RNA–Protein interactions for RNA: ENST00000637981.1

CACNA1A-256, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,346 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-256	ENST00000637981	TRAF1	Q13077	416 aa		10.88	□□□□□ -0.67
CACNA1A-256	ENST00000637981	MKRN4P	Q13434	485 aa	Predicted RBP	10.88	□□□□□ -0.67
CACNA1A-256	ENST00000637981	HIC1	Q14526	733 aa		10.88	□□□□□ -0.67
CACNA1A-256	ENST00000637981	GRM4	Q14833	912 aa		10.88	□□□□□ -0.67
CACNA1A-256	ENST00000637981	EPC2	Q52LR7	807 aa		10.88	□□□□□ -0.67
CACNA1A-256	ENST00000637981	TIGD5	Q53EQ6	642 aa		10.88	□□□□□ -0.67
CACNA1A-256	ENST00000637981	EP400NL	Q6ZTU2	488 aa		10.88	□□□□□ -0.67
CACNA1A-256	ENST00000637981	FBXO11	Q86XK2	927 aa		10.88	□□□□□ -0.67
CACNA1A-256	ENST00000637981	FANCB	Q8NB91	859 aa		10.88	□□□□□ -0.67
CACNA1A-256	ENST00000637981	NEK9	Q8TD19	979 aa		10.88	□□□□□ -0.67
CACNA1A-256	ENST00000637981	ZNF274	Q96GC6	653 aa	Predicted RBP	10.88	□□□□□ -0.67
CACNA1A-256	ENST00000637981	PXMP2	Q9NR77	195 aa		10.88	□□□□□ -0.67
CACNA1A-256	ENST00000637981	MRPL11	Q9Y3B7	192 aa	Known RBP	10.88	□□□□□ -0.67
CACNA1A-256	ENST00000637981	GOLGA8B	A8MQT2	603 aa		10.87	□□□□□ -0.67
CACNA1A-256	ENST00000637981	KLRF2	D3W0D1	207 aa		10.87	□□□□□ -0.67
CACNA1A-256	ENST00000637981	DCX	O43602	365 aa		10.87	□□□□□ -0.67
CACNA1A-256	ENST00000637981	SORBS3	O60504	671 aa		10.87	□□□□□ -0.67
CACNA1A-256	ENST00000637981	PPFIA4	O75335	1185 aa		10.87	□□□□□ -0.67
CACNA1A-256	ENST00000637981	CFB	P00751	764 aa		10.87	□□□□□ -0.67
CACNA1A-256	ENST00000637981	HOXD8	P13378	290 aa	Predicted RBP	10.87	□□□□□ -0.67
CACNA1A-256	ENST00000637981	MRE11	P49959	708 aa		10.87	□□□□□ -0.67
CACNA1A-256	ENST00000637981	METAP2	P50579	478 aa	Known RBP eCLIP	10.87	□□□□□ -0.67
CACNA1A-256	ENST00000637981	APOBR	Q0VD83	1088 aa		10.87	□□□□□ -0.67
CACNA1A-256	ENST00000637981	RTN1	Q16799	776 aa		10.87	□□□□□ -0.67
CACNA1A-256	ENST00000637981	QRICH1	Q2TAL8	776 aa		10.87	□□□□□ -0.67
CACNA1A-256	ENST00000637981	HSDL1	Q3SXM5	330 aa		10.87	□□□□□ -0.67
CACNA1A-256	ENST00000637981	PLEKHG4	Q58EX7	1191 aa		10.87	□□□□□ -0.67
CACNA1A-256	ENST00000637981	CPLX2	Q6PUV4	134 aa	Known RBP	10.87	□□□□□ -0.67
CACNA1A-256	ENST00000637981	MICU3	Q86XE3	530 aa		10.87	□□□□□ -0.67
CACNA1A-256	ENST00000637981	BANK1	Q8NDB2	785 aa		10.87	□□□□□ -0.67
CACNA1A-256	ENST00000637981	SPATA33	Q96N06	139 aa		10.87	□□□□□ -0.67
CACNA1A-256	ENST00000637981	SAMD11	Q96NU1	681 aa		10.87	□□□□□ -0.67
CACNA1A-256	ENST00000637981	YME1L1	Q96TA2	773 aa		10.87	□□□□□ -0.67
CACNA1A-256	ENST00000637981	BRWD1	Q9NSI6	2320 aa		10.87	□□□□□ -0.67
CACNA1A-256	ENST00000637981	MICAL3	Q7RTP6	2002 aa		10.87	□□□□□ -0.67
CACNA1A-256	ENST00000637981	BAZ2B	Q9UIF8	2168 aa	Known RBP	10.86	□□□□□ -0.67
CACNA1A-256	ENST00000637981	PALM3	A6NDB9	673 aa	Predicted RBP	10.86	□□□□□ -0.67
CACNA1A-256	ENST00000637981	GOLGA8A	A7E2F4	631 aa		10.86	□□□□□ -0.67
CACNA1A-256	ENST00000637981		H3BNC9	293 aa		10.86	□□□□□ -0.67
CACNA1A-256	ENST00000637981	UPP2	O95045	317 aa		10.86	□□□□□ -0.67
CACNA1A-256	ENST00000637981	MYCL	P12524	364 aa	Predicted RBP	10.86	□□□□□ -0.67
CACNA1A-256	ENST00000637981	AK2	P54819	239 aa		10.86	□□□□□ -0.67
CACNA1A-256	ENST00000637981	GPM6B	Q13491	265 aa		10.86	□□□□□ -0.67
CACNA1A-256	ENST00000637981	TOB2	Q14106	344 aa	Predicted RBP	10.86	□□□□□ -0.67
CACNA1A-256	ENST00000637981	TCEAL5	Q5H9L2	206 aa		10.86	□□□□□ -0.67
CACNA1A-256	ENST00000637981	CELF3	Q5SZQ8	465 aa	Known RBP	10.86	□□□□□ -0.67
CACNA1A-256	ENST00000637981	MYSM1	Q5VVJ2	828 aa		10.86	□□□□□ -0.67
CACNA1A-256	ENST00000637981	SERINC5	Q86VE9	423 aa		10.86	□□□□□ -0.67
CACNA1A-256	ENST00000637981	SEPT8	Q92599	483 aa		10.86	□□□□□ -0.67
CACNA1A-256	ENST00000637981	ATP6V0A1	Q93050	837 aa		10.86	□□□□□ -0.67
CACNA1A-256	ENST00000637981	PABPC5	Q96DU9	382 aa	Known RBP	10.86	□□□□□ -0.67
CACNA1A-256	ENST00000637981	ZSCAN31	Q96LW9	406 aa	Predicted RBP	10.86	□□□□□ -0.67
CACNA1A-256	ENST00000637981	KIF2C	Q99661	725 aa		10.86	□□□□□ -0.67
CACNA1A-256	ENST00000637981	SLK	Q9H2G2	1235 aa	Predicted RBP	10.86	□□□□□ -0.67
CACNA1A-256	ENST00000637981	JMJD4	Q9H9V9	463 aa		10.86	□□□□□ -0.67
CACNA1A-256	ENST00000637981	SENP2	Q9HC62	589 aa		10.86	□□□□□ -0.67
CACNA1A-256	ENST00000637981	VAT1L	Q9HCJ6	419 aa		10.86	□□□□□ -0.67
CACNA1A-256	ENST00000637981	MAD2L2	Q9UI95	211 aa		10.86	□□□□□ -0.67
CACNA1A-256	ENST00000637981	BRPF3	Q9ULD4	1205 aa		10.86	□□□□□ -0.67
CACNA1A-256	ENST00000637981	LIMCH1	Q9UPQ0	1083 aa		10.86	□□□□□ -0.67
CACNA1A-256	ENST00000637981	FAM50B	Q9Y247	325 aa		10.86	□□□□□ -0.67
CACNA1A-256	ENST00000637981	MYH7B	A7E2Y1	1941 aa		10.86	□□□□□ -0.67
CACNA1A-256	ENST00000637981	POTEB3	A0JP26	581 aa		10.85	□□□□□ -0.67
CACNA1A-256	ENST00000637981	C17orf102	A2RUQ5	167 aa		10.85	□□□□□ -0.67
CACNA1A-256	ENST00000637981	CPLX1	O14810	134 aa		10.85	□□□□□ -0.67
CACNA1A-256	ENST00000637981	RGS20	O76081	388 aa		10.85	□□□□□ -0.67
CACNA1A-256	ENST00000637981	GGPS1	O95749	300 aa		10.85	□□□□□ -0.67
CACNA1A-256	ENST00000637981	PDIA3	P30101	505 aa	Known RBP	10.85	□□□□□ -0.67
CACNA1A-256	ENST00000637981	HSD17B4	P51659	736 aa		10.85	□□□□□ -0.67
CACNA1A-256	ENST00000637981	NHLH1	Q02575	133 aa		10.85	□□□□□ -0.67
CACNA1A-256	ENST00000637981	ZP2	Q05996	745 aa		10.85	□□□□□ -0.67
CACNA1A-256	ENST00000637981	COL9A3	Q14050	684 aa	Predicted RBP	10.85	□□□□□ -0.67
CACNA1A-256	ENST00000637981	KCNV1	Q6PIU1	500 aa		10.85	□□□□□ -0.67
CACNA1A-256	ENST00000637981	POTEB	Q6S5H4	581 aa		10.85	□□□□□ -0.67
CACNA1A-256	ENST00000637981	TMEM192	Q8IY95	271 aa		10.85	□□□□□ -0.67
CACNA1A-256	ENST00000637981	TOP1MT	Q969P6	601 aa		10.85	□□□□□ -0.67
CACNA1A-256	ENST00000637981	PDCD2L	Q9BRP1	358 aa		10.85	□□□□□ -0.67
CACNA1A-256	ENST00000637981	C16orf70	Q9BSU1	422 aa		10.85	□□□□□ -0.67
CACNA1A-256	ENST00000637981	MYL10	Q9BUA6	226 aa		10.85	□□□□□ -0.67
CACNA1A-256	ENST00000637981	SPZ1	Q9BXG8	430 aa		10.85	□□□□□ -0.67
CACNA1A-256	ENST00000637981	NSUN3	Q9H649	340 aa	Known RBP	10.85	□□□□□ -0.67
CACNA1A-256	ENST00000637981	SH2B1	Q9NRF2	756 aa	Predicted RBP	10.85	□□□□□ -0.67
CACNA1A-256	ENST00000637981	CLDND1	Q9NY35	253 aa		10.85	□□□□□ -0.67
CACNA1A-256	ENST00000637981	PRKAG3	Q9UGI9	489 aa		10.85	□□□□□ -0.67
CACNA1A-256	ENST00000637981	NID2	Q14112	1375 aa		10.85	□□□□□ -0.67
CACNA1A-256	ENST00000637981		H3BRB1	525 aa		10.84	□□□□□ -0.67
CACNA1A-256	ENST00000637981	OPLAH	O14841	1288 aa		10.84	□□□□□ -0.67
CACNA1A-256	ENST00000637981	TREH	O43280	583 aa		10.84	□□□□□ -0.67
CACNA1A-256	ENST00000637981	CDKL5	O76039	1030 aa		10.84	□□□□□ -0.67
CACNA1A-256	ENST00000637981	CTSH	P09668	335 aa		10.84	□□□□□ -0.67
CACNA1A-256	ENST00000637981	SMIM10L2A	P0DMW4	78 aa		10.84	□□□□□ -0.67
CACNA1A-256	ENST00000637981	SMIM10L2B	P0DMW5	78 aa		10.84	□□□□□ -0.67
CACNA1A-256	ENST00000637981	UBA1	P22314	1058 aa	Known RBP	10.84	□□□□□ -0.67
CACNA1A-256	ENST00000637981	AKAP17A	Q02040	695 aa	Known RBP	10.84	□□□□□ -0.67
CACNA1A-256	ENST00000637981	SP2	Q02086	613 aa		10.84	□□□□□ -0.67
CACNA1A-256	ENST00000637981	COL19A1	Q14993	1142 aa		10.84	□□□□□ -0.67
CACNA1A-256	ENST00000637981	PGM5	Q15124	567 aa		10.84	□□□□□ -0.67
CACNA1A-256	ENST00000637981	SLC35G1	Q2M3R5	365 aa		10.84	□□□□□ -0.67
CACNA1A-256	ENST00000637981	ADHFE1	Q8IWW8	467 aa		10.84	□□□□□ -0.67
CACNA1A-256	ENST00000637981	STAG2	Q8N3U4	1231 aa		10.84	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms