RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 LMBR1Q8WVP7 490 aa19.38■□□□□ 0.69
SMN2-216ENST00000638794 GPRASP2Q96D09 838 aa19.38■□□□□ 0.69
SMN2-216ENST00000638794 NECAB3Q96P71 396 aaPredicted RBP19.38■□□□□ 0.69
SMN2-216ENST00000638794 TGS1Q96RS0 853 aaKnown RBP19.38■□□□□ 0.69
SMN2-216ENST00000638794 AMHP03971 560 aa19.37■□□□□ 0.69
SMN2-216ENST00000638794 KCNA2P16389 499 aa19.37■□□□□ 0.69
SMN2-216ENST00000638794 ITGB5P18084 799 aa19.37■□□□□ 0.69
SMN2-216ENST00000638794 ERVK-21P61565 698 aa19.37■□□□□ 0.69
SMN2-216ENST00000638794 ADAM17P78536 824 aa19.37■□□□□ 0.69
SMN2-216ENST00000638794 ARHGAP4P98171 946 aa19.37■□□□□ 0.69
SMN2-216ENST00000638794 SGMS1Q86VZ5 419 aa19.37■□□□□ 0.69
SMN2-216ENST00000638794 SKAP1Q86WV1 359 aa19.37■□□□□ 0.69
SMN2-216ENST00000638794 GIMAP8Q8ND71 665 aaPredicted RBP19.37■□□□□ 0.69
SMN2-216ENST00000638794 SUGCTQ9HAC7 445 aa19.37■□□□□ 0.69
SMN2-216ENST00000638794 COG5Q9UP83 839 aa19.37■□□□□ 0.69
SMN2-216ENST00000638794 TCF7P36402 384 aaPredicted RBP19.36■□□□□ 0.69
SMN2-216ENST00000638794 HEATR3Q7Z4Q2 680 aa19.36■□□□□ 0.69
SMN2-216ENST00000638794 SEPT8Q92599 483 aa19.36■□□□□ 0.69
SMN2-216ENST00000638794 CDHR1Q96JP9 859 aa19.36■□□□□ 0.69
SMN2-216ENST00000638794 LMCD1Q9NZU5 365 aa19.36■□□□□ 0.69
SMN2-216ENST00000638794 INSL6Q9Y581 213 aa19.36■□□□□ 0.69
SMN2-216ENST00000638794 NRCAMQ92823 1304 aa19.35■□□□□ 0.69
SMN2-216ENST00000638794 SPDYE3A6NKU9 549 aa19.35■□□□□ 0.69
SMN2-216ENST00000638794 HTRA4P83105 476 aaPredicted RBP19.35■□□□□ 0.69
SMN2-216ENST00000638794 MTMR1Q13613 665 aa19.35■□□□□ 0.69
SMN2-216ENST00000638794 BMP2KLQ5H9B9 411 aa19.35■□□□□ 0.69
SMN2-216ENST00000638794 HLA-CQ95604 372 aa19.35■□□□□ 0.69
SMN2-216ENST00000638794 PKD2L1Q9P0L9 805 aa19.35■□□□□ 0.69
SMN2-216ENST00000638794 PCDHA6Q9UN73 950 aa19.35■□□□□ 0.69
SMN2-216ENST00000638794 PCDHA8Q9Y5H6 950 aa19.35■□□□□ 0.69
SMN2-216ENST00000638794 UBIAD1Q9Y5Z9 338 aa19.35■□□□□ 0.69
SMN2-216ENST00000638794 CNTNAP5Q8WYK1 1306 aa19.34■□□□□ 0.69
SMN2-216ENST00000638794 GSTTP1A0A1W2PQM5 241 aa19.34■□□□□ 0.69
SMN2-216ENST00000638794 SP7Q8TDD2 431 aaPredicted RBP19.34■□□□□ 0.69
SMN2-216ENST00000638794 C17orf80Q9BSJ5 609 aa19.34■□□□□ 0.69
SMN2-216ENST00000638794 NLRC5Q86WI3 1866 aa19.34■□□□□ 0.69
SMN2-216ENST00000638794 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.33■□□□□ 0.68
SMN2-216ENST00000638794 MARK3P27448 753 aa19.33■□□□□ 0.68
SMN2-216ENST00000638794 FAM26DQ5JW98 314 aa19.33■□□□□ 0.68
SMN2-216ENST00000638794 RNF20Q5VTR2 975 aa19.33■□□□□ 0.68
SMN2-216ENST00000638794 WWC2Q6AWC2 1192 aa19.33■□□□□ 0.68
SMN2-216ENST00000638794 APOA5Q6Q788 366 aa19.33■□□□□ 0.68
SMN2-216ENST00000638794 SYNE3Q6ZMZ3 975 aa19.33■□□□□ 0.68
SMN2-216ENST00000638794 RUFY4Q6ZNE9 571 aa19.33■□□□□ 0.68
SMN2-216ENST00000638794 SEPT1Q8WYJ6 367 aa19.33■□□□□ 0.68
SMN2-216ENST00000638794 TOP1MTQ969P6 601 aa19.33■□□□□ 0.68
SMN2-216ENST00000638794 TCEANC2Q96MN5 208 aa19.33■□□□□ 0.68
SMN2-216ENST00000638794 NEK1Q96PY6 1258 aa19.33■□□□□ 0.68
SMN2-216ENST00000638794 JADE2Q9NQC1 790 aa19.33■□□□□ 0.68
SMN2-216ENST00000638794 UPP2O95045 317 aa19.32■□□□□ 0.68
SMN2-216ENST00000638794 CHRNA1P02708 482 aa19.32■□□□□ 0.68
SMN2-216ENST00000638794 PPFIA1Q13136 1202 aa19.32■□□□□ 0.68
SMN2-216ENST00000638794 TYW1BQ6NUM6 668 aa19.32■□□□□ 0.68
SMN2-216ENST00000638794 FBXO22Q8NEZ5 403 aa19.32■□□□□ 0.68
SMN2-216ENST00000638794 APBB2Q92870 758 aa19.32■□□□□ 0.68
SMN2-216ENST00000638794 IFIH1Q9BYX4 1025 aaKnown RBP19.32■□□□□ 0.68
SMN2-216ENST00000638794 RBM28Q9NW13 759 aaKnown RBP19.32■□□□□ 0.68
SMN2-216ENST00000638794 ERAP1Q9NZ08 941 aa19.32■□□□□ 0.68
SMN2-216ENST00000638794 COL4A6Q14031 1691 aa19.32■□□□□ 0.68
SMN2-216ENST00000638794 EXOSC10Q01780 885 aaKnown RBP19.31■□□□□ 0.68
SMN2-216ENST00000638794 GRIK4Q16099 956 aa19.31■□□□□ 0.68
SMN2-216ENST00000638794 TAF2Q6P1X5 1199 aa19.31■□□□□ 0.68
SMN2-216ENST00000638794 GLG1Q92896 1179 aa19.31■□□□□ 0.68
SMN2-216ENST00000638794 YME1L1Q96TA2 773 aa19.31■□□□□ 0.68
SMN2-216ENST00000638794 TUBE1Q9UJT0 475 aa19.31■□□□□ 0.68
SMN2-216ENST00000638794 BRPF3Q9ULD4 1205 aa19.31■□□□□ 0.68
SMN2-216ENST00000638794 RALGAPA2Q2PPJ7 1873 aa19.31■□□□□ 0.68
SMN2-216ENST00000638794 MAFGO15525 162 aa19.3■□□□□ 0.68
SMN2-216ENST00000638794 GHRP10912 638 aa19.3■□□□□ 0.68
SMN2-216ENST00000638794 NAPAP54920 295 aa19.3■□□□□ 0.68
SMN2-216ENST00000638794 FUT2Q10981 343 aa19.3■□□□□ 0.68
SMN2-216ENST00000638794 RTN1Q16799 776 aa19.3■□□□□ 0.68
SMN2-216ENST00000638794 ADCK5Q3MIX3 580 aa19.3■□□□□ 0.68
SMN2-216ENST00000638794 CENPQQ7L2Z9 268 aaPredicted RBP19.3■□□□□ 0.68
SMN2-216ENST00000638794 DHX32Q7L7V1 743 aaKnown RBP19.3■□□□□ 0.68
SMN2-216ENST00000638794 RPAINQ86UA6 219 aa19.3■□□□□ 0.68
SMN2-216ENST00000638794 RASEFQ8IZ41 740 aa19.3■□□□□ 0.68
SMN2-216ENST00000638794 CYP2W1Q8TAV3 490 aa19.3■□□□□ 0.68
SMN2-216ENST00000638794 PGBD1Q96JS3 809 aa19.3■□□□□ 0.68
SMN2-216ENST00000638794 SMARCAD1Q9H4L7 1026 aa19.3■□□□□ 0.68
SMN2-216ENST00000638794 EHMT1Q9H9B1 1298 aa19.3■□□□□ 0.68
SMN2-216ENST00000638794 JPH1Q9HDC5 661 aaPredicted RBP19.3■□□□□ 0.68
SMN2-216ENST00000638794 KCNH7Q9NS40 1196 aa19.3■□□□□ 0.68
SMN2-216ENST00000638794 MBLAC1A4D2B0 266 aaPredicted RBP19.29■□□□□ 0.68
SMN2-216ENST00000638794 ZBTB43O43298 467 aa19.29■□□□□ 0.68
SMN2-216ENST00000638794 MGAT3Q09327 533 aa19.29■□□□□ 0.68
SMN2-216ENST00000638794 EPC2Q52LR7 807 aa19.29■□□□□ 0.68
SMN2-216ENST00000638794 MARCH8Q5T0T0 291 aa19.29■□□□□ 0.68
SMN2-216ENST00000638794 PPP1R18Q6NYC8 613 aa19.29■□□□□ 0.68
SMN2-216ENST00000638794 PCYT2Q99447 389 aa19.29■□□□□ 0.68
SMN2-216ENST00000638794 MXRA8Q9BRK3 442 aa19.29■□□□□ 0.68
SMN2-216ENST00000638794 RIC8AQ9NPQ8 531 aa19.29■□□□□ 0.68
SMN2-216ENST00000638794 LOXHD1Q8IVV2 1947 aa19.28■□□□□ 0.68
SMN2-216ENST00000638794 IGBP1P78318 339 aa19.28■□□□□ 0.68
SMN2-216ENST00000638794 LPIN1Q14693 890 aa19.28■□□□□ 0.68
SMN2-216ENST00000638794 TSGA10IPQ3SY00 556 aa19.28■□□□□ 0.68
SMN2-216ENST00000638794 RSPH3Q86UC2 560 aa19.28■□□□□ 0.68
SMN2-216ENST00000638794 DNAJB3Q8WWF6 145 aa19.28■□□□□ 0.68
SMN2-216ENST00000638794 SAMD11Q96NU1 681 aa19.28■□□□□ 0.68
SMN2-216ENST00000638794 SLC9A2Q9UBY0 812 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms