RNA–Protein interactions for RNA: ENST00000638848.1

KCNMA1-246, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 4,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-246ENST00000638848 COASYQ13057 564 aa12.48□□□□□ -0.41
KCNMA1-246ENST00000638848 SHROOM1Q2M3G4 852 aaPredicted RBP12.48□□□□□ -0.41
KCNMA1-246ENST00000638848 MXD3Q9BW11 206 aa12.48□□□□□ -0.41
KCNMA1-246ENST00000638848 CTDP1Q9Y5B0 961 aaPredicted RBP12.48□□□□□ -0.41
KCNMA1-246ENST00000638848 GRID2IPA4D2P6 1211 aa12.47□□□□□ -0.41
KCNMA1-246ENST00000638848 NR2F2P24468 414 aa12.47□□□□□ -0.41
KCNMA1-246ENST00000638848 MDH1P40925 334 aaKnown RBP12.47□□□□□ -0.41
KCNMA1-246ENST00000638848 UBXN2AP68543 259 aa12.47□□□□□ -0.41
KCNMA1-246ENST00000638848 KCNA1Q09470 495 aa12.47□□□□□ -0.41
KCNMA1-246ENST00000638848 PEX26Q7Z412 305 aa12.47□□□□□ -0.41
KCNMA1-246ENST00000638848 CCDC84Q86UT8 332 aaPredicted RBP12.47□□□□□ -0.41
KCNMA1-246ENST00000638848 ATP6V1G3Q96LB4 118 aa12.47□□□□□ -0.41
KCNMA1-246ENST00000638848 ERGIC2Q96RQ1 377 aa12.47□□□□□ -0.41
KCNMA1-246ENST00000638848 OSGEPQ9NPF4 335 aa12.47□□□□□ -0.41
KCNMA1-246ENST00000638848 PKD2L1Q9P0L9 805 aa12.47□□□□□ -0.41
KCNMA1-246ENST00000638848 COL4A3BPQ9Y5P4 624 aa12.47□□□□□ -0.41
KCNMA1-246ENST00000638848 CLTAP09496 248 aa12.47□□□□□ -0.41
KCNMA1-246ENST00000638848 CASP5P51878 434 aa12.47□□□□□ -0.41
KCNMA1-246ENST00000638848 CACNB3P54284 484 aa12.47□□□□□ -0.41
KCNMA1-246ENST00000638848 DDB1Q16531 1140 aa12.47□□□□□ -0.41
KCNMA1-246ENST00000638848 B4GALNT4Q76KP1 1039 aa12.47□□□□□ -0.41
KCNMA1-246ENST00000638848 CCDC91Q7Z6B0 441 aa12.47□□□□□ -0.41
KCNMA1-246ENST00000638848 CCSER1Q9C0I3 900 aa12.47□□□□□ -0.41
KCNMA1-246ENST00000638848 SLC24A3Q9HC58 644 aa12.47□□□□□ -0.41
KCNMA1-246ENST00000638848 CNOT8Q9UFF9 292 aaKnown RBP12.47□□□□□ -0.41
KCNMA1-246ENST00000638848 ZNF804BA4D1E1 1349 aa12.47□□□□□ -0.41
KCNMA1-246ENST00000638848 BTDP43251 543 aa12.47□□□□□ -0.41
KCNMA1-246ENST00000638848 PLTPP55058 493 aa12.47□□□□□ -0.41
KCNMA1-246ENST00000638848 C12orf60Q5U649 245 aa12.47□□□□□ -0.41
KCNMA1-246ENST00000638848 PIK3R5Q8WYR1 880 aa12.47□□□□□ -0.41
KCNMA1-246ENST00000638848 N4BP2L2Q92802 583 aaPredicted RBP12.47□□□□□ -0.41
KCNMA1-246ENST00000638848 SH3GL2Q99962 352 aa12.47□□□□□ -0.41
KCNMA1-246ENST00000638848 SH2D3AQ9BRG2 576 aa12.47□□□□□ -0.41
KCNMA1-246ENST00000638848 TMOD4Q9NZQ9 345 aa12.47□□□□□ -0.41
KCNMA1-246ENST00000638848 ERVV-1B6SEH8 477 aa12.46□□□□□ -0.41
KCNMA1-246ENST00000638848 SART1O43290 800 aaKnown RBP12.46□□□□□ -0.41
KCNMA1-246ENST00000638848 UPP2O95045 317 aa12.46□□□□□ -0.41
KCNMA1-246ENST00000638848 HGSNATQ68CP4 663 aa12.46□□□□□ -0.41
KCNMA1-246ENST00000638848 MRRFQ96E11 262 aaKnown RBP12.46□□□□□ -0.41
KCNMA1-246ENST00000638848 CYFIP2Q96F07 1278 aa12.46□□□□□ -0.41
KCNMA1-246ENST00000638848 NCAPGQ9BPX3 1015 aa12.46□□□□□ -0.41
KCNMA1-246ENST00000638848 EPN3Q9H201 632 aa12.46□□□□□ -0.41
KCNMA1-246ENST00000638848 CXorf56Q9H5V9 222 aa12.46□□□□□ -0.41
KCNMA1-246ENST00000638848 PNMA2Q9UL42 364 aa12.46□□□□□ -0.41
KCNMA1-246ENST00000638848 SHOX2O60902 331 aaPredicted RBP12.46□□□□□ -0.41
KCNMA1-246ENST00000638848 CDK8P49336 464 aa12.46□□□□□ -0.41
KCNMA1-246ENST00000638848 GRM4Q14833 912 aa12.46□□□□□ -0.41
KCNMA1-246ENST00000638848 ECM29Q5VYK3 1845 aa12.46□□□□□ -0.41
KCNMA1-246ENST00000638848 VIMP08670 466 aaKnown RBP12.46□□□□□ -0.41
KCNMA1-246ENST00000638848 MYBL1P10243 752 aa12.46□□□□□ -0.41
KCNMA1-246ENST00000638848 GNA11P29992 359 aa12.46□□□□□ -0.41
KCNMA1-246ENST00000638848 TNNC1P63316 161 aa12.46□□□□□ -0.41
KCNMA1-246ENST00000638848 KCNH2Q12809 1159 aa12.46□□□□□ -0.41
KCNMA1-246ENST00000638848 UBE4AQ14139 1066 aa12.46□□□□□ -0.41
KCNMA1-246ENST00000638848 PPP1R7Q15435 360 aa12.46□□□□□ -0.41
KCNMA1-246ENST00000638848 DPP8Q6V1X1 898 aaPredicted RBP12.46□□□□□ -0.41
KCNMA1-246ENST00000638848 KRT25Q7Z3Z0 450 aa12.46□□□□□ -0.41
KCNMA1-246ENST00000638848 DDX25Q9UHL0 483 aaKnown RBP12.46□□□□□ -0.41
KCNMA1-246ENST00000638848 ZNF335Q9H4Z2 1342 aaPredicted RBP12.46□□□□□ -0.42
KCNMA1-246ENST00000638848 TAF1P21675 1872 aa12.46□□□□□ -0.42
KCNMA1-246ENST00000638848 PKD1L3Q7Z443 1732 aa12.46□□□□□ -0.42
KCNMA1-246ENST00000638848 RSPH10B2B2RC85 870 aa12.46□□□□□ -0.42
KCNMA1-246ENST00000638848 FGGP02679 453 aa12.46□□□□□ -0.42
KCNMA1-246ENST00000638848 RSPH10BP0C881 870 aa12.46□□□□□ -0.42
KCNMA1-246ENST00000638848 RASA1P20936 1047 aa12.46□□□□□ -0.42
KCNMA1-246ENST00000638848 CASP4P49662 377 aa12.46□□□□□ -0.42
KCNMA1-246ENST00000638848 SCNN1DP51172 638 aa12.46□□□□□ -0.42
KCNMA1-246ENST00000638848 KLC4Q9NSK0 619 aa12.46□□□□□ -0.42
KCNMA1-246ENST00000638848 ATP8A2Q9NTI2 1148 aa12.46□□□□□ -0.42
KCNMA1-246ENST00000638848 SNX24Q9Y343 169 aa12.46□□□□□ -0.42
KCNMA1-246ENST00000638848 NOC2LQ9Y3T9 749 aaKnown RBP12.46□□□□□ -0.42
KCNMA1-246ENST00000638848 COL5A2P05997 1499 aaPredicted RBP12.46□□□□□ -0.42
KCNMA1-246ENST00000638848 VPS41P49754 854 aa12.45□□□□□ -0.42
KCNMA1-246ENST00000638848 PSMC6P62333 389 aa12.45□□□□□ -0.42
KCNMA1-246ENST00000638848 TCP10Q12799 353 aa12.45□□□□□ -0.42
KCNMA1-246ENST00000638848 ALS2CLQ60I27 953 aa12.45□□□□□ -0.42
KCNMA1-246ENST00000638848 ZNF746Q6NUN9 644 aaPredicted RBP12.45□□□□□ -0.42
KCNMA1-246ENST00000638848 PURBQ96QR8 312 aaKnown RBP12.45□□□□□ -0.42
KCNMA1-246ENST00000638848 SLC40A1Q9NP59 571 aa12.45□□□□□ -0.42
KCNMA1-246ENST00000638848 PCDHA12Q9UN75 941 aa12.45□□□□□ -0.42
KCNMA1-246ENST00000638848 ORC4O43929 436 aa12.45□□□□□ -0.42
KCNMA1-246ENST00000638848 NOL4O94818 638 aa12.45□□□□□ -0.42
KCNMA1-246ENST00000638848 ZKSCAN8Q15776 578 aaPredicted RBP12.45□□□□□ -0.42
KCNMA1-246ENST00000638848 CENPPQ6IPU0 288 aa12.45□□□□□ -0.42
KCNMA1-246ENST00000638848 UNC13DQ70J99 1090 aa12.45□□□□□ -0.42
KCNMA1-246ENST00000638848 ZNF571Q7Z3V5 609 aaPredicted RBP12.45□□□□□ -0.42
KCNMA1-246ENST00000638848 SETDB2Q96T68 719 aa12.45□□□□□ -0.42
KCNMA1-246ENST00000638848 C7orf25Q9BPX7 421 aa12.45□□□□□ -0.42
KCNMA1-246ENST00000638848 ZNF219Q9P2Y4 722 aaPredicted RBP12.45□□□□□ -0.42
KCNMA1-246ENST00000638848 SPDYE3A6NKU9 549 aa12.45□□□□□ -0.42
KCNMA1-246ENST00000638848 GNPATO15228 680 aa12.45□□□□□ -0.42
KCNMA1-246ENST00000638848 CTNND1O60716 968 aaKnown RBP12.45□□□□□ -0.42
KCNMA1-246ENST00000638848 SHBGP04278 402 aa12.45□□□□□ -0.42
KCNMA1-246ENST00000638848 ADCY7P51828 1080 aa12.45□□□□□ -0.42
KCNMA1-246ENST00000638848 TBC1D1Q86TI0 1168 aaPredicted RBP12.45□□□□□ -0.42
KCNMA1-246ENST00000638848 RAD54LQ92698 747 aa12.45□□□□□ -0.42
KCNMA1-246ENST00000638848 BSDC1Q9NW68 430 aaPredicted RBP12.45□□□□□ -0.42
KCNMA1-246ENST00000638848 STK38LQ9Y2H1 464 aa12.45□□□□□ -0.42
KCNMA1-246ENST00000638848 COL4A1P02462 1669 aa12.45□□□□□ -0.42
KCNMA1-246ENST00000638848 MYH6P13533 1939 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms