RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 CYP2W1Q8TAV3 490 aa15.74■□□□□ 0.11
PNKP-228ENST00000637325 GLG1Q92896 1179 aa15.74■□□□□ 0.11
PNKP-228ENST00000637325 TIFAQ96CG3 184 aa15.74■□□□□ 0.11
PNKP-228ENST00000637325 RNPEPQ9H4A4 650 aa15.74■□□□□ 0.11
PNKP-228ENST00000637325 JPH1Q9HDC5 661 aaPredicted RBP15.74■□□□□ 0.11
PNKP-228ENST00000637325 STXBP5LQ9Y2K9 1186 aa15.74■□□□□ 0.11
PNKP-228ENST00000637325 TELO2Q9Y4R8 837 aa15.74■□□□□ 0.11
PNKP-228ENST00000637325 LOXHD1Q8IVV2 1947 aa15.73■□□□□ 0.11
PNKP-228ENST00000637325 GSTTP1A0A1W2PQM5 241 aa15.73■□□□□ 0.11
PNKP-228ENST00000637325 ARP10275 920 aa15.73■□□□□ 0.11
PNKP-228ENST00000637325 THPOP40225 353 aa15.73■□□□□ 0.11
PNKP-228ENST00000637325 NLRP5P59047 1200 aa15.73■□□□□ 0.11
PNKP-228ENST00000637325 HIC1Q14526 733 aa15.73■□□□□ 0.11
PNKP-228ENST00000637325 RAB30Q15771 203 aa15.73■□□□□ 0.11
PNKP-228ENST00000637325 GUCD1Q96NT3 240 aa15.73■□□□□ 0.11
PNKP-228ENST00000637325 PBX4Q9BYU1 374 aa15.73■□□□□ 0.11
PNKP-228ENST00000637325 TTYH1Q9H313 450 aaPredicted RBP15.73■□□□□ 0.11
PNKP-228ENST00000637325 SMARCAD1Q9H4L7 1026 aa15.73■□□□□ 0.11
PNKP-228ENST00000637325 SETD4Q9NVD3 440 aa15.73■□□□□ 0.11
PNKP-228ENST00000637325 VPS54Q9P1Q0 977 aa15.73■□□□□ 0.11
PNKP-228ENST00000637325 SLC9A2Q9UBY0 812 aa15.73■□□□□ 0.11
PNKP-228ENST00000637325 NFASCO94856 1347 aa15.72■□□□□ 0.11
PNKP-228ENST00000637325 MEIS1O00470 390 aa15.72■□□□□ 0.11
PNKP-228ENST00000637325 TREHO43280 583 aa15.72■□□□□ 0.11
PNKP-228ENST00000637325 DEXIO95424 95 aa15.72■□□□□ 0.11
PNKP-228ENST00000637325 PBX2P40425 430 aa15.72■□□□□ 0.11
PNKP-228ENST00000637325 RBL2Q08999 1139 aa15.72■□□□□ 0.11
PNKP-228ENST00000637325 ANKRD1Q15327 319 aa15.72■□□□□ 0.11
PNKP-228ENST00000637325 ZNF618Q5T7W0 954 aa15.72■□□□□ 0.11
PNKP-228ENST00000637325 SERINC5Q86VE9 423 aa15.72■□□□□ 0.11
PNKP-228ENST00000637325 PLA2G4DQ86XP0 818 aa15.72■□□□□ 0.11
PNKP-228ENST00000637325 VWCEQ96DN2 955 aa15.72■□□□□ 0.11
PNKP-228ENST00000637325 CDX2Q99626 313 aaPredicted RBP15.72■□□□□ 0.11
PNKP-228ENST00000637325 SLKQ9H2G2 1235 aaPredicted RBP15.72■□□□□ 0.11
PNKP-228ENST00000637325 AZI2Q9H6S1 392 aa15.72■□□□□ 0.11
PNKP-228ENST00000637325 AGO4Q9HCK5 861 aaKnown RBP15.72■□□□□ 0.11
PNKP-228ENST00000637325 SH3GLB2Q9NR46 395 aa15.72■□□□□ 0.11
PNKP-228ENST00000637325 ERAP1Q9NZ08 941 aa15.72■□□□□ 0.11
PNKP-228ENST00000637325 MICAL3Q7RTP6 2002 aa15.72■□□□□ 0.11
PNKP-228ENST00000637325 CDKL5O76039 1030 aa15.71■□□□□ 0.11
PNKP-228ENST00000637325 CYP3A4P08684 503 aa15.71■□□□□ 0.11
PNKP-228ENST00000637325 ATP2A2P16615 1042 aaKnown RBP15.71■□□□□ 0.11
PNKP-228ENST00000637325 MARK3P27448 753 aa15.71■□□□□ 0.11
PNKP-228ENST00000637325 KCNJ6P48051 423 aa15.71■□□□□ 0.11
PNKP-228ENST00000637325 TRIM71Q2Q1W2 868 aaKnown RBP15.71■□□□□ 0.11
PNKP-228ENST00000637325 NIPA1Q7RTP0 329 aa15.71■□□□□ 0.11
PNKP-228ENST00000637325 RASGRP4Q8TDF6 673 aa15.71■□□□□ 0.11
PNKP-228ENST00000637325 WNT8BQ93098 351 aa15.71■□□□□ 0.11
PNKP-228ENST00000637325 ZNF576Q9H609 170 aa15.71■□□□□ 0.11
PNKP-228ENST00000637325 NRCAMQ92823 1304 aa15.7■□□□□ 0.1
PNKP-228ENST00000637325 PTPRSQ13332 1948 aa15.7■□□□□ 0.1
PNKP-228ENST00000637325 COL6A3P12111 3177 aa15.7■□□□□ 0.1
PNKP-228ENST00000637325 RSPH10B2B2RC85 870 aa15.7■□□□□ 0.1
PNKP-228ENST00000637325 DDX39AO00148 427 aaKnown RBP15.7■□□□□ 0.1
PNKP-228ENST00000637325 ADAMTS3O15072 1205 aa15.7■□□□□ 0.1
PNKP-228ENST00000637325 BAIAP3O94812 1187 aa15.7■□□□□ 0.1
PNKP-228ENST00000637325 RSPH10BP0C881 870 aa15.7■□□□□ 0.1
PNKP-228ENST00000637325 HOXC8P31273 242 aa15.7■□□□□ 0.1
PNKP-228ENST00000637325 RABGGTBP53611 331 aa15.7■□□□□ 0.1
PNKP-228ENST00000637325 ACTR2P61160 394 aa15.7■□□□□ 0.1
PNKP-228ENST00000637325 PPFIA1Q13136 1202 aa15.7■□□□□ 0.1
PNKP-228ENST00000637325 CNKSR3Q6P9H4 555 aa15.7■□□□□ 0.1
PNKP-228ENST00000637325 TNPO1Q92973 898 aaKnown RBP15.7■□□□□ 0.1
PNKP-228ENST00000637325 SLC9A7Q96T83 725 aa15.7■□□□□ 0.1
PNKP-228ENST00000637325 NKX2-4Q9H2Z4 354 aa15.7■□□□□ 0.1
PNKP-228ENST00000637325 EMSYQ7Z589 1322 aa15.69■□□□□ 0.1
PNKP-228ENST00000637325 FAM86B1E9PN63 330 aa15.69■□□□□ 0.1
PNKP-228ENST00000637325 NBNO60934 754 aa15.69■□□□□ 0.1
PNKP-228ENST00000637325 FAM86B2P0C5J1 330 aa15.69■□□□□ 0.1
PNKP-228ENST00000637325 SETQ01105 290 aaPredicted RBP15.69■□□□□ 0.1
PNKP-228ENST00000637325 SCRN1Q12765 414 aa15.69■□□□□ 0.1
PNKP-228ENST00000637325 ITGB3BPQ13352 177 aaPredicted RBP15.69■□□□□ 0.1
PNKP-228ENST00000637325 PHOSPHO2Q8TCD6 241 aa15.69■□□□□ 0.1
PNKP-228ENST00000637325 LMBR1Q8WVP7 490 aa15.69■□□□□ 0.1
PNKP-228ENST00000637325 MYLIPQ8WY64 445 aa15.69■□□□□ 0.1
PNKP-228ENST00000637325 UIMC1Q96RL1 719 aa15.69■□□□□ 0.1
PNKP-228ENST00000637325 ZNF577Q9BSK1 485 aa15.69■□□□□ 0.1
PNKP-228ENST00000637325 SLC28A3Q9HAS3 691 aa15.69■□□□□ 0.1
PNKP-228ENST00000637325 TCEAL9Q9UHQ7 104 aa15.69■□□□□ 0.1
PNKP-228ENST00000637325 TPCN1Q9ULQ1 816 aa15.69■□□□□ 0.1
PNKP-228ENST00000637325 KIF28PB7ZC32 967 aa15.68■□□□□ 0.1
PNKP-228ENST00000637325 BACH1O14867 736 aa15.68■□□□□ 0.1
PNKP-228ENST00000637325 PFKFB2O60825 505 aa15.68■□□□□ 0.1
PNKP-228ENST00000637325 CAND2O75155 1236 aa15.68■□□□□ 0.1
PNKP-228ENST00000637325 LGR5O75473 907 aa15.68■□□□□ 0.1
PNKP-228ENST00000637325 CXCL10P02778 98 aa15.68■□□□□ 0.1
PNKP-228ENST00000637325 FOSL2P15408 326 aa15.68■□□□□ 0.1
PNKP-228ENST00000637325 STAT5BP51692 787 aa15.68■□□□□ 0.1
PNKP-228ENST00000637325 AK2P54819 239 aa15.68■□□□□ 0.1
PNKP-228ENST00000637325 IGBP1P78318 339 aa15.68■□□□□ 0.1
PNKP-228ENST00000637325 IKBKEQ14164 716 aa15.68■□□□□ 0.1
PNKP-228ENST00000637325 GPNMBQ14956 572 aa15.68■□□□□ 0.1
PNKP-228ENST00000637325 GRIK4Q16099 956 aa15.68■□□□□ 0.1
PNKP-228ENST00000637325 PRR16Q569H4 304 aa15.68■□□□□ 0.1
PNKP-228ENST00000637325 C22orf23Q9BZE7 217 aa15.68■□□□□ 0.1
PNKP-228ENST00000637325 PCDHA4Q9UN74 947 aa15.68■□□□□ 0.1
PNKP-228ENST00000637325 TRPC6Q9Y210 931 aa15.68■□□□□ 0.1
PNKP-228ENST00000637325 PCDHA11Q9Y5I1 949 aa15.68■□□□□ 0.1
PNKP-228ENST00000637325 IGLV3-22A0A075B6J6 115 aa15.67■□□□□ 0.1
PNKP-228ENST00000637325 ABHD14A-ACY1A0A1B0GW23 586 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms