RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-223ENST00000627587 AP5Z1O43299 807 aa10.69□□□□□ -0.7
PDLIM5-223ENST00000627587 IGHA2P01877 340 aa10.69□□□□□ -0.7
PDLIM5-223ENST00000627587 ALAS1P13196 640 aa10.69□□□□□ -0.7
PDLIM5-223ENST00000627587 SPIRE1Q08AE8 756 aa10.69□□□□□ -0.7
PDLIM5-223ENST00000627587 IQCB1Q15051 598 aa10.69□□□□□ -0.7
PDLIM5-223ENST00000627587 POSTNQ15063 836 aa10.69□□□□□ -0.7
PDLIM5-223ENST00000627587 STX1AQ16623 288 aa10.69□□□□□ -0.7
PDLIM5-223ENST00000627587 KANK3Q6NY19 840 aa10.69□□□□□ -0.7
PDLIM5-223ENST00000627587 FAM200AQ8TCP9 573 aa10.69□□□□□ -0.7
PDLIM5-223ENST00000627587 AK8Q96MA6 479 aa10.69□□□□□ -0.7
PDLIM5-223ENST00000627587 UIMC1Q96RL1 719 aa10.69□□□□□ -0.7
PDLIM5-223ENST00000627587 TTC12Q9H892 705 aaPredicted RBP10.69□□□□□ -0.7
PDLIM5-223ENST00000627587 DISC1Q9NRI5 854 aa10.69□□□□□ -0.7
PDLIM5-223ENST00000627587 FLRT1Q9NZU1 646 aa10.69□□□□□ -0.7
PDLIM5-223ENST00000627587 NRBP1Q9UHY1 535 aa10.69□□□□□ -0.7
PDLIM5-223ENST00000627587 FARP1Q9Y4F1 1045 aaPredicted RBP10.69□□□□□ -0.7
PDLIM5-223ENST00000627587 RANBP2P49792 3224 aaKnown RBP10.69□□□□□ -0.7
PDLIM5-223ENST00000627587 WDR81Q562E7 1941 aa10.69□□□□□ -0.7
PDLIM5-223ENST00000627587 FRMPD4Q14CM0 1322 aa10.69□□□□□ -0.7
PDLIM5-223ENST00000627587 KBTBD13C9JR72 458 aa10.68□□□□□ -0.7
PDLIM5-223ENST00000627587 TMEM266Q2M3C6 531 aa10.68□□□□□ -0.7
PDLIM5-223ENST00000627587 Q4G0T1 1027 aa10.68□□□□□ -0.7
PDLIM5-223ENST00000627587 Q7L0L9 218 aa10.68□□□□□ -0.7
PDLIM5-223ENST00000627587 LUZP1Q86V48 1076 aa10.68□□□□□ -0.7
PDLIM5-223ENST00000627587 IL31RAQ8NI17 732 aa10.68□□□□□ -0.7
PDLIM5-223ENST00000627587 NPLOC4Q8TAT6 608 aa10.68□□□□□ -0.7
PDLIM5-223ENST00000627587 STAMQ92783 540 aa10.68□□□□□ -0.7
PDLIM5-223ENST00000627587 MOV10L1Q9BXT6 1211 aaKnown RBP10.68□□□□□ -0.7
PDLIM5-223ENST00000627587 SPATC1LQ9H0A9 340 aa10.68□□□□□ -0.7
PDLIM5-223ENST00000627587 EHMT1Q9H9B1 1298 aa10.68□□□□□ -0.7
PDLIM5-223ENST00000627587 HOMER2Q9NSB8 354 aa10.68□□□□□ -0.7
PDLIM5-223ENST00000627587 USP25Q9UHP3 1055 aa10.68□□□□□ -0.7
PDLIM5-223ENST00000627587 SZT2Q5T011 3432 aa10.68□□□□□ -0.7
PDLIM5-223ENST00000627587 SEPT4O43236 478 aa10.68□□□□□ -0.7
PDLIM5-223ENST00000627587 MARCH6O60337 910 aa10.68□□□□□ -0.7
PDLIM5-223ENST00000627587 CAVIN2O95810 425 aa10.68□□□□□ -0.7
PDLIM5-223ENST00000627587 CYBAP13498 195 aa10.68□□□□□ -0.7
PDLIM5-223ENST00000627587 CD44P16070 742 aaKnown RBP10.68□□□□□ -0.7
PDLIM5-223ENST00000627587 UBA7P41226 1012 aa10.68□□□□□ -0.7
PDLIM5-223ENST00000627587 ZNF165P49910 485 aa10.68□□□□□ -0.7
PDLIM5-223ENST00000627587 RTP1P59025 263 aa10.68□□□□□ -0.7
PDLIM5-223ENST00000627587 NLRP12P59046 1061 aa10.68□□□□□ -0.7
PDLIM5-223ENST00000627587 DPYDQ12882 1025 aa10.68□□□□□ -0.7
PDLIM5-223ENST00000627587 GRB10Q13322 594 aa10.68□□□□□ -0.7
PDLIM5-223ENST00000627587 PDIA5Q14554 519 aa10.68□□□□□ -0.7
PDLIM5-223ENST00000627587 ECM1Q16610 540 aa10.68□□□□□ -0.7
PDLIM5-223ENST00000627587 PRR16Q569H4 304 aa10.68□□□□□ -0.7
PDLIM5-223ENST00000627587 ISM2Q6H9L7 571 aa10.68□□□□□ -0.7
PDLIM5-223ENST00000627587 SLC30A10Q6XR72 485 aa10.68□□□□□ -0.7
PDLIM5-223ENST00000627587 SLC39A5Q6ZMH5 540 aa10.68□□□□□ -0.7
PDLIM5-223ENST00000627587 MCF2L2Q86YR7 1114 aa10.68□□□□□ -0.7
PDLIM5-223ENST00000627587 DHX40Q8IX18 779 aaKnown RBP10.68□□□□□ -0.7
PDLIM5-223ENST00000627587 CEP57L1Q8IYX8 460 aa10.68□□□□□ -0.7
PDLIM5-223ENST00000627587 IQUBQ8NA54 791 aa10.68□□□□□ -0.7
PDLIM5-223ENST00000627587 ANP32BQ92688 251 aaKnown RBP10.68□□□□□ -0.7
PDLIM5-223ENST00000627587 RAB34Q9BZG1 259 aa10.68□□□□□ -0.7
PDLIM5-223ENST00000627587 ANO10Q9NW15 660 aa10.68□□□□□ -0.7
PDLIM5-223ENST00000627587 LRRC37A2A6NM11 1700 aa10.68□□□□□ -0.7
PDLIM5-223ENST00000627587 DOCK5Q9H7D0 1870 aa10.67□□□□□ -0.7
PDLIM5-223ENST00000627587 MSH4O15457 936 aa10.67□□□□□ -0.7
PDLIM5-223ENST00000627587 SLC25A27O95847 323 aa10.67□□□□□ -0.7
PDLIM5-223ENST00000627587 PLCG1P19174 1290 aa10.67□□□□□ -0.7
PDLIM5-223ENST00000627587 ADORA2AP29274 412 aa10.67□□□□□ -0.7
PDLIM5-223ENST00000627587 CYP2C19P33261 490 aa10.67□□□□□ -0.7
PDLIM5-223ENST00000627587 AFMP43652 599 aa10.67□□□□□ -0.7
PDLIM5-223ENST00000627587 OAZ1P54368 228 aa10.67□□□□□ -0.7
PDLIM5-223ENST00000627587 RPS6P62753 249 aaKnown RBP10.67□□□□□ -0.7
PDLIM5-223ENST00000627587 C1orf53Q5VUE5 145 aa10.67□□□□□ -0.7
PDLIM5-223ENST00000627587 CABP7Q86V35 215 aa10.67□□□□□ -0.7
PDLIM5-223ENST00000627587 RASSF8Q8NHQ8 419 aa10.67□□□□□ -0.7
PDLIM5-223ENST00000627587 SYTL5Q8TDW5 730 aaPredicted RBP10.67□□□□□ -0.7
PDLIM5-223ENST00000627587 ZFP91Q96JP5 570 aaPredicted RBP10.67□□□□□ -0.7
PDLIM5-223ENST00000627587 TRERF1Q96PN7 1200 aa10.67□□□□□ -0.7
PDLIM5-223ENST00000627587 PNMA5Q96PV4 448 aa10.67□□□□□ -0.7
PDLIM5-223ENST00000627587 PURBQ96QR8 312 aaKnown RBP10.67□□□□□ -0.7
PDLIM5-223ENST00000627587 PLIN2Q99541 437 aa10.67□□□□□ -0.7
PDLIM5-223ENST00000627587 MAN1B1Q9UKM7 699 aa10.67□□□□□ -0.7
PDLIM5-223ENST00000627587 FRMPD3Q5JV73 1810 aa10.67□□□□□ -0.7
PDLIM5-223ENST00000627587 ERCC3P19447 782 aa10.66□□□□□ -0.7
PDLIM5-223ENST00000627587 MORC3Q14149 939 aa10.66□□□□□ -0.7
PDLIM5-223ENST00000627587 UVSSAQ2YD98 709 aa10.66□□□□□ -0.7
PDLIM5-223ENST00000627587 SNRNP48Q6IEG0 339 aaKnown RBP10.66□□□□□ -0.7
PDLIM5-223ENST00000627587 SAMD3Q8N6K7 520 aa10.66□□□□□ -0.7
PDLIM5-223ENST00000627587 TRPV1Q8NER1 839 aa10.66□□□□□ -0.7
PDLIM5-223ENST00000627587 PDLIM2Q96JY6 352 aa10.66□□□□□ -0.7
PDLIM5-223ENST00000627587 RNF146Q9NTX7 359 aa10.66□□□□□ -0.7
PDLIM5-223ENST00000627587 BLOC1S4Q9NUP1 217 aa10.66□□□□□ -0.7
PDLIM5-223ENST00000627587 KBTBD4Q9NVX7 518 aa10.66□□□□□ -0.7
PDLIM5-223ENST00000627587 MAP3K20Q9NYL2 800 aaKnown RBP10.66□□□□□ -0.7
PDLIM5-223ENST00000627587 LRWD1Q9UFC0 647 aa10.66□□□□□ -0.7
PDLIM5-223ENST00000627587 CCDC39Q9UFE4 941 aa10.66□□□□□ -0.7
PDLIM5-223ENST00000627587 VAV3Q9UKW4 847 aa10.66□□□□□ -0.7
PDLIM5-223ENST00000627587 PCDHA12Q9UN75 941 aa10.66□□□□□ -0.7
PDLIM5-223ENST00000627587 ZNFX1Q9P2E3 1918 aaKnown RBP10.66□□□□□ -0.7
PDLIM5-223ENST00000627587 ZNF236Q9UL36 1845 aa10.66□□□□□ -0.7
PDLIM5-223ENST00000627587 TBX3O15119 743 aa10.66□□□□□ -0.7
PDLIM5-223ENST00000627587 FCER1AP12319 257 aa10.66□□□□□ -0.7
PDLIM5-223ENST00000627587 COPB2P35606 906 aa10.66□□□□□ -0.7
PDLIM5-223ENST00000627587 ZNF76P36508 570 aa10.66□□□□□ -0.7
PDLIM5-223ENST00000627587 STAT3P40763 770 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms