RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 B4GALT4O60513 344 aa21.13■□□□□ 0.97
PNKP-224ENST00000631020 BRD1O95696 1058 aa21.13■□□□□ 0.97
PNKP-224ENST00000631020 ARP10275 920 aa21.13■□□□□ 0.97
PNKP-224ENST00000631020 ICAM3P32942 547 aa21.13■□□□□ 0.97
PNKP-224ENST00000631020 SP2Q02086 613 aa21.13■□□□□ 0.97
PNKP-224ENST00000631020 PTPN11Q06124 597 aaPredicted RBP21.13■□□□□ 0.97
PNKP-224ENST00000631020 ARHGAP1Q07960 439 aa21.13■□□□□ 0.97
PNKP-224ENST00000631020 NBR1Q14596 966 aa21.13■□□□□ 0.97
PNKP-224ENST00000631020 PRR16Q569H4 304 aa21.13■□□□□ 0.97
PNKP-224ENST00000631020 MOXD1Q6UVY6 613 aa21.13■□□□□ 0.97
PNKP-224ENST00000631020 NIPA1Q7RTP0 329 aa21.13■□□□□ 0.97
PNKP-224ENST00000631020 BRAPQ7Z569 592 aa21.13■□□□□ 0.97
PNKP-224ENST00000631020 KCNH7Q9NS40 1196 aa21.13■□□□□ 0.97
PNKP-224ENST00000631020 DDX41Q9UJV9 622 aaKnown RBP21.13■□□□□ 0.97
PNKP-224ENST00000631020 CCNT1O60563 726 aaKnown RBP21.12■□□□□ 0.97
PNKP-224ENST00000631020 MTMR1Q13613 665 aa21.12■□□□□ 0.97
PNKP-224ENST00000631020 GNPTABQ3T906 1256 aa21.12■□□□□ 0.97
PNKP-224ENST00000631020 PPP4R3AQ6IN85 833 aa21.12■□□□□ 0.97
PNKP-224ENST00000631020 PSRC1Q6PGN9 363 aaPredicted RBP21.12■□□□□ 0.97
PNKP-224ENST00000631020 Q7L0L9 218 aa21.12■□□□□ 0.97
PNKP-224ENST00000631020 NLRX1Q86UT6 975 aa21.12■□□□□ 0.97
PNKP-224ENST00000631020 PLA2G4DQ86XP0 818 aa21.12■□□□□ 0.97
PNKP-224ENST00000631020 GPRASP2Q96D09 838 aa21.12■□□□□ 0.97
PNKP-224ENST00000631020 UIMC1Q96RL1 719 aa21.12■□□□□ 0.97
PNKP-224ENST00000631020 NOC4LQ9BVI4 516 aaKnown RBP21.12■□□□□ 0.97
PNKP-224ENST00000631020 BCAS3Q9H6U6 928 aa21.12■□□□□ 0.97
PNKP-224ENST00000631020 COL6A3P12111 3177 aa21.12■□□□□ 0.97
PNKP-224ENST00000631020 FIBPO43427 364 aa21.11■□□□□ 0.97
PNKP-224ENST00000631020 SLC37A4O43826 429 aa21.11■□□□□ 0.97
PNKP-224ENST00000631020 ATP9AO75110 1047 aa21.11■□□□□ 0.97
PNKP-224ENST00000631020 F13A1P00488 732 aa21.11■□□□□ 0.97
PNKP-224ENST00000631020 TRAPPC10P48553 1259 aa21.11■□□□□ 0.97
PNKP-224ENST00000631020 LY6KQ17RY6 165 aa21.11■□□□□ 0.97
PNKP-224ENST00000631020 Q4G0T1 1027 aa21.11■□□□□ 0.97
PNKP-224ENST00000631020 MYSM1Q5VVJ2 828 aa21.11■□□□□ 0.97
PNKP-224ENST00000631020 PPP1R12CQ9BZL4 782 aa21.11■□□□□ 0.97
PNKP-224ENST00000631020 TRPV6Q9H1D0 765 aa21.11■□□□□ 0.97
PNKP-224ENST00000631020 ZSCAN16Q9H4T2 348 aaPredicted RBP21.11■□□□□ 0.97
PNKP-224ENST00000631020 MRVI1Q9Y6F6 885 aa21.11■□□□□ 0.97
PNKP-224ENST00000631020 MMP3P08254 477 aa21.1■□□□□ 0.97
PNKP-224ENST00000631020 TGFB3P10600 412 aa21.1■□□□□ 0.97
PNKP-224ENST00000631020 CSF2RAP15509 400 aa21.1■□□□□ 0.97
PNKP-224ENST00000631020 ZNF174Q15697 407 aa21.1■□□□□ 0.97
PNKP-224ENST00000631020 TTC38Q5R3I4 469 aa21.1■□□□□ 0.97
PNKP-224ENST00000631020 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.1■□□□□ 0.973e-9■■■□□ 18.5
PNKP-224ENST00000631020 DDX25Q9UHL0 483 aaKnown RBP21.1■□□□□ 0.97
PNKP-224ENST00000631020 STXBP5LQ9Y2K9 1186 aa21.1■□□□□ 0.97
PNKP-224ENST00000631020 PCDHB6Q9Y5E3 794 aa21.1■□□□□ 0.97
PNKP-224ENST00000631020 TMEM265A0A087WTH1 108 aa21.09■□□□□ 0.97
PNKP-224ENST00000631020 MAFGO15525 162 aa21.09■□□□□ 0.97
PNKP-224ENST00000631020 GCFC2P16383 781 aaKnown RBP21.09■□□□□ 0.97
PNKP-224ENST00000631020 CYP2C18P33260 490 aa21.09■□□□□ 0.97
PNKP-224ENST00000631020 LAMC2Q13753 1193 aa21.09■□□□□ 0.97
PNKP-224ENST00000631020 NBPF20Q3BBV1 942 aa21.09■□□□□ 0.97
PNKP-224ENST00000631020 RILPL1Q5EBL4 403 aa21.09■□□□□ 0.97
PNKP-224ENST00000631020 TMEM240Q5SV17 173 aa21.09■□□□□ 0.97
PNKP-224ENST00000631020 ZNF697Q5TEC3 545 aa21.09■□□□□ 0.97
PNKP-224ENST00000631020 RASIP1Q5U651 963 aa21.09■□□□□ 0.97
PNKP-224ENST00000631020 C16orf59Q7L2K0 433 aa21.09■□□□□ 0.97
PNKP-224ENST00000631020 AFG1LQ8WV93 481 aa21.09■□□□□ 0.97
PNKP-224ENST00000631020 AGO4Q9HCK5 861 aaKnown RBP21.09■□□□□ 0.97
PNKP-224ENST00000631020 IL23AQ9NPF7 189 aa21.09■□□□□ 0.97
PNKP-224ENST00000631020 NOL7Q9UMY1 257 aaKnown RBP21.09■□□□□ 0.97
PNKP-224ENST00000631020 MSH4O15457 936 aa21.09■□□□□ 0.97
PNKP-224ENST00000631020 MCM7P33993 719 aa21.09■□□□□ 0.97
PNKP-224ENST00000631020 DGKDQ16760 1214 aa21.09■□□□□ 0.97
PNKP-224ENST00000631020 SESTD1Q86VW0 696 aa21.09■□□□□ 0.97
PNKP-224ENST00000631020 PPTC7Q8NI37 304 aa21.09■□□□□ 0.97
PNKP-224ENST00000631020 GJA10Q969M2 543 aa21.09■□□□□ 0.97
PNKP-224ENST00000631020 NAP1L4Q99733 375 aaKnown RBP21.09■□□□□ 0.97
PNKP-224ENST00000631020 PKD2L1Q9P0L9 805 aa21.09■□□□□ 0.97
PNKP-224ENST00000631020 HSFX4A0A1B0GTS1 333 aaPredicted RBP21.08■□□□□ 0.96
PNKP-224ENST00000631020 HSFX3A0A1B0GWH4 333 aaPredicted RBP21.08■□□□□ 0.96
PNKP-224ENST00000631020 HOXD8P13378 290 aaPredicted RBP21.08■□□□□ 0.96
PNKP-224ENST00000631020 KCNA2P16389 499 aa21.08■□□□□ 0.96
PNKP-224ENST00000631020 UBA1P22314 1058 aaKnown RBP21.08■□□□□ 0.96
PNKP-224ENST00000631020 POTEDQ86YR6 584 aa21.08■□□□□ 0.96
PNKP-224ENST00000631020 CDHR1Q96JP9 859 aa21.08■□□□□ 0.96
PNKP-224ENST00000631020 TMEM60Q9H2L4 133 aa21.08■□□□□ 0.96
PNKP-224ENST00000631020 TRMT13Q9NUP7 481 aaKnown RBP21.08■□□□□ 0.96
PNKP-224ENST00000631020 DHX15O43143 795 aaKnown RBP21.07■□□□□ 0.96
PNKP-224ENST00000631020 SETQ01105 290 aaPredicted RBP21.07■□□□□ 0.96
PNKP-224ENST00000631020 ITGB3BPQ13352 177 aaPredicted RBP21.07■□□□□ 0.96
PNKP-224ENST00000631020 DHX37Q8IY37 1157 aaKnown RBP21.07■□□□□ 0.96
PNKP-224ENST00000631020 C4orf32Q8N8J7 132 aa21.07■□□□□ 0.96
PNKP-224ENST00000631020 ETNPPLQ8TBG4 499 aa21.07■□□□□ 0.96
PNKP-224ENST00000631020 HAS1Q92839 578 aa21.07■□□□□ 0.96
PNKP-224ENST00000631020 SENP7Q9BQF6 1050 aa21.07■□□□□ 0.96
PNKP-224ENST00000631020 WNT8AQ9H1J5 351 aa21.07■□□□□ 0.96
PNKP-224ENST00000631020 KCNMB3Q9NPA1 279 aa21.07■□□□□ 0.96
PNKP-224ENST00000631020 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.07■□□□□ 0.96
PNKP-224ENST00000631020 UMODL1Q5DID0 1318 aa21.06■□□□□ 0.96
PNKP-224ENST00000631020 IPO5O00410 1097 aaKnown RBP21.06■□□□□ 0.96
PNKP-224ENST00000631020 PITPNM1O00562 1244 aa21.06■□□□□ 0.96
PNKP-224ENST00000631020 SORBS3O60504 671 aa21.06■□□□□ 0.96
PNKP-224ENST00000631020 NUCB2P80303 420 aa21.06■□□□□ 0.96
PNKP-224ENST00000631020 FAM47CQ5HY64 1035 aa21.06■□□□□ 0.96
PNKP-224ENST00000631020 RPUSD2Q8IZ73 545 aaKnown RBP21.06■□□□□ 0.96
PNKP-224ENST00000631020 HERVK_113Q902F9 699 aa21.06■□□□□ 0.96
PNKP-224ENST00000631020 ZNF577Q9BSK1 485 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms