RNA–Protein interactions for RNA: ENST00000637777.1

CACNA1A-249, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 728 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-249ENST00000637777 NONOQ15233 471 aaKnown RBP eCLIP16.36■□□□□ 0.21
CACNA1A-249ENST00000637777 RABEP1Q15276 862 aa16.36■□□□□ 0.21
CACNA1A-249ENST00000637777 PSRC1Q6PGN9 363 aaPredicted RBP16.36■□□□□ 0.21
CACNA1A-249ENST00000637777 NIPA1Q7RTP0 329 aa16.36■□□□□ 0.21
CACNA1A-249ENST00000637777 KRT25Q7Z3Z0 450 aa16.36■□□□□ 0.21
CACNA1A-249ENST00000637777 SESTD1Q86VW0 696 aa16.36■□□□□ 0.21
CACNA1A-249ENST00000637777 RPUSD2Q8IZ73 545 aaKnown RBP16.36■□□□□ 0.21
CACNA1A-249ENST00000637777 FAM177A1Q8N128 213 aaPredicted RBP16.36■□□□□ 0.21
CACNA1A-249ENST00000637777 ATP6V0A1Q93050 837 aa16.36■□□□□ 0.21
CACNA1A-249ENST00000637777 LRCH3Q96II8 777 aa16.36■□□□□ 0.21
CACNA1A-249ENST00000637777 FTOQ9C0B1 505 aaKnown RBP eCLIP16.36■□□□□ 0.21
CACNA1A-249ENST00000637777 MTIF3Q9H2K0 278 aaKnown RBP16.36■□□□□ 0.21
CACNA1A-249ENST00000637777 SMARCAD1Q9H4L7 1026 aa16.36■□□□□ 0.21
CACNA1A-249ENST00000637777 IL23AQ9NPF7 189 aa16.36■□□□□ 0.21
CACNA1A-249ENST00000637777 NFASCO94856 1347 aa16.36■□□□□ 0.21
CACNA1A-249ENST00000637777 IPO5O00410 1097 aaKnown RBP16.35■□□□□ 0.21
CACNA1A-249ENST00000637777 JAK2O60674 1132 aa16.35■□□□□ 0.21
CACNA1A-249ENST00000637777 RBM25P49756 843 aaKnown RBP16.35■□□□□ 0.21
CACNA1A-249ENST00000637777 ACTR2P61160 394 aa16.35■□□□□ 0.21
CACNA1A-249ENST00000637777 ZNF200P98182 395 aaPredicted RBP16.35■□□□□ 0.21
CACNA1A-249ENST00000637777 ITGB3BPQ13352 177 aaPredicted RBP16.35■□□□□ 0.21
CACNA1A-249ENST00000637777 DAGLBQ8NCG7 672 aa16.35■□□□□ 0.21
CACNA1A-249ENST00000637777 NSUN7Q8NE18 718 aaKnown RBP16.35■□□□□ 0.21
CACNA1A-249ENST00000637777 CAGE1Q8TC20 777 aa16.35■□□□□ 0.21
CACNA1A-249ENST00000637777 ZSCAN31Q96LW9 406 aaPredicted RBP16.35■□□□□ 0.21
CACNA1A-249ENST00000637777 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.35■□□□□ 0.21
CACNA1A-249ENST00000637777 WNT8AQ9H1J5 351 aa16.35■□□□□ 0.21
CACNA1A-249ENST00000637777 GJB4Q9NTQ9 266 aa16.35■□□□□ 0.21
CACNA1A-249ENST00000637777 ERAP1Q9NZ08 941 aa16.35■□□□□ 0.21
CACNA1A-249ENST00000637777 TRPC6Q9Y210 931 aa16.35■□□□□ 0.21
CACNA1A-249ENST00000637777 SAMM50Q9Y512 469 aa16.35■□□□□ 0.21
CACNA1A-249ENST00000637777 TANC1Q9C0D5 1861 aa16.35■□□□□ 0.21
CACNA1A-249ENST00000637777 SCN5AQ14524 2016 aa16.35■□□□□ 0.21
CACNA1A-249ENST00000637777 GSTTP1A0A1W2PQM5 241 aa16.34■□□□□ 0.21
CACNA1A-249ENST00000637777 ZBBXA8MT70 800 aa16.34■□□□□ 0.21
CACNA1A-249ENST00000637777 SOX1O00570 391 aaPredicted RBP16.34■□□□□ 0.21
CACNA1A-249ENST00000637777 KRT2P35908 639 aa16.34■□□□□ 0.21
CACNA1A-249ENST00000637777 IGBP1P78318 339 aa16.34■□□□□ 0.21
CACNA1A-249ENST00000637777 PPFIA1Q13136 1202 aa16.34■□□□□ 0.21
CACNA1A-249ENST00000637777 INF2Q27J81 1249 aa16.34■□□□□ 0.21
CACNA1A-249ENST00000637777 LRIT3Q3SXY7 679 aa16.34■□□□□ 0.21
CACNA1A-249ENST00000637777 FAM160B1Q5W0V3 765 aa16.34■□□□□ 0.21
CACNA1A-249ENST00000637777 ZNF365Q70YC5 407 aa16.34■□□□□ 0.21
CACNA1A-249ENST00000637777 FAM184AQ8NB25 1140 aa16.34■□□□□ 0.21
CACNA1A-249ENST00000637777 PHF20Q9BVI0 1012 aa16.34■□□□□ 0.21
CACNA1A-249ENST00000637777 SH2B1Q9NRF2 756 aaPredicted RBP16.34■□□□□ 0.21
CACNA1A-249ENST00000637777 SETD4Q9NVD3 440 aa16.34■□□□□ 0.21
CACNA1A-249ENST00000637777 PITPNM1O00562 1244 aa16.33■□□□□ 0.2
CACNA1A-249ENST00000637777 CHMP2AO43633 222 aa16.33■□□□□ 0.2
CACNA1A-249ENST00000637777 MARCH6O60337 910 aa16.33■□□□□ 0.2
CACNA1A-249ENST00000637777 FGBP02675 491 aa16.33■□□□□ 0.2
CACNA1A-249ENST00000637777 THPOP40225 353 aa16.33■□□□□ 0.2
CACNA1A-249ENST00000637777 USP11P51784 963 aa16.33■□□□□ 0.2
CACNA1A-249ENST00000637777 PTK7Q13308 1070 aa16.33■□□□□ 0.2
CACNA1A-249ENST00000637777 LETM2Q2VYF4 491 aa16.33■□□□□ 0.2
CACNA1A-249ENST00000637777 MIS18BP1Q6P0N0 1132 aa16.33■□□□□ 0.2
CACNA1A-249ENST00000637777 PIK3AP1Q6ZUJ8 805 aa16.33■□□□□ 0.2
CACNA1A-249ENST00000637777 LRRC8DQ7L1W4 858 aa16.33■□□□□ 0.2
CACNA1A-249ENST00000637777 OTOP2Q7RTS6 562 aa16.33■□□□□ 0.2
CACNA1A-249ENST00000637777 CKAP2LQ8IYA6 745 aa16.33■□□□□ 0.2
CACNA1A-249ENST00000637777 AFAP1L1Q8TED9 768 aa16.33■□□□□ 0.2
CACNA1A-249ENST00000637777 RNPEPQ9H4A4 650 aa16.33■□□□□ 0.2
CACNA1A-249ENST00000637777 TBC1D22BQ9NU19 505 aa16.33■□□□□ 0.2
CACNA1A-249ENST00000637777 LAMA3Q16787 3333 aa16.33■□□□□ 0.2
CACNA1A-249ENST00000637777 IGLV3-22A0A075B6J6 115 aa16.32■□□□□ 0.2
CACNA1A-249ENST00000637777 TREHO43280 583 aa16.32■□□□□ 0.2
CACNA1A-249ENST00000637777 GAS7O60861 476 aa16.32■□□□□ 0.2
CACNA1A-249ENST00000637777 ACTN1P12814 892 aa16.32■□□□□ 0.2
CACNA1A-249ENST00000637777 SELPP16109 830 aa16.32■□□□□ 0.2
CACNA1A-249ENST00000637777 RFC2P35250 354 aa16.32■□□□□ 0.2
CACNA1A-249ENST00000637777 GNL2Q13823 731 aaKnown RBP16.32■□□□□ 0.2
CACNA1A-249ENST00000637777 SAFBQ15424 915 aaKnown RBP eCLIP16.32■□□□□ 0.2
CACNA1A-249ENST00000637777 TMEM240Q5SV17 173 aa16.32■□□□□ 0.2
CACNA1A-249ENST00000637777 TRMT1LQ7Z2T5 733 aaKnown RBP16.32■□□□□ 0.2
CACNA1A-249ENST00000637777 EMSYQ7Z589 1322 aa16.32■□□□□ 0.2
CACNA1A-249ENST00000637777 CRYGNQ8WXF5 182 aa16.32■□□□□ 0.2
CACNA1A-249ENST00000637777 TNPO1Q92973 898 aaKnown RBP16.32■□□□□ 0.2
CACNA1A-249ENST00000637777 KIF2CQ99661 725 aa16.32■□□□□ 0.2
CACNA1A-249ENST00000637777 MYH9P35579 1960 aaKnown RBP16.31■□□□□ 0.2
CACNA1A-249ENST00000637777 NRCAMQ92823 1304 aa16.31■□□□□ 0.2
CACNA1A-249ENST00000637777 TDP2O95551 362 aa16.31■□□□□ 0.2
CACNA1A-249ENST00000637777 PFKMP08237 780 aa16.31■□□□□ 0.2
CACNA1A-249ENST00000637777 CTSHP09668 335 aa16.31■□□□□ 0.2
CACNA1A-249ENST00000637777 IQCF3P0C7M6 154 aa16.31■□□□□ 0.2
CACNA1A-249ENST00000637777 CKBP12277 381 aa16.31■□□□□ 0.2
CACNA1A-249ENST00000637777 FDPSP14324 419 aaKnown RBP16.31■□□□□ 0.2
CACNA1A-249ENST00000637777 CIITAP33076 1130 aa16.31■□□□□ 0.2
CACNA1A-249ENST00000637777 STAT5BP51692 787 aa16.31■□□□□ 0.2
CACNA1A-249ENST00000637777 KRT76Q01546 638 aa16.31■□□□□ 0.2
CACNA1A-249ENST00000637777 GUCY1B3Q02153 619 aa16.31■□□□□ 0.2
CACNA1A-249ENST00000637777 GRIK4Q16099 956 aa16.31■□□□□ 0.2
CACNA1A-249ENST00000637777 LRCH2Q5VUJ6 765 aa16.31■□□□□ 0.2
CACNA1A-249ENST00000637777 PDXDC2PQ6P474 469 aa16.31■□□□□ 0.2
CACNA1A-249ENST00000637777 NEK8Q86SG6 692 aa16.31■□□□□ 0.2
CACNA1A-249ENST00000637777 OXER1Q8TDS5 423 aa16.31■□□□□ 0.2
CACNA1A-249ENST00000637777 LMBR1Q8WVP7 490 aa16.31■□□□□ 0.2
CACNA1A-249ENST00000637777 DHX38Q92620 1227 aaKnown RBP16.31■□□□□ 0.2
CACNA1A-249ENST00000637777 TEKT3Q9BXF9 490 aa16.31■□□□□ 0.2
CACNA1A-249ENST00000637777 ZNF302Q9NR11 478 aa16.31■□□□□ 0.2
CACNA1A-249ENST00000637777 DDX25Q9UHL0 483 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms