RNA–Protein interactions for RNA: ENST00000640218.1

HNRNPU-226, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HNRNPU, Length 6,858 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-226ENST00000640218 NHEJ1Q9H9Q4 299 aaPredicted RBP15.93■□□□□ 0.14
HNRNPU-226ENST00000640218 RASGRF1Q13972 1273 aa15.93■□□□□ 0.14
HNRNPU-226ENST00000640218 SUSD4Q5VX71 490 aa15.93■□□□□ 0.14
HNRNPU-226ENST00000640218 MYLK4Q86YV6 388 aaPredicted RBP15.93■□□□□ 0.14
HNRNPU-226ENST00000640218 FAM81BQ96LP2 452 aa15.93■□□□□ 0.14
HNRNPU-226ENST00000640218 USP6P35125 1406 aa15.93■□□□□ 0.14
HNRNPU-226ENST00000640218 ECEL1O95672 775 aa15.93■□□□□ 0.14
HNRNPU-226ENST00000640218 CTTNQ14247 550 aaKnown RBP15.93■□□□□ 0.14
HNRNPU-226ENST00000640218 RCN2Q14257 317 aa15.93■□□□□ 0.14
HNRNPU-226ENST00000640218 PDXDC2PQ6P474 469 aa15.93■□□□□ 0.14
HNRNPU-226ENST00000640218 RAB44Q7Z6P3 723 aaPredicted RBP15.93■□□□□ 0.14
HNRNPU-226ENST00000640218 PAGE5Q96GU1 130 aa15.93■□□□□ 0.14
HNRNPU-226ENST00000640218 SPZ1Q9BXG8 430 aa15.93■□□□□ 0.14
HNRNPU-226ENST00000640218 MRPL47Q9HD33 250 aaKnown RBP15.93■□□□□ 0.14
HNRNPU-226ENST00000640218 CPSF3Q9UKF6 684 aaKnown RBP15.93■□□□□ 0.14
HNRNPU-226ENST00000640218 RCOR1Q9UKL0 485 aa15.93■□□□□ 0.14
HNRNPU-226ENST00000640218 SYNMO15061 1565 aa15.93■□□□□ 0.14
HNRNPU-226ENST00000640218 PGRMC1O00264 195 aaKnown RBP15.93■□□□□ 0.14
HNRNPU-226ENST00000640218 LIG3P49916 1009 aa15.93■□□□□ 0.14
HNRNPU-226ENST00000640218 SCARA5Q6ZMJ2 495 aa15.93■□□□□ 0.14
HNRNPU-226ENST00000640218 CHMP6Q96FZ7 201 aa15.93■□□□□ 0.14
HNRNPU-226ENST00000640218 PNMA6FA0A0J9YX94 578 aa15.92■□□□□ 0.14
HNRNPU-226ENST00000640218 MYL1P05976 194 aa15.92■□□□□ 0.14
HNRNPU-226ENST00000640218 EIF4A3P38919 411 aaKnown RBP15.92■□□□□ 0.14
HNRNPU-226ENST00000640218 ARL4AP40617 200 aa15.92■□□□□ 0.14
HNRNPU-226ENST00000640218 BASP1P80723 227 aaKnown RBP15.92■□□□□ 0.14
HNRNPU-226ENST00000640218 OR6B2Q6IFH4 312 aa15.92■□□□□ 0.14
HNRNPU-226ENST00000640218 PIGBQ92521 554 aa15.92■□□□□ 0.14
HNRNPU-226ENST00000640218 ATP6V1E2Q96A05 226 aa15.92■□□□□ 0.14
HNRNPU-226ENST00000640218 LRGUKQ96M69 825 aa15.92■□□□□ 0.14
HNRNPU-226ENST00000640218 USH1CQ9Y6N9 552 aa15.92■□□□□ 0.14
HNRNPU-226ENST00000640218 LARGE1O95461 756 aa15.92■□□□□ 0.14
HNRNPU-226ENST00000640218 EIF2AK2P19525 551 aaKnown RBP15.92■□□□□ 0.14
HNRNPU-226ENST00000640218 TMED2Q15363 201 aa15.92■□□□□ 0.14
HNRNPU-226ENST00000640218 TRMT2AQ8IZ69 625 aaKnown RBP15.92■□□□□ 0.14
HNRNPU-226ENST00000640218 LRRC4Q9HBW1 653 aa15.92■□□□□ 0.14
HNRNPU-226ENST00000640218 SLC12A6Q9UHW9 1150 aa15.92■□□□□ 0.14
HNRNPU-226ENST00000640218 GOLGA8IPA6NC78 632 aa15.92■□□□□ 0.14
HNRNPU-226ENST00000640218 GOLGA8JA6NMD2 632 aa15.92■□□□□ 0.14
HNRNPU-226ENST00000640218 SPATS2Q86XZ4 545 aaKnown RBP15.92■□□□□ 0.14
HNRNPU-226ENST00000640218 SPTLC3Q9NUV7 552 aa15.92■□□□□ 0.14
HNRNPU-226ENST00000640218 PPME1Q9Y570 386 aa15.92■□□□□ 0.14
HNRNPU-226ENST00000640218 SUN1O94901 812 aa15.92■□□□□ 0.14
HNRNPU-226ENST00000640218 KIAA1841Q6NSI8 718 aa15.92■□□□□ 0.14
HNRNPU-226ENST00000640218 THAP9Q9H5L6 903 aa15.92■□□□□ 0.14
HNRNPU-226ENST00000640218 MSH2P43246 934 aa15.92■□□□□ 0.14
HNRNPU-226ENST00000640218 GRAPQ13588 217 aa15.92■□□□□ 0.14
HNRNPU-226ENST00000640218 GRAPLQ8TC17 118 aaPredicted RBP15.92■□□□□ 0.14
HNRNPU-226ENST00000640218 CLASP1Q7Z460 1538 aa15.91■□□□□ 0.14
HNRNPU-226ENST00000640218 CCT5P48643 541 aa15.91■□□□□ 0.14
HNRNPU-226ENST00000640218 IL1RL1Q01638 556 aa15.91■□□□□ 0.14
HNRNPU-226ENST00000640218 MYO1EQ12965 1108 aa15.91■□□□□ 0.14
HNRNPU-226ENST00000640218 ARHGEF18Q6ZSZ5 1173 aa15.91■□□□□ 0.14
HNRNPU-226ENST00000640218 ERVK-7P63135 1459 aa15.91■□□□□ 0.14
HNRNPU-226ENST00000640218 SERPING1P05155 500 aa15.91■□□□□ 0.14
HNRNPU-226ENST00000640218 MXI1P50539 228 aa15.91■□□□□ 0.14
HNRNPU-226ENST00000640218 PDZD8Q8NEN9 1154 aa15.91■□□□□ 0.14
HNRNPU-226ENST00000640218 JRKLQ9Y4A0 524 aa15.91■□□□□ 0.14
HNRNPU-226ENST00000640218 SASH1O94885 1247 aa15.91■□□□□ 0.14
HNRNPU-226ENST00000640218 PSMD2Q13200 908 aa15.91■□□□□ 0.14
HNRNPU-226ENST00000640218 LRRC43Q8N309 656 aa15.91■□□□□ 0.14
HNRNPU-226ENST00000640218 SDCCAG3Q96C92 435 aa15.91■□□□□ 0.14
HNRNPU-226ENST00000640218 HEXIM2Q96MH2 286 aaKnown RBP15.91■□□□□ 0.14
HNRNPU-226ENST00000640218 NPHP4O75161 1426 aaPredicted RBP15.91■□□□□ 0.14
HNRNPU-226ENST00000640218 KIF1BO60333 1816 aa15.91■□□□□ 0.14
HNRNPU-226ENST00000640218 PLEKHA8P1O95397 391 aa15.91■□□□□ 0.14
HNRNPU-226ENST00000640218 ABCD1P33897 745 aa15.91■□□□□ 0.14
HNRNPU-226ENST00000640218 EPHB4P54760 987 aa15.91■□□□□ 0.14
HNRNPU-226ENST00000640218 TRIP13Q15645 432 aaPredicted RBP15.91■□□□□ 0.14
HNRNPU-226ENST00000640218 LBHD1Q9BQE6 289 aaPredicted RBP15.91■□□□□ 0.14
HNRNPU-226ENST00000640218 COG7P83436 770 aa15.91■□□□□ 0.14
HNRNPU-226ENST00000640218 GANCQ8TET4 914 aa15.91■□□□□ 0.14
HNRNPU-226ENST00000640218 CCNE1P24864 410 aa15.9■□□□□ 0.14
HNRNPU-226ENST00000640218 ZKSCAN8Q15776 578 aaPredicted RBP15.9■□□□□ 0.14
HNRNPU-226ENST00000640218 NLRP4Q96MN2 994 aa15.9■□□□□ 0.14
HNRNPU-226ENST00000640218 ZNF341Q9BYN7 854 aa15.9■□□□□ 0.14
HNRNPU-226ENST00000640218 PCDHA13Q9Y5I0 950 aa15.9■□□□□ 0.14
HNRNPU-226ENST00000640218 SFI1A8K8P3 1242 aa15.9■□□□□ 0.14
HNRNPU-226ENST00000640218 CLGNO14967 610 aa15.9■□□□□ 0.14
HNRNPU-226ENST00000640218 SLC12A1Q13621 1099 aa15.9■□□□□ 0.14
HNRNPU-226ENST00000640218 IQCB1Q15051 598 aa15.9■□□□□ 0.14
HNRNPU-226ENST00000640218 TCP11X2Q5H9J9 407 aa15.9■□□□□ 0.14
HNRNPU-226ENST00000640218 FAM160B2Q86V87 743 aa15.9■□□□□ 0.14
HNRNPU-226ENST00000640218 PARD3BQ8TEW8 1205 aa15.9■□□□□ 0.14
HNRNPU-226ENST00000640218 BSDC1Q9NW68 430 aaPredicted RBP15.9■□□□□ 0.14
HNRNPU-226ENST00000640218 CUL4AQ13619 759 aa15.9■□□□□ 0.14
HNRNPU-226ENST00000640218 SEPT2Q15019 361 aa15.9■□□□□ 0.14
HNRNPU-226ENST00000640218 RPF1Q9H9Y2 349 aaKnown RBP15.9■□□□□ 0.14
HNRNPU-226ENST00000640218 UBN1Q9NPG3 1134 aa15.9■□□□□ 0.14
HNRNPU-226ENST00000640218 TBK1Q9UHD2 729 aa15.9■□□□□ 0.14
HNRNPU-226ENST00000640218 ZNF233A6NK53 670 aa15.9■□□□□ 0.14
HNRNPU-226ENST00000640218 Q9H521 79 aa15.9■□□□□ 0.14
HNRNPU-226ENST00000640218 FIS1Q9Y3D6 152 aa15.9■□□□□ 0.14
HNRNPU-226ENST00000640218 ERBB3P21860 1342 aa15.9■□□□□ 0.14
HNRNPU-226ENST00000640218 UGGT1Q9NYU2 1555 aa15.9■□□□□ 0.14
HNRNPU-226ENST00000640218 NPR1P16066 1061 aa15.9■□□□□ 0.14
HNRNPU-226ENST00000640218 RESTQ13127 1097 aa15.9■□□□□ 0.14
HNRNPU-226ENST00000640218 ENOX1Q8TC92 643 aaKnown RBP15.9■□□□□ 0.14
HNRNPU-226ENST00000640218 SPDL1Q96EA4 605 aa15.9■□□□□ 0.14
HNRNPU-226ENST00000640218 HAUS8Q9BT25 410 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms