPATA31C1P0DKV0 1188 aa10.27□□□□□ -0.77
SCARB2-225ENST00000640900 TXNP10599 105 aaKnown RBP10.27□□□□□ -0.77
SCARB2-225ENST00000640900 AKR1A1P14550 325 aa10.27□□□□□ -0.77
SCARB2-225ENST00000640900 MUTP22033 750 aa10.27□□□□□ -0.77
SCARB2-225ENST00000640900 SFNP31947 248 aa10.27□□□□□ -0.77
SCARB2-225ENST00000640900 MCM4P33991 863 aa10.27□□□□□ -0.77
SCARB2-225ENST00000640900 TECP42680 631 aa10.27□□□□□ -0.77
SCARB2-225ENST00000640900 ME1P48163 572 aa10.27□□□□□ -0.77
SCARB2-225ENST00000640900 CLCN6P51797 869 aa10.27□□□□□ -0.77
SCARB2-225ENST00000640900 TNFAIP2Q03169 654 aa10.27□□□□□ -0.77
SCARB2-225ENST00000640900 LAMC2Q13753 1193 aa10.27□□□□□ -0.77
SCARB2-225ENST00000640900 EPHA7Q15375 998 aa10.27□□□□□ -0.77
SCARB2-225ENST00000640900 CSPP1Q1MSJ5 1256 aa10.27□□□□□ -0.77
SCARB2-225ENST00000640900 FBXO46Q6PJ61 603 aaPredicted RBP10.27□□□□□ -0.77
SCARB2-225ENST00000640900 ABHD15Q6UXT9 468 aa10.27□□□□□ -0.77
SCARB2-225ENST00000640900 SMAP1Q8IYB5 467 aaPredicted RBP10.27□□□□□ -0.77
SCARB2-225ENST00000640900 KCTD17Q8N5Z5 321 aa10.27□□□□□ -0.77
SCARB2-225ENST00000640900 ENGASEQ8NFI3 743 aa10.27□□□□□ -0.77
SCARB2-225ENST00000640900 PPTC7Q8NI37 304 aa10.27□□□□□ -0.77
SCARB2-225ENST00000640900 COPS5Q92905 334 aa10.27□□□□□ -0.77
SCARB2-225ENST00000640900 ARMC5Q96C12 935 aa10.27□□□□□ -0.77
SCARB2-225ENST00000640900 POLR3CQ9BUI4 534 aaPredicted RBP10.27□□□□□ -0.77
SCARB2-225ENST00000640900 JPH1Q9HDC5 661 aaPredicted RBP10.27□□□□□ -0.77
SCARB2-225ENST00000640900 SLC9A2Q9UBY0 812 aa10.27□□□□□ -0.77
SCARB2-225ENST00000640900 FAM184BQ9ULE4 1060 aa10.27□□□□□ -0.77
SCARB2-225ENST00000640900 DOCK5Q9H7D0 1870 aa10.27□□□□□ -0.77
SCARB2-225ENST00000640900 WDR81Q562E7 1941 aa10.27□□□□□ -0.77
SCARB2-225ENST00000640900 A0A087X0B3 334 aa10.26□□□□□ -0.77
SCARB2-225ENST00000640900 POTEMA6NI47 508 aa10.26□□□□□ -0.77
SCARB2-225ENST00000640900 WDR64B1ANS9 1081 aa10.26□□□□□ -0.77
SCARB2-225ENST00000640900 GADD45BO75293 160 aaPredicted RBP10.26□□□□□ -0.77
SCARB2-225ENST00000640900 STBD1O95210 358 aa10.26□□□□□ -0.77
SCARB2-225ENST00000640900 GH1P01241 217 aa10.26□□□□□ -0.77
SCARB2-225ENST00000640900 INHAP05111 366 aa10.26□□□□□ -0.77
SCARB2-225ENST00000640900 NCLP19338 710 aaKnown RBP10.26□□□□□ -0.77
SCARB2-225ENST00000640900 RPA1P27694 616 aa10.26□□□□□ -0.77
SCARB2-225ENST00000640900 CCND3P30281 292 aaPredicted RBP10.26□□□□□ -0.77
SCARB2-225ENST00000640900 GJA9P57773 515 aa10.26□□□□□ -0.77
SCARB2-225ENST00000640900 ACTR2P61160 394 aa10.26□□□□□ -0.77
SCARB2-225ENST00000640900 UBE2HP62256 183 aa10.26□□□□□ -0.77
SCARB2-225ENST00000640900 HSDL1Q3SXM5 330 aa10.26□□□□□ -0.77
SCARB2-225ENST00000640900 GJC2Q5T442 439 aaPredicted RBP10.26□□□□□ -0.77
SCARB2-225ENST00000640900 LHX8Q68G74 356 aa10.26□□□□□ -0.77
SCARB2-225ENST00000640900 CYFIP1Q7L576 1253 aa10.26□□□□□ -0.77
SCARB2-225ENST00000640900 KLHDC9Q8NEP7 349 aa10.26□□□□□ -0.77
SCARB2-225ENST00000640900 AFAP1L1Q8TED9 768 aa10.26□□□□□ -0.77
SCARB2-225ENST00000640900 LRRC15Q8TF66 581 aa10.26□□□□□ -0.77
SCARB2-225ENST00000640900 SYMPKQ92797 1274 aaKnown RBP10.26□□□□□ -0.77
SCARB2-225ENST00000640900 EPSTI1Q96J88 318 aa10.26□□□□□ -0.77
SCARB2-225ENST00000640900 PHF12Q96QT6 1004 aa10.26□□□□□ -0.77
SCARB2-225ENST00000640900 PCYT2Q99447 389 aa10.26□□□□□ -0.77
SCARB2-225ENST00000640900 GPR20Q99678 358 aa10.26□□□□□ -0.77
SCARB2-225ENST00000640900 SDF4Q9BRK5 362 aa10.26□□□□□ -0.77
SCARB2-225ENST00000640900 RAB34Q9BZG1 259 aa10.26□□□□□ -0.77
SCARB2-225ENST00000640900 PAK6Q9NQU5 681 aaPredicted RBP10.26□□□□□ -0.77
SCARB2-225ENST00000640900 ZHX1Q9UKY1 873 aaPredicted RBP10.26□□□□□ -0.77
SCARB2-225ENST00000640900 PCDHA10Q9Y5I2 948 aa10.26□□□□□ -0.77
SCARB2-225ENST00000640900 MAFBQ9Y5Q3 323 aaPredicted RBP10.26□□□□□ -0.77
SCARB2-225ENST00000640900 STK24Q9Y6E0 443 aa10.26□□□□□ -0.77
SCARB2-225ENST00000640900 PP2D1A8MPX8 630 aa10.25□□□□□ -0.77
SCARB2-225ENST00000640900 ADAMTS4O75173 837 aa10.25□□□□□ -0.77
SCARB2-225ENST00000640900 PPFIA4O75335 1185 aa10.25□□□□□ -0.77
SCARB2-225ENST00000640900 PRPF40AO75400 957 aaKnown RBP10.25□□□□□ -0.77
SCARB2-225ENST00000640900 SLITRK3O94933 977 aa10.25□□□□□ -0.77
SCARB2-225ENST00000640900 SUPT20HL2P0C7V6 817 aa10.25□□□□□ -0.77
SCARB2-225ENST00000640900 PTGS1P23219 599 aa10.25□□□□□ -0.77
SCARB2-225ENST00000640900 CST5P28325 142 aaPredicted RBP10.25□□□□□ -0.77
SCARB2-225ENST00000640900 JAK3P52333 1124 aa10.25□□□□□ -0.77
SCARB2-225ENST00000640900 GRB10Q13322 594 aa10.25□□□□□ -0.77
SCARB2-225ENST00000640900 SNW1Q13573 536 aaKnown RBP10.25□□□□□ -0.77
SCARB2-225ENST00000640900 E2F4Q16254 413 aa10.25□□□□□ -0.77
SCARB2-225ENST00000640900 ECM1Q16610 540 aa10.25□□□□□ -0.77
SCARB2-225ENST00000640900 TMEM266Q2M3C6 531 aa10.25□□□□□ -0.77
SCARB2-225ENST00000640900 TMEM119Q4V9L6 283 aa10.25□□□□□ -0.77
SCARB2-225ENST00000640900 NAALADL2Q58DX5 795 aa10.25□□□□□ -0.77
SCARB2-225ENST00000640900 CCSAPQ6IQ19 270 aaPredicted RBP10.25□□□□□ -0.77
SCARB2-225ENST00000640900 CATSPER3Q86XQ3 398 aa10.25□□□□□ -0.77
SCARB2-225ENST00000640900 NEK9Q8TD19 979 aa10.25□□□□□ -0.77
SCARB2-225ENST00000640900 SEPT1Q8WYJ6 367 aa10.25□□□□□ -0.77
SCARB2-225ENST00000640900 PNMA5Q96PV4 448 aa10.25□□□□□ -0.77
SCARB2-225ENST00000640900 UIMC1Q96RL1 719 aa10.25□□□□□ -0.77
SCARB2-225ENST00000640900 EIF2AK1Q9BQI3 630 aaKnown RBP10.25□□□□□ -0.77
SCARB2-225ENST00000640900 GOLPH3LQ9H4A5 285 aa10.25□□□□□ -0.77
SCARB2-225ENST00000640900 TUFT1Q9NNX1 390 aa10.25□□□□□ -0.77
SCARB2-225ENST00000640900 DISC1Q9NRI5 854 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms