RNA–Protein interactions for RNA: ENST00000626028.1

SF1-220, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-220ENST00000626028 SCRN1Q12765 414 aa25.45■■□□□ 1.66
SF1-220ENST00000626028 STK3Q13188 491 aa25.45■■□□□ 1.66
SF1-220ENST00000626028 CYP2W1Q8TAV3 490 aa25.45■■□□□ 1.66
SF1-220ENST00000626028 PPP1R13LQ8WUF5 828 aa25.45■■□□□ 1.66
SF1-220ENST00000626028 TNPO1Q92973 898 aaKnown RBP25.45■■□□□ 1.66
SF1-220ENST00000626028 SCLYQ96I15 445 aa25.45■■□□□ 1.66
SF1-220ENST00000626028 SMARCAD1Q9H4L7 1026 aa25.45■■□□□ 1.66
SF1-220ENST00000626028 TPCN1Q9ULQ1 816 aa25.45■■□□□ 1.66
SF1-220ENST00000626028 GSTTP1A0A1W2PQM5 241 aa25.44■■□□□ 1.66
SF1-220ENST00000626028 CKBP12277 381 aa25.44■■□□□ 1.66
SF1-220ENST00000626028 CIITAP33076 1130 aa25.44■■□□□ 1.66
SF1-220ENST00000626028 USP11P51784 963 aa25.44■■□□□ 1.66
SF1-220ENST00000626028 DAGLBQ8NCG7 672 aa25.44■■□□□ 1.66
SF1-220ENST00000626028 DHX38Q92620 1227 aaKnown RBP25.44■■□□□ 1.66
SF1-220ENST00000626028 LARP6Q9BRS8 491 aaKnown RBP25.44■■□□□ 1.66
SF1-220ENST00000626028 PCDHA4Q9UN74 947 aa25.44■■□□□ 1.66
SF1-220ENST00000626028 IGLV3-22A0A075B6J6 115 aa25.43■■□□□ 1.66
SF1-220ENST00000626028 FAM86B1E9PN63 330 aa25.43■■□□□ 1.66
SF1-220ENST00000626028 LGR5O75473 907 aa25.43■■□□□ 1.66
SF1-220ENST00000626028 SEC24BO95487 1268 aa25.43■■□□□ 1.66
SF1-220ENST00000626028 FAM86B2P0C5J1 330 aa25.43■■□□□ 1.66
SF1-220ENST00000626028 ARP10275 920 aa25.43■■□□□ 1.66
SF1-220ENST00000626028 XBP1P17861 261 aa25.43■■□□□ 1.66
SF1-220ENST00000626028 SP4Q02446 784 aa25.43■■□□□ 1.66
SF1-220ENST00000626028 ZNF697Q5TEC3 545 aa25.43■■□□□ 1.66
SF1-220ENST00000626028 LRRC8DQ7L1W4 858 aa25.43■■□□□ 1.66
SF1-220ENST00000626028 ATP6V0A1Q93050 837 aa25.43■■□□□ 1.66
SF1-220ENST00000626028 VWCEQ96DN2 955 aa25.43■■□□□ 1.66
SF1-220ENST00000626028 RNPEPQ9H4A4 650 aa25.43■■□□□ 1.66
SF1-220ENST00000626028 SLC26A2P50443 739 aa25.42■■□□□ 1.66
SF1-220ENST00000626028 TRIM71Q2Q1W2 868 aaKnown RBP25.42■■□□□ 1.66
SF1-220ENST00000626028 UTP14CQ5TAP6 766 aaKnown RBP25.42■■□□□ 1.66
SF1-220ENST00000626028 PLA2G4DQ86XP0 818 aa25.42■■□□□ 1.66
SF1-220ENST00000626028 WASF1Q92558 559 aa25.42■■□□□ 1.66
SF1-220ENST00000626028 TBC1D22BQ9NU19 505 aa25.42■■□□□ 1.66
SF1-220ENST00000626028 MTMR10Q9NXD2 777 aa25.42■■□□□ 1.66
SF1-220ENST00000626028 BAIAP3O94812 1187 aa25.41■■□□□ 1.66
SF1-220ENST00000626028 ATG7O95352 703 aa25.41■■□□□ 1.66
SF1-220ENST00000626028 RPLP2P05387 115 aaKnown RBP25.41■■□□□ 1.66
SF1-220ENST00000626028 NEK4P51957 841 aa25.41■■□□□ 1.66
SF1-220ENST00000626028 ADAM17P78536 824 aa25.41■■□□□ 1.66
SF1-220ENST00000626028 OTOP2Q7RTS6 562 aa25.41■■□□□ 1.66
SF1-220ENST00000626028 PLPPR4Q7Z2D5 763 aa25.41■■□□□ 1.66
SF1-220ENST00000626028 TRIM50Q86XT4 487 aa25.41■■□□□ 1.66
SF1-220ENST00000626028 GLG1Q92896 1179 aa25.41■■□□□ 1.66
SF1-220ENST00000626028 AZI2Q9H6S1 392 aa25.41■■□□□ 1.66
SF1-220ENST00000626028 PKD2L1Q9P0L9 805 aa25.41■■□□□ 1.66
SF1-220ENST00000626028 IPO5O00410 1097 aaKnown RBP25.4■■□□□ 1.66
SF1-220ENST00000626028 PPFIA3O75145 1194 aa25.4■■□□□ 1.66
SF1-220ENST00000626028 CXCL10P02778 98 aa25.4■■□□□ 1.66
SF1-220ENST00000626028 ACTR2P61160 394 aa25.4■■□□□ 1.66
SF1-220ENST00000626028 ITGB3BPQ13352 177 aaPredicted RBP25.4■■□□□ 1.66
SF1-220ENST00000626028 HIC1Q14526 733 aa25.4■■□□□ 1.66
SF1-220ENST00000626028 DEFB128Q7Z7B8 93 aa25.4■■□□□ 1.66
SF1-220ENST00000626028 BLIDQ8IZY5 108 aa25.4■■□□□ 1.66
SF1-220ENST00000626028 IL27Q8NEV9 243 aa25.4■■□□□ 1.66
SF1-220ENST00000626028 SLC4A7Q9Y6M7 1214 aa25.4■■□□□ 1.66
SF1-220ENST00000626028 MYO9BQ13459 2157 aa25.39■■□□□ 1.66
SF1-220ENST00000626028 M0R2N6 131 aa25.39■■□□□ 1.66
SF1-220ENST00000626028 ZNF200P98182 395 aaPredicted RBP25.39■■□□□ 1.66
SF1-220ENST00000626028 C8orf34Q49A92 452 aa25.39■■□□□ 1.66
SF1-220ENST00000626028 RPAINQ86UA6 219 aa25.39■■□□□ 1.66
SF1-220ENST00000626028 GTF3C6Q969F1 213 aa25.39■■□□□ 1.66
SF1-220ENST00000626028 CXXC1Q9P0U4 656 aaPredicted RBP25.39■■□□□ 1.66
SF1-220ENST00000626028 TELO2Q9Y4R8 837 aa25.39■■□□□ 1.66
SF1-220ENST00000626028 MICAL3Q7RTP6 2002 aa25.39■■□□□ 1.65
SF1-220ENST00000626028 RRN3P2A6NIE6 340 aa25.38■■□□□ 1.65
SF1-220ENST00000626028 ADAMTS3O15072 1205 aa25.38■■□□□ 1.65
SF1-220ENST00000626028 DHX15O43143 795 aaKnown RBP25.38■■□□□ 1.65
SF1-220ENST00000626028 DNAJB2P25686 324 aa25.38■■□□□ 1.65
SF1-220ENST00000626028 RAB30Q15771 203 aa25.38■■□□□ 1.65
SF1-220ENST00000626028 TAF2Q6P1X5 1199 aa25.38■■□□□ 1.65
SF1-220ENST00000626028 Q7L0L9 218 aa25.38■■□□□ 1.65
SF1-220ENST00000626028 PHOSPHO2Q8TCD6 241 aa25.38■■□□□ 1.65
SF1-220ENST00000626028 LMBR1Q8WVP7 490 aa25.38■■□□□ 1.65
SF1-220ENST00000626028 ZNF577Q9BSK1 485 aa25.38■■□□□ 1.65
SF1-220ENST00000626028 FTOQ9C0B1 505 aaKnown RBP eCLIP25.38■■□□□ 1.65
SF1-220ENST00000626028 SETD4Q9NVD3 440 aa25.38■■□□□ 1.65
SF1-220ENST00000626028 IGKV6D-21A0A0A0MT36 114 aa25.37■■□□□ 1.65
SF1-220ENST00000626028 TREHO43280 583 aa25.37■■□□□ 1.65
SF1-220ENST00000626028 EFCAB14O75071 495 aa25.37■■□□□ 1.65
SF1-220ENST00000626028 ME3Q16798 604 aa25.37■■□□□ 1.65
SF1-220ENST00000626028 ZNF618Q5T7W0 954 aa25.37■■□□□ 1.65
SF1-220ENST00000626028 ZNF746Q6NUN9 644 aaPredicted RBP25.37■■□□□ 1.65
SF1-220ENST00000626028 MOXD1Q6UVY6 613 aa25.37■■□□□ 1.65
SF1-220ENST00000626028 SMAP1Q8IYB5 467 aaPredicted RBP25.37■■□□□ 1.65
SF1-220ENST00000626028 RASGRP4Q8TDF6 673 aa25.37■■□□□ 1.65
SF1-220ENST00000626028 PHF20Q9BVI0 1012 aa25.37■■□□□ 1.65
SF1-220ENST00000626028 TCEAL9Q9UHQ7 104 aa25.37■■□□□ 1.65
SF1-220ENST00000626028 COL6A3P12111 3177 aa25.37■■□□□ 1.65
SF1-220ENST00000626028 PTPRSQ13332 1948 aa25.36■■□□□ 1.65
SF1-220ENST00000626028 STAT5BP51692 787 aa25.36■■□□□ 1.65
SF1-220ENST00000626028 KRT76Q01546 638 aa25.36■■□□□ 1.65
SF1-220ENST00000626028 PPFIA1Q13136 1202 aa25.36■■□□□ 1.65
SF1-220ENST00000626028 NPY5RQ15761 445 aa25.36■■□□□ 1.65
SF1-220ENST00000626028 PRR16Q569H4 304 aa25.36■■□□□ 1.65
SF1-220ENST00000626028 CNKSR3Q6P9H4 555 aa25.36■■□□□ 1.65
SF1-220ENST00000626028 TRAF7Q6Q0C0 670 aa25.36■■□□□ 1.65
SF1-220ENST00000626028 KRT25Q7Z3Z0 450 aa25.36■■□□□ 1.65
SF1-220ENST00000626028 SLC9A7Q96T83 725 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms