RNA–Protein interactions for RNA: ENST00000637594.1

CLN8-214, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 406 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-214ENST00000637594 KIF5BP33176 963 aa10.15□□□□□ -0.78
CLN8-214ENST00000637594 ANTXR2P58335 489 aa10.15□□□□□ -0.78
CLN8-214ENST00000637594 GPM6BQ13491 265 aa10.15□□□□□ -0.78
CLN8-214ENST00000637594 TIGD5Q53EQ6 642 aa10.15□□□□□ -0.78
CLN8-214ENST00000637594 PTCRAQ6ISU1 281 aaPredicted RBP10.15□□□□□ -0.78
CLN8-214ENST00000637594 TAF2Q6P1X5 1199 aa10.15□□□□□ -0.78
CLN8-214ENST00000637594 POTEBQ6S5H4 581 aa10.15□□□□□ -0.78
CLN8-214ENST00000637594 RALYLQ86SE5 291 aaKnown RBP10.15□□□□□ -0.78
CLN8-214ENST00000637594 TEX2Q8IWB9 1127 aa10.15□□□□□ -0.78
CLN8-214ENST00000637594 MB21D2Q8IYB1 491 aaPredicted RBP10.15□□□□□ -0.78
CLN8-214ENST00000637594 CRIPAKQ8N1N5 446 aa10.15□□□□□ -0.78
CLN8-214ENST00000637594 BANK1Q8NDB2 785 aa10.15□□□□□ -0.78
CLN8-214ENST00000637594 LMBR1Q8WVP7 490 aa10.15□□□□□ -0.78
CLN8-214ENST00000637594 CLP1Q92989 425 aaKnown RBP10.15□□□□□ -0.78
CLN8-214ENST00000637594 GPRASP2Q96D09 838 aa10.15□□□□□ -0.78
CLN8-214ENST00000637594 PABPC5Q96DU9 382 aaKnown RBP10.15□□□□□ -0.78
CLN8-214ENST00000637594 RRP36Q96EU6 259 aaKnown RBP10.15□□□□□ -0.78
CLN8-214ENST00000637594 IL17RAQ96F46 866 aa10.15□□□□□ -0.78
CLN8-214ENST00000637594 CDHR1Q96JP9 859 aa10.15□□□□□ -0.78
CLN8-214ENST00000637594 IFIH1Q9BYX4 1025 aaKnown RBP10.15□□□□□ -0.78
CLN8-214ENST00000637594 PRKAG3Q9UGI9 489 aa10.15□□□□□ -0.78
CLN8-214ENST00000637594 RWDD3Q9Y3V2 267 aa10.15□□□□□ -0.78
CLN8-214ENST00000637594 SQORQ9Y6N5 450 aa10.15□□□□□ -0.78
CLN8-214ENST00000637594 GSTTP1A0A1W2PQM5 241 aa10.14□□□□□ -0.79
CLN8-214ENST00000637594 C19orf67A6NJJ6 358 aa10.14□□□□□ -0.79
CLN8-214ENST00000637594 PRR33A8MZF0 331 aa10.14□□□□□ -0.79
CLN8-214ENST00000637594 DDAH1O94760 285 aa10.14□□□□□ -0.79
CLN8-214ENST00000637594 RPLP2P05387 115 aaKnown RBP10.14□□□□□ -0.79
CLN8-214ENST00000637594 ALADP13716 330 aa10.14□□□□□ -0.79
CLN8-214ENST00000637594 KCNA2P16389 499 aa10.14□□□□□ -0.79
CLN8-214ENST00000637594 BMPR1AP36894 532 aa10.14□□□□□ -0.79
CLN8-214ENST00000637594 GNAQP50148 359 aa10.14□□□□□ -0.79
CLN8-214ENST00000637594 MGAT3Q09327 533 aa10.14□□□□□ -0.79
CLN8-214ENST00000637594 CTC1Q2NKJ3 1217 aa10.14□□□□□ -0.79
CLN8-214ENST00000637594 MARCH8Q5T0T0 291 aa10.14□□□□□ -0.79
CLN8-214ENST00000637594 USP17L6PQ6QN14 398 aa10.14□□□□□ -0.79
CLN8-214ENST00000637594 SMARCC2Q8TAQ2 1214 aa10.14□□□□□ -0.79
CLN8-214ENST00000637594 SEPT1Q8WYJ6 367 aa10.14□□□□□ -0.79
CLN8-214ENST00000637594 CUL5Q93034 780 aa10.14□□□□□ -0.79
CLN8-214ENST00000637594 ZNF689Q96CS4 500 aaPredicted RBP10.14□□□□□ -0.79
CLN8-214ENST00000637594 LMAN2LQ9H0V9 348 aa10.14□□□□□ -0.79
CLN8-214ENST00000637594 NSUN3Q9H649 340 aaKnown RBP10.14□□□□□ -0.79
CLN8-214ENST00000637594 RC3H2Q9HBD1 1191 aaKnown RBP10.14□□□□□ -0.79
CLN8-214ENST00000637594 LY9Q9HBG7 655 aa10.14□□□□□ -0.79
CLN8-214ENST00000637594 TELO2Q9Y4R8 837 aa10.14□□□□□ -0.79
CLN8-214ENST00000637594 TAF6LQ9Y6J9 622 aa10.14□□□□□ -0.79
CLN8-214ENST00000637594 SIP14410 1827 aa10.14□□□□□ -0.79
CLN8-214ENST00000637594 MYH6P13533 1939 aa10.13□□□□□ -0.79
CLN8-214ENST00000637594 RRN3P2A6NIE6 340 aa10.13□□□□□ -0.79
CLN8-214ENST00000637594 ATP9AO75110 1047 aa10.13□□□□□ -0.79
CLN8-214ENST00000637594 UPP2O95045 317 aa10.13□□□□□ -0.79
CLN8-214ENST00000637594 ITGB5P18084 799 aa10.13□□□□□ -0.79
CLN8-214ENST00000637594 LTBRP36941 435 aa10.13□□□□□ -0.79
CLN8-214ENST00000637594 LIFRP42702 1097 aa10.13□□□□□ -0.79
CLN8-214ENST00000637594 ARHGAP4P98171 946 aa10.13□□□□□ -0.79
CLN8-214ENST00000637594 TCEAL5Q5H9L2 206 aa10.13□□□□□ -0.79
CLN8-214ENST00000637594 RSPH3Q86UC2 560 aa10.13□□□□□ -0.79
CLN8-214ENST00000637594 ZNF654Q8IZM8 581 aa10.13□□□□□ -0.79
CLN8-214ENST00000637594 FIBCD1Q8N539 461 aa10.13□□□□□ -0.79
CLN8-214ENST00000637594 SRBD1Q8N5C6 995 aaKnown RBP10.13□□□□□ -0.79
CLN8-214ENST00000637594 CTCFLQ8NI51 663 aaPredicted RBP10.13□□□□□ -0.79
CLN8-214ENST00000637594 PLVAPQ9BX97 442 aa10.13□□□□□ -0.79
CLN8-214ENST00000637594 SMARCAD1Q9H4L7 1026 aa10.13□□□□□ -0.79
CLN8-214ENST00000637594 PSTPIP2Q9H939 334 aa10.13□□□□□ -0.79
CLN8-214ENST00000637594 ERAP1Q9NZ08 941 aa10.13□□□□□ -0.79
CLN8-214ENST00000637594 FAM50BQ9Y247 325 aa10.13□□□□□ -0.79
CLN8-214ENST00000637594 UBIAD1Q9Y5Z9 338 aa10.13□□□□□ -0.79
CLN8-214ENST00000637594 COL4A4P53420 1690 aaPredicted RBP10.12□□□□□ -0.79
CLN8-214ENST00000637594 RBAK-RBAKDNI3L0D1 243 aa10.12□□□□□ -0.79
CLN8-214ENST00000637594 DGKIO75912 1065 aa10.12□□□□□ -0.79
CLN8-214ENST00000637594 CTSHP09668 335 aa10.12□□□□□ -0.79
CLN8-214ENST00000637594 CALM1P0DP23 149 aa10.12□□□□□ -0.79
CLN8-214ENST00000637594 CALM2P0DP24 149 aa10.12□□□□□ -0.79
CLN8-214ENST00000637594 CALM3P0DP25 149 aa10.12□□□□□ -0.79
CLN8-214ENST00000637594 IL9P15248 144 aa10.12□□□□□ -0.79
CLN8-214ENST00000637594 TCF7P36402 384 aaPredicted RBP10.12□□□□□ -0.79
CLN8-214ENST00000637594 LPIN1Q14693 890 aa10.12□□□□□ -0.79
CLN8-214ENST00000637594 NAALADL2Q58DX5 795 aa10.12□□□□□ -0.79
CLN8-214ENST00000637594 FBXO47Q5MNV8 452 aa10.12□□□□□ -0.79
CLN8-214ENST00000637594 UTP14CQ5TAP6 766 aaKnown RBP10.12□□□□□ -0.79
CLN8-214ENST00000637594 RUFY4Q6ZNE9 571 aa10.12□□□□□ -0.79
CLN8-214ENST00000637594 TRIM50Q86XT4 487 aa10.12□□□□□ -0.79
CLN8-214ENST00000637594 TNPO1Q92973 898 aaKnown RBP10.12□□□□□ -0.79
CLN8-214ENST00000637594 TMEM87BQ96K49 555 aa10.12□□□□□ -0.79
CLN8-214ENST00000637594 C11orf84Q9BUA3 381 aaPredicted RBP10.12□□□□□ -0.79
CLN8-214ENST00000637594 KCNH6Q9H252 994 aa10.12□□□□□ -0.79
CLN8-214ENST00000637594 JADE2Q9NQC1 790 aa10.12□□□□□ -0.79
CLN8-214ENST00000637594 SEC63Q9UGP8 760 aaKnown RBP10.12□□□□□ -0.79
CLN8-214ENST00000637594 MICAL3Q7RTP6 2002 aa10.12□□□□□ -0.79
CLN8-214ENST00000637594 MCM5P33992 734 aa10.11□□□□□ -0.79
CLN8-214ENST00000637594 PPFIA1Q13136 1202 aa10.11□□□□□ -0.79
CLN8-214ENST00000637594 GRIK4Q16099 956 aa10.11□□□□□ -0.79
CLN8-214ENST00000637594 IER5Q5VY09 327 aa10.11□□□□□ -0.79
CLN8-214ENST00000637594 TSHZ1Q6ZSZ6 1077 aa10.11□□□□□ -0.79
CLN8-214ENST00000637594 PLPPR4Q7Z2D5 763 aa10.11□□□□□ -0.79
CLN8-214ENST00000637594 RTN4RL1Q86UN2 441 aaPredicted RBP10.11□□□□□ -0.79
CLN8-214ENST00000637594 ADHFE1Q8IWW8 467 aa10.11□□□□□ -0.79
CLN8-214ENST00000637594 NME8Q8N427 588 aa10.11□□□□□ -0.79
CLN8-214ENST00000637594 P2RX5Q93086 422 aa10.11□□□□□ -0.79
CLN8-214ENST00000637594 FTHL17Q9BXU8 183 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms