RNA–Protein interactions for RNA: ENST00000629136.1

CHD2-217, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-217ENST00000629136 CCT2P78371 535 aaKnown RBP12.32□□□□□ -0.44
CHD2-217ENST00000629136 ADAM17P78536 824 aa12.32□□□□□ -0.44
CHD2-217ENST00000629136 MBTPS1Q14703 1052 aa12.32□□□□□ -0.44
CHD2-217ENST00000629136 TCTN1Q2MV58 587 aa12.32□□□□□ -0.44
CHD2-217ENST00000629136 ZNF618Q5T7W0 954 aa12.32□□□□□ -0.44
CHD2-217ENST00000629136 UTP14CQ5TAP6 766 aaKnown RBP12.32□□□□□ -0.44
CHD2-217ENST00000629136 SERINC5Q86VE9 423 aa12.32□□□□□ -0.44
CHD2-217ENST00000629136 KCNH7Q9NS40 1196 aa12.32□□□□□ -0.44
CHD2-217ENST00000629136 DAXXQ9UER7 740 aaPredicted RBP12.32□□□□□ -0.44
CHD2-217ENST00000629136 ZNF215Q9UL58 517 aaPredicted RBP12.32□□□□□ -0.44
CHD2-217ENST00000629136 YBX2Q9Y2T7 364 aaKnown RBP12.32□□□□□ -0.44
CHD2-217ENST00000629136 CYP46A1Q9Y6A2 500 aa12.32□□□□□ -0.44
CHD2-217ENST00000629136 SLC4A7Q9Y6M7 1214 aa12.32□□□□□ -0.44
CHD2-217ENST00000629136 TRANK1O15050 2925 aa12.32□□□□□ -0.44
CHD2-217ENST00000629136 EMSYQ7Z589 1322 aa12.32□□□□□ -0.44
CHD2-217ENST00000629136 MAFGO15525 162 aa12.31□□□□□ -0.44
CHD2-217ENST00000629136 CENPBP07199 599 aaPredicted RBP12.31□□□□□ -0.44
CHD2-217ENST00000629136 ARP10275 920 aa12.31□□□□□ -0.44
CHD2-217ENST00000629136 ACTN1P12814 892 aa12.31□□□□□ -0.44
CHD2-217ENST00000629136 RABGGTBP53611 331 aa12.31□□□□□ -0.44
CHD2-217ENST00000629136 ITGB3BPQ13352 177 aaPredicted RBP12.31□□□□□ -0.44
CHD2-217ENST00000629136 GRIN2CQ14957 1233 aa12.31□□□□□ -0.44
CHD2-217ENST00000629136 CEP55Q53EZ4 464 aa12.31□□□□□ -0.44
CHD2-217ENST00000629136 JAKMIP3Q5VZ66 844 aa12.31□□□□□ -0.44
CHD2-217ENST00000629136 ATP6V0A1Q93050 837 aa12.31□□□□□ -0.44
CHD2-217ENST00000629136 GLT8D2Q9H1C3 349 aa12.31□□□□□ -0.44
CHD2-217ENST00000629136 NKX2-4Q9H2Z4 354 aa12.31□□□□□ -0.44
CHD2-217ENST00000629136 ZNF576Q9H609 170 aa12.31□□□□□ -0.44
CHD2-217ENST00000629136 SETD4Q9NVD3 440 aa12.31□□□□□ -0.44
CHD2-217ENST00000629136 NFASCO94856 1347 aa12.31□□□□□ -0.44
CHD2-217ENST00000629136 EVPLQ92817 2033 aa12.3□□□□□ -0.44
CHD2-217ENST00000629136 RALGAPA2Q2PPJ7 1873 aa12.3□□□□□ -0.44
CHD2-217ENST00000629136 IGLV3-22A0A075B6J6 115 aa12.3□□□□□ -0.44
CHD2-217ENST00000629136 FAM86B1E9PN63 330 aa12.3□□□□□ -0.44
CHD2-217ENST00000629136 MEIS1O00470 390 aa12.3□□□□□ -0.44
CHD2-217ENST00000629136 BAIAP3O94812 1187 aa12.3□□□□□ -0.44
CHD2-217ENST00000629136 PARNO95453 639 aaKnown RBP12.3□□□□□ -0.44
CHD2-217ENST00000629136 FAM86B2P0C5J1 330 aa12.3□□□□□ -0.44
CHD2-217ENST00000629136 ATP2A2P16615 1042 aaKnown RBP12.3□□□□□ -0.44
CHD2-217ENST00000629136 ARHGAP4P98171 946 aa12.3□□□□□ -0.44
CHD2-217ENST00000629136 RAB30Q15771 203 aa12.3□□□□□ -0.44
CHD2-217ENST00000629136 REXO1Q8N1G1 1221 aaKnown RBP12.3□□□□□ -0.44
CHD2-217ENST00000629136 CCDC12Q8WUD4 166 aaPredicted RBP12.3□□□□□ -0.44
CHD2-217ENST00000629136 LMBR1Q8WVP7 490 aa12.3□□□□□ -0.44
CHD2-217ENST00000629136 SEPT1Q8WYJ6 367 aa12.3□□□□□ -0.44
CHD2-217ENST00000629136 ZNF274Q96GC6 653 aaPredicted RBP12.3□□□□□ -0.44
CHD2-217ENST00000629136 SLC9A7Q96T83 725 aa12.3□□□□□ -0.44
CHD2-217ENST00000629136 PCYT2Q99447 389 aa12.3□□□□□ -0.44
CHD2-217ENST00000629136 LARP6Q9BRS8 491 aaKnown RBP12.3□□□□□ -0.44
CHD2-217ENST00000629136 SLC26A6Q9BXS9 759 aa12.3□□□□□ -0.44
CHD2-217ENST00000629136 FTOQ9C0B1 505 aaKnown RBP eCLIP12.3□□□□□ -0.44
CHD2-217ENST00000629136 JPH1Q9HDC5 661 aaPredicted RBP12.3□□□□□ -0.44
CHD2-217ENST00000629136 VPS54Q9P1Q0 977 aa12.3□□□□□ -0.44
CHD2-217ENST00000629136 SLC9A2Q9UBY0 812 aa12.3□□□□□ -0.44
CHD2-217ENST00000629136 ATG2AQ2TAZ0 1938 aa12.3□□□□□ -0.44
CHD2-217ENST00000629136 KIAA1671Q9BY89 1806 aa12.3□□□□□ -0.44
CHD2-217ENST00000629136 SPTBN5Q9NRC6 3674 aaKnown RBP12.29□□□□□ -0.44
CHD2-217ENST00000629136 LGR5O75473 907 aa12.29□□□□□ -0.44
CHD2-217ENST00000629136 CYP3A4P08684 503 aa12.29□□□□□ -0.44
CHD2-217ENST00000629136 MYOGP15173 224 aa12.29□□□□□ -0.44
CHD2-217ENST00000629136 FOSL2P15408 326 aa12.29□□□□□ -0.44
CHD2-217ENST00000629136 WDR5P61964 334 aaKnown RBP12.29□□□□□ -0.44
CHD2-217ENST00000629136 CNKSR3Q6P9H4 555 aa12.29□□□□□ -0.44
CHD2-217ENST00000629136 CCDC148Q8NFR7 591 aa12.29□□□□□ -0.44
CHD2-217ENST00000629136 RASGRP4Q8TDF6 673 aa12.29□□□□□ -0.44
CHD2-217ENST00000629136 AGO4Q9HCK5 861 aaKnown RBP12.29□□□□□ -0.44
CHD2-217ENST00000629136 C6orf50Q9HD87 102 aa12.29□□□□□ -0.44
CHD2-217ENST00000629136 PDRG1Q9NUG6 133 aa12.29□□□□□ -0.44
CHD2-217ENST00000629136 MSRAQ9UJ68 235 aa12.29□□□□□ -0.44
CHD2-217ENST00000629136 PCDHA11Q9Y5I1 949 aa12.29□□□□□ -0.44
CHD2-217ENST00000629136 MARK3P27448 753 aa12.28□□□□□ -0.44
CHD2-217ENST00000629136 GNA11P29992 359 aa12.28□□□□□ -0.44
CHD2-217ENST00000629136 THPOP40225 353 aa12.28□□□□□ -0.44
CHD2-217ENST00000629136 DEFB103AP81534 67 aa12.28□□□□□ -0.44
CHD2-217ENST00000629136 AKAP17AQ02040 695 aaKnown RBP12.28□□□□□ -0.44
CHD2-217ENST00000629136 STK3Q13188 491 aa12.28□□□□□ -0.44
CHD2-217ENST00000629136 MKRN4PQ13434 485 aaPredicted RBP12.28□□□□□ -0.44
CHD2-217ENST00000629136 NIPA1Q7RTP0 329 aa12.28□□□□□ -0.44
CHD2-217ENST00000629136 MAFAQ8NHW3 353 aaPredicted RBP12.28□□□□□ -0.44
CHD2-217ENST00000629136 OSBPL7Q9BZF2 842 aa12.28□□□□□ -0.44
CHD2-217ENST00000629136 ERAP1Q9NZ08 941 aa12.28□□□□□ -0.44
CHD2-217ENST00000629136 NRCAMQ92823 1304 aa12.28□□□□□ -0.44
CHD2-217ENST00000629136 COL4A6Q14031 1691 aa12.28□□□□□ -0.44
CHD2-217ENST00000629136 ARID2Q68CP9 1835 aa12.27□□□□□ -0.44
CHD2-217ENST00000629136 RSPH10B2B2RC85 870 aa12.27□□□□□ -0.45
CHD2-217ENST00000629136 DDX39AO00148 427 aaKnown RBP12.27□□□□□ -0.45
CHD2-217ENST00000629136 DHX15O43143 795 aaKnown RBP12.27□□□□□ -0.45
CHD2-217ENST00000629136 EDIL3O43854 480 aa12.27□□□□□ -0.45
CHD2-217ENST00000629136 CAND2O75155 1236 aa12.27□□□□□ -0.45
CHD2-217ENST00000629136 ARHGEF15O94989 841 aa12.27□□□□□ -0.45
CHD2-217ENST00000629136 ATG7O95352 703 aa12.27□□□□□ -0.45
CHD2-217ENST00000629136 CA3P07451 260 aa12.27□□□□□ -0.45
CHD2-217ENST00000629136 CTSHP09668 335 aa12.27□□□□□ -0.45
CHD2-217ENST00000629136 RSPH10BP0C881 870 aa12.27□□□□□ -0.45
CHD2-217ENST00000629136 GNAT1P11488 350 aa12.27□□□□□ -0.45
CHD2-217ENST00000629136 ZNF76P36508 570 aa12.27□□□□□ -0.45
CHD2-217ENST00000629136 ANAPC15P60006 121 aa12.27□□□□□ -0.45
CHD2-217ENST00000629136 ACTR2P61160 394 aa12.27□□□□□ -0.45
CHD2-217ENST00000629136 SCRN1Q12765 414 aa12.27□□□□□ -0.45
CHD2-217ENST00000629136 PPFIA1Q13136 1202 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms