RNA–Protein interactions for RNA: ENST00000640872.1

PAX6-280, Transcript of paired box 6, humanhuman

TSL 1 (best)

Gene PAX6, Length 2,367 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-280ENST00000640872 ZKSCAN4Q969J2 545 aaPredicted RBP15.03■□□□□ -0
PAX6-280ENST00000640872 NUDT12Q9BQG2 462 aa15.03■□□□□ -0
PAX6-280ENST00000640872 JPH2Q9BR39 696 aaPredicted RBP15.03■□□□□ -0
PAX6-280ENST00000640872 CD248Q9HCU0 757 aa15.03■□□□□ -0
PAX6-280ENST00000640872 PPANQ9NQ55 473 aaKnown RBP15.03■□□□□ -0
PAX6-280ENST00000640872 BIN2Q9UBW5 565 aaPredicted RBP15.03■□□□□ -0
PAX6-280ENST00000640872 ESYT2A0FGR8 921 aa15.02■□□□□ -0
PAX6-280ENST00000640872 POTEMA6NI47 508 aa15.02■□□□□ -0
PAX6-280ENST00000640872 SLC37A4O43826 429 aa15.02■□□□□ -0
PAX6-280ENST00000640872 EDIL3O43854 480 aa15.02■□□□□ -0
PAX6-280ENST00000640872 HSPA1LP34931 641 aa15.02■□□□□ -0
PAX6-280ENST00000640872 RAPGEF1Q13905 1077 aa15.02■□□□□ -0
PAX6-280ENST00000640872 HLTFQ14527 1009 aaKnown RBP eCLIP15.02■□□□□ -0
PAX6-280ENST00000640872 SOGA3Q5TF21 947 aa15.02■□□□□ -0
PAX6-280ENST00000640872 TRIM59Q8IWR1 403 aa15.02■□□□□ -0
PAX6-280ENST00000640872 REXO1Q8N1G1 1221 aaKnown RBP15.02■□□□□ -0
PAX6-280ENST00000640872 CEP63Q96MT8 703 aa15.02■□□□□ -0
PAX6-280ENST00000640872 TMEM260Q9NX78 707 aa15.02■□□□□ -0
PAX6-280ENST00000640872 ADAMTS1Q9UHI8 967 aa15.02■□□□□ -0
PAX6-280ENST00000640872 NAV1Q8NEY1 1877 aa15.02□□□□□ -0.01
PAX6-280ENST00000640872 GMNCA6NCL1 334 aa15.02□□□□□ -0.01
PAX6-280ENST00000640872 TRAF5O00463 557 aa15.02□□□□□ -0.01
PAX6-280ENST00000640872 KCNK3O14649 394 aa15.02□□□□□ -0.01
PAX6-280ENST00000640872 GNPATO15228 680 aa15.02□□□□□ -0.01
PAX6-280ENST00000640872 TRAPPC3O43617 180 aa15.02□□□□□ -0.01
PAX6-280ENST00000640872 KIF4AO95239 1232 aa15.02□□□□□ -0.01
PAX6-280ENST00000640872 ZBTB48P10074 688 aaPredicted RBP15.02□□□□□ -0.01
PAX6-280ENST00000640872 RASA1P20936 1047 aa15.02□□□□□ -0.01
PAX6-280ENST00000640872 USP11P51784 963 aa15.02□□□□□ -0.01
PAX6-280ENST00000640872 MARSP56192 900 aaKnown RBP15.02□□□□□ -0.01
PAX6-280ENST00000640872 KLHL30Q0D2K2 578 aa15.02□□□□□ -0.01
PAX6-280ENST00000640872 COASYQ13057 564 aa15.02□□□□□ -0.01
PAX6-280ENST00000640872 BIRC3Q13489 604 aa15.02□□□□□ -0.01
PAX6-280ENST00000640872 RPS6KA1Q15418 735 aa15.02□□□□□ -0.01
PAX6-280ENST00000640872 TMEM266Q2M3C6 531 aa15.02□□□□□ -0.01
PAX6-280ENST00000640872 DZIP1Q86YF9 867 aaKnown RBP15.02□□□□□ -0.01
PAX6-280ENST00000640872 ZNF444Q8N0Y2 327 aaPredicted RBP15.02□□□□□ -0.01
PAX6-280ENST00000640872 OR2W6PQ8NHA6 318 aa15.02□□□□□ -0.01
PAX6-280ENST00000640872 ACTRT1Q8TDG2 376 aa15.02□□□□□ -0.01
PAX6-280ENST00000640872 SNX29Q8TEQ0 813 aa15.02□□□□□ -0.01
PAX6-280ENST00000640872 TAF4BQ92750 862 aa15.02□□□□□ -0.01
PAX6-280ENST00000640872 LRRC45Q96CN5 670 aa15.02□□□□□ -0.01
PAX6-280ENST00000640872 DNAJC19Q96DA6 116 aa15.02□□□□□ -0.01
PAX6-280ENST00000640872 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.02□□□□□ -0.01
PAX6-280ENST00000640872 LRRC27Q9C0I9 530 aa15.02□□□□□ -0.01
PAX6-280ENST00000640872 NEUROG2Q9H2A3 272 aa15.02□□□□□ -0.01
PAX6-280ENST00000640872 GANQ9H2C0 597 aa15.02□□□□□ -0.01
PAX6-280ENST00000640872 ACTR5Q9H9F9 607 aaPredicted RBP15.02□□□□□ -0.01
PAX6-280ENST00000640872 SLC40A1Q9NP59 571 aa15.02□□□□□ -0.01
PAX6-280ENST00000640872 DDX20Q9UHI6 824 aaKnown RBP15.02□□□□□ -0.01
PAX6-280ENST00000640872 MYH4Q9Y623 1939 aa15.01□□□□□ -0.01
PAX6-280ENST00000640872 SNED1Q8TER0 1413 aa15.01□□□□□ -0.01
PAX6-280ENST00000640872 PDIA5Q14554 519 aa15.01□□□□□ -0.01
PAX6-280ENST00000640872 FAM133AQ8N9E0 248 aa15.01□□□□□ -0.01
PAX6-280ENST00000640872 SH3RF3Q8TEJ3 882 aaPredicted RBP15.01□□□□□ -0.01
PAX6-280ENST00000640872 PBKQ96KB5 322 aa15.01□□□□□ -0.01
PAX6-280ENST00000640872 USP21Q9UK80 565 aa15.01□□□□□ -0.01
PAX6-280ENST00000640872 C5orf60A6NFR6 353 aa15□□□□□ -0.01
PAX6-280ENST00000640872 TDP2O95551 362 aa15□□□□□ -0.01
PAX6-280ENST00000640872 PAEPP09466 180 aa15□□□□□ -0.01
PAX6-280ENST00000640872 ASIC2Q16515 512 aa15□□□□□ -0.01
PAX6-280ENST00000640872 LRRC57Q8N9N7 239 aa15□□□□□ -0.01
PAX6-280ENST00000640872 CALR3Q96L12 384 aaKnown RBP15□□□□□ -0.01
PAX6-280ENST00000640872 TACO1Q9BSH4 297 aaKnown RBP15□□□□□ -0.01
PAX6-280ENST00000640872 OSBPL7Q9BZF2 842 aa15□□□□□ -0.01
PAX6-280ENST00000640872 JAG2Q9Y219 1238 aa15□□□□□ -0.01
PAX6-280ENST00000640872 GNA14O95837 355 aa15□□□□□ -0.01
PAX6-280ENST00000640872 CTNNA1P35221 906 aaKnown RBP15□□□□□ -0.01
PAX6-280ENST00000640872 ARID5AQ03989 594 aa15□□□□□ -0.01
PAX6-280ENST00000640872 ECM1Q16610 540 aa15□□□□□ -0.01
PAX6-280ENST00000640872 QPCTQ16769 361 aa15□□□□□ -0.01
PAX6-280ENST00000640872 SPRED3Q2MJR0 410 aa15□□□□□ -0.01
PAX6-280ENST00000640872 AGBL2Q5U5Z8 902 aa15□□□□□ -0.01
PAX6-280ENST00000640872 KRT79Q5XKE5 535 aa15□□□□□ -0.01
PAX6-280ENST00000640872 RUFY4Q6ZNE9 571 aa15□□□□□ -0.01
PAX6-280ENST00000640872 CCDC121Q6ZUS5 278 aa15□□□□□ -0.01
PAX6-280ENST00000640872 DDX42Q86XP3 938 aaKnown RBP eCLIP15□□□□□ -0.01
PAX6-280ENST00000640872 PIGSQ96S52 555 aa15□□□□□ -0.01
PAX6-280ENST00000640872 RAB34Q9BZG1 259 aa15□□□□□ -0.01
PAX6-280ENST00000640872 CENPHQ9H3R5 247 aa15□□□□□ -0.01
PAX6-280ENST00000640872 SEC63Q9UGP8 760 aaKnown RBP15□□□□□ -0.01
PAX6-280ENST00000640872 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15□□□□□ -0.01
PAX6-280ENST00000640872 CCDC172P0C7W6 258 aa14.99□□□□□ -0.01
PAX6-280ENST00000640872 SMARCA1P28370 1054 aa14.99□□□□□ -0.01
PAX6-280ENST00000640872 SEPT2Q15019 361 aa14.99□□□□□ -0.01
PAX6-280ENST00000640872 PREPLQ4J6C6 727 aaPredicted RBP14.99□□□□□ -0.01
PAX6-280ENST00000640872 FAM26FQ5R3K3 315 aa14.99□□□□□ -0.01
PAX6-280ENST00000640872 USP17L2Q6R6M4 530 aa14.99□□□□□ -0.01
PAX6-280ENST00000640872 FGFBP2Q9BYJ0 223 aa14.99□□□□□ -0.01
PAX6-280ENST00000640872 CNOT8Q9UFF9 292 aaKnown RBP14.99□□□□□ -0.01
PAX6-280ENST00000640872 TMOD1P28289 359 aa14.99□□□□□ -0.01
PAX6-280ENST00000640872 PPP2R2AP63151 447 aa14.99□□□□□ -0.01
PAX6-280ENST00000640872 BYSLQ13895 437 aaKnown RBP14.99□□□□□ -0.01
PAX6-280ENST00000640872 ANKRD20A8PQ5CZ79 823 aa14.99□□□□□ -0.01
PAX6-280ENST00000640872 C10orf76Q5T2E6 689 aa14.99□□□□□ -0.01
PAX6-280ENST00000640872 SPTY2D1Q68D10 685 aaPredicted RBP14.99□□□□□ -0.01
PAX6-280ENST00000640872 ZC3H3Q8IXZ2 948 aaKnown RBP14.99□□□□□ -0.01
PAX6-280ENST00000640872 KANSL2Q9H9L4 492 aa14.99□□□□□ -0.01
PAX6-280ENST00000640872 FBXL5Q9UKA1 691 aa14.99□□□□□ -0.01
PAX6-280ENST00000640872 KIF13BQ9NQT8 1826 aa14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms