RNA–Protein interactions for RNA: ENST00000640880.1

SCARB2-224, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-224ENST00000640880 BEND4Q6ZU67 534 aa8.5□□□□□ -1.05
SCARB2-224ENST00000640880 OTOP1Q7RTM1 612 aa8.5□□□□□ -1.05
SCARB2-224ENST00000640880 AFAP1Q8N556 730 aa8.5□□□□□ -1.05
SCARB2-224ENST00000640880 SCYL1Q96KG9 808 aa8.5□□□□□ -1.05
SCARB2-224ENST00000640880 PTCHD1Q96NR3 888 aa8.5□□□□□ -1.05
SCARB2-224ENST00000640880 KCNJ15Q99712 375 aa8.5□□□□□ -1.05
SCARB2-224ENST00000640880 BOCQ9BWV1 1114 aa8.5□□□□□ -1.05
SCARB2-224ENST00000640880 FOXP3Q9BZS1 431 aa8.5□□□□□ -1.05
SCARB2-224ENST00000640880 TRIT1Q9H3H1 467 aaKnown RBP8.5□□□□□ -1.05
SCARB2-224ENST00000640880 AP5S1Q9NUS5 200 aa8.5□□□□□ -1.05
SCARB2-224ENST00000640880 TCFL5Q9UL49 500 aa8.5□□□□□ -1.05
SCARB2-224ENST00000640880 MRFAP1Q9Y605 127 aa8.5□□□□□ -1.05
SCARB2-224ENST00000640880 TCOF1Q13428 1488 aaKnown RBP8.5□□□□□ -1.05
SCARB2-224ENST00000640880 ZNF644Q9H582 1327 aaPredicted RBP8.5□□□□□ -1.05
SCARB2-224ENST00000640880 MAST1Q9Y2H9 1570 aa8.49□□□□□ -1.05
SCARB2-224ENST00000640880 FGF10O15520 208 aaPredicted RBP8.49□□□□□ -1.05
SCARB2-224ENST00000640880 FKTNO75072 461 aa8.49□□□□□ -1.05
SCARB2-224ENST00000640880 LTFP02788 710 aa8.49□□□□□ -1.05
SCARB2-224ENST00000640880 SCAND1P57086 179 aa8.49□□□□□ -1.05
SCARB2-224ENST00000640880 LSAMPQ13449 338 aa8.49□□□□□ -1.05
SCARB2-224ENST00000640880 ODF1Q14990 250 aa8.49□□□□□ -1.05
SCARB2-224ENST00000640880 USHBP1Q8N6Y0 703 aa8.49□□□□□ -1.05
SCARB2-224ENST00000640880 LINC00116Q8NCU8 138 aa8.49□□□□□ -1.05
SCARB2-224ENST00000640880 MEGF10Q96KG7 1140 aa8.49□□□□□ -1.05
SCARB2-224ENST00000640880 LRGUKQ96M69 825 aa8.49□□□□□ -1.05
SCARB2-224ENST00000640880 NACC1Q96RE7 527 aa8.49□□□□□ -1.05
SCARB2-224ENST00000640880 CDADC1Q9BWV3 514 aa8.49□□□□□ -1.05
SCARB2-224ENST00000640880 ZNF652Q9Y2D9 606 aa8.49□□□□□ -1.05
SCARB2-224ENST00000640880 ATP10AO60312 1499 aa8.49□□□□□ -1.05
SCARB2-224ENST00000640880 REREQ9P2R6 1566 aa8.48□□□□□ -1.05
SCARB2-224ENST00000640880 FER1L4A9Z1Z3 1794 aa8.48□□□□□ -1.05
SCARB2-224ENST00000640880 RTEL1-TNFRSF6BF6WH68 1400 aa8.48□□□□□ -1.05
SCARB2-224ENST00000640880 YEATS2Q9ULM3 1422 aa8.48□□□□□ -1.05
SCARB2-224ENST00000640880 XPOTO43592 962 aaKnown RBP8.48□□□□□ -1.05
SCARB2-224ENST00000640880 TRIM27P14373 513 aa8.48□□□□□ -1.05
SCARB2-224ENST00000640880 PDE6AP16499 860 aa8.48□□□□□ -1.05
SCARB2-224ENST00000640880 KRT15P19012 456 aa8.48□□□□□ -1.05
SCARB2-224ENST00000640880 BCL6P41182 706 aa8.48□□□□□ -1.05
SCARB2-224ENST00000640880 LACTBP83111 547 aaPredicted RBP8.48□□□□□ -1.05
SCARB2-224ENST00000640880 LRRC32Q14392 662 aa8.48□□□□□ -1.05
SCARB2-224ENST00000640880 VPS72Q15906 364 aa8.48□□□□□ -1.05
SCARB2-224ENST00000640880 LCE2CQ5TA81 110 aa8.48□□□□□ -1.05
SCARB2-224ENST00000640880 OGFOD3Q6PK18 319 aa8.48□□□□□ -1.05
SCARB2-224ENST00000640880 EPM2AIP1Q7L775 607 aaPredicted RBP8.48□□□□□ -1.05
SCARB2-224ENST00000640880 TSPYL5Q86VY4 417 aaPredicted RBP8.48□□□□□ -1.05
SCARB2-224ENST00000640880 CMIPQ8IY22 773 aa8.48□□□□□ -1.05
SCARB2-224ENST00000640880 CMTR2Q8IYT2 770 aaKnown RBP8.48□□□□□ -1.05
SCARB2-224ENST00000640880 DZIP1LQ8IYY4 767 aaKnown RBP8.48□□□□□ -1.05
SCARB2-224ENST00000640880 HSPBAP1Q96EW2 488 aa8.48□□□□□ -1.05
SCARB2-224ENST00000640880 TBC1D32Q96NH3 1257 aa8.48□□□□□ -1.05
SCARB2-224ENST00000640880 ANLNQ9NQW6 1124 aa8.48□□□□□ -1.05
SCARB2-224ENST00000640880 CLDND1Q9NY35 253 aa8.48□□□□□ -1.05
SCARB2-224ENST00000640880 RCAN3Q9UKA8 241 aa8.48□□□□□ -1.05
SCARB2-224ENST00000640880 TIMM13Q9Y5L4 95 aaPredicted RBP8.48□□□□□ -1.05
SCARB2-224ENST00000640880 MBD5Q9P267 1494 aa8.48□□□□□ -1.05
SCARB2-224ENST00000640880 SHANK2Q9UPX8 1470 aa8.48□□□□□ -1.05
SCARB2-224ENST00000640880 BCORL1Q5H9F3 1711 aa8.48□□□□□ -1.05
SCARB2-224ENST00000640880 PLXNC1O60486 1568 aa8.48□□□□□ -1.05
SCARB2-224ENST00000640880 DAPK1P53355 1430 aa8.47□□□□□ -1.05
SCARB2-224ENST00000640880 SLC12A8A0AV02 714 aa8.47□□□□□ -1.05
SCARB2-224ENST00000640880 PCDHGA12O60330 932 aa8.47□□□□□ -1.05
SCARB2-224ENST00000640880 ARHGEF15O94989 841 aa8.47□□□□□ -1.05
SCARB2-224ENST00000640880 IL33O95760 270 aa8.47□□□□□ -1.05
SCARB2-224ENST00000640880 NBPF7P0C2Y1 421 aaPredicted RBP8.47□□□□□ -1.05
SCARB2-224ENST00000640880 SLC9A1P19634 815 aa8.47□□□□□ -1.05
SCARB2-224ENST00000640880 LPOP22079 712 aaPredicted RBP8.47□□□□□ -1.05
SCARB2-224ENST00000640880 RPL11P62913 178 aaKnown RBP8.47□□□□□ -1.05
SCARB2-224ENST00000640880 KRT85P78386 507 aa8.47□□□□□ -1.05
SCARB2-224ENST00000640880 GTF2H3Q13889 308 aa8.47□□□□□ -1.05
SCARB2-224ENST00000640880 TERF2Q15554 542 aa8.47□□□□□ -1.05
SCARB2-224ENST00000640880 CDKAL1Q5VV42 579 aa8.47□□□□□ -1.05
SCARB2-224ENST00000640880 OSTM1Q86WC4 334 aa8.47□□□□□ -1.05
SCARB2-224ENST00000640880 AMOTL1Q8IY63 956 aa8.47□□□□□ -1.05
SCARB2-224ENST00000640880 NAT16Q8N8M0 369 aa8.47□□□□□ -1.05
SCARB2-224ENST00000640880 GATA6Q92908 595 aa8.47□□□□□ -1.05
SCARB2-224ENST00000640880 IL17RAQ96F46 866 aa8.47□□□□□ -1.05
SCARB2-224ENST00000640880 ARPC5LQ9BPX5 153 aa8.47□□□□□ -1.05
SCARB2-224ENST00000640880 CDIP1Q9H305 208 aa8.47□□□□□ -1.05
SCARB2-224ENST00000640880 TOPORSQ9NS56 1045 aaPredicted RBP8.47□□□□□ -1.05
SCARB2-224ENST00000640880 PCDHGA9Q9Y5G4 932 aaKnown RBP8.47□□□□□ -1.05
SCARB2-224ENST00000640880 PCDHGA8Q9Y5G5 932 aa8.47□□□□□ -1.05
SCARB2-224ENST00000640880 PCDHGA7Q9Y5G6 932 aa8.47□□□□□ -1.05
SCARB2-224ENST00000640880 PCDHGA6Q9Y5G7 932 aa8.47□□□□□ -1.05
SCARB2-224ENST00000640880 PCDHGA3Q9Y5H0 932 aa8.47□□□□□ -1.05
SCARB2-224ENST00000640880 PCDHGA2Q9Y5H1 932 aa8.47□□□□□ -1.05
SCARB2-224ENST00000640880 GOLGA8AA7E2F4 631 aa8.46□□□□□ -1.06
SCARB2-224ENST00000640880 GOLGA8BA8MQT2 603 aa8.46□□□□□ -1.06
SCARB2-224ENST00000640880 WASH4PA8MWX3 477 aa8.46□□□□□ -1.06
SCARB2-224ENST00000640880 ZNF561-AS1K7EIQ3 104 aa8.46□□□□□ -1.06
SCARB2-224ENST00000640880 WIPF1O43516 503 aa8.46□□□□□ -1.06
SCARB2-224ENST00000640880 H2AFYO75367 372 aaKnown RBP8.46□□□□□ -1.06
SCARB2-224ENST00000640880 IFIT2P09913 472 aaKnown RBP8.46□□□□□ -1.06
SCARB2-224ENST00000640880 ADMP35318 185 aa8.46□□□□□ -1.06
SCARB2-224ENST00000640880 PDE6BP35913 854 aa8.46□□□□□ -1.06
SCARB2-224ENST00000640880 JAM2P57087 298 aa8.46□□□□□ -1.06
SCARB2-224ENST00000640880 IRF9Q00978 393 aa8.46□□□□□ -1.06
SCARB2-224ENST00000640880 MBTPS1Q14703 1052 aa8.46□□□□□ -1.06
SCARB2-224ENST00000640880 ZNF174Q15697 407 aa8.46□□□□□ -1.06
SCARB2-224ENST00000640880 CLUL1Q15846 466 aa8.46□□□□□ -1.06
SCARB2-224ENST00000640880 CYP27C1Q4G0S4 372 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms