RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 KIF28PB7ZC32 967 aa12.38□□□□□ -0.43
SSBP4-215ENST00000625926 TREHO43280 583 aa12.38□□□□□ -0.43
SSBP4-215ENST00000625926 RSPH10BP0C881 870 aa12.38□□□□□ -0.43
SSBP4-215ENST00000625926 MYOGP15173 224 aa12.38□□□□□ -0.43
SSBP4-215ENST00000625926 PDIA3P30101 505 aaKnown RBP12.38□□□□□ -0.43
SSBP4-215ENST00000625926 ZNF76P36508 570 aa12.38□□□□□ -0.43
SSBP4-215ENST00000625926 PLA2G5P39877 138 aa12.38□□□□□ -0.43
SSBP4-215ENST00000625926 CLK2P49760 499 aaKnown RBP12.38□□□□□ -0.43
SSBP4-215ENST00000625926 EVCP57679 992 aa12.38□□□□□ -0.43
SSBP4-215ENST00000625926 PPP2R2DQ66LE6 453 aa12.38□□□□□ -0.43
SSBP4-215ENST00000625926 MCTP2Q6DN12 878 aa12.38□□□□□ -0.43
SSBP4-215ENST00000625926 TRAF7Q6Q0C0 670 aa12.38□□□□□ -0.43
SSBP4-215ENST00000625926 HERC6Q8IVU3 1022 aa12.38□□□□□ -0.43
SSBP4-215ENST00000625926 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.38□□□□□ -0.432e-6■■■■□ 19.6
SSBP4-215ENST00000625926 CYP2W1Q8TAV3 490 aa12.38□□□□□ -0.43
SSBP4-215ENST00000625926 GLG1Q92896 1179 aa12.38□□□□□ -0.43
SSBP4-215ENST00000625926 PRDM12Q9H4Q4 367 aa12.38□□□□□ -0.43
SSBP4-215ENST00000625926 C6orf50Q9HD87 102 aa12.38□□□□□ -0.43
SSBP4-215ENST00000625926 ERAP1Q9NZ08 941 aa12.38□□□□□ -0.43
SSBP4-215ENST00000625926 RAPGEFL1Q9UHV5 662 aa12.38□□□□□ -0.43
SSBP4-215ENST00000625926 CYP46A1Q9Y6A2 500 aa12.38□□□□□ -0.43
SSBP4-215ENST00000625926 EMSYQ7Z589 1322 aa12.37□□□□□ -0.43
SSBP4-215ENST00000625926 NRCAMQ92823 1304 aa12.37□□□□□ -0.43
SSBP4-215ENST00000625926 ESYT2A0FGR8 921 aa12.37□□□□□ -0.43
SSBP4-215ENST00000625926 MEIS1O00470 390 aa12.37□□□□□ -0.43
SSBP4-215ENST00000625926 EFCAB14O75071 495 aa12.37□□□□□ -0.43
SSBP4-215ENST00000625926 CAND2O75155 1236 aa12.37□□□□□ -0.43
SSBP4-215ENST00000625926 LGR5O75473 907 aa12.37□□□□□ -0.43
SSBP4-215ENST00000625926 ARP10275 920 aa12.37□□□□□ -0.43
SSBP4-215ENST00000625926 GNA11P29992 359 aa12.37□□□□□ -0.43
SSBP4-215ENST00000625926 SREBF1P36956 1147 aa12.37□□□□□ -0.43
SSBP4-215ENST00000625926 ARHGAP4P98171 946 aa12.37□□□□□ -0.43
SSBP4-215ENST00000625926 IKBKEQ14164 716 aa12.37□□□□□ -0.43
SSBP4-215ENST00000625926 PKN1Q16512 942 aa12.37□□□□□ -0.43
SSBP4-215ENST00000625926 JAKMIP3Q5VZ66 844 aa12.37□□□□□ -0.43
SSBP4-215ENST00000625926 PHKBQ93100 1093 aa12.37□□□□□ -0.43
SSBP4-215ENST00000625926 SDF4Q9BRK5 362 aa12.37□□□□□ -0.43
SSBP4-215ENST00000625926 RNF26Q9BY78 433 aaPredicted RBP12.37□□□□□ -0.43
SSBP4-215ENST00000625926 TM6SF1Q9BZW5 370 aa12.37□□□□□ -0.43
SSBP4-215ENST00000625926 ZMYND12Q9H0C1 365 aa12.37□□□□□ -0.43
SSBP4-215ENST00000625926 SMARCAD1Q9H4L7 1026 aa12.37□□□□□ -0.43
SSBP4-215ENST00000625926 JPH1Q9HDC5 661 aaPredicted RBP12.37□□□□□ -0.43
SSBP4-215ENST00000625926 SLC9A2Q9UBY0 812 aa12.37□□□□□ -0.43
SSBP4-215ENST00000625926 LAMA2P24043 3122 aaKnown RBP12.37□□□□□ -0.43
SSBP4-215ENST00000625926 NID2Q14112 1375 aa12.36□□□□□ -0.43
SSBP4-215ENST00000625926 CA3P07451 260 aa12.36□□□□□ -0.43
SSBP4-215ENST00000625926 IFNAR1P17181 557 aa12.36□□□□□ -0.43
SSBP4-215ENST00000625926 WDR5P61964 334 aaKnown RBP12.36□□□□□ -0.43
SSBP4-215ENST00000625926 CCT2P78371 535 aaKnown RBP12.36□□□□□ -0.43
SSBP4-215ENST00000625926 ADAM17P78536 824 aa12.36□□□□□ -0.43
SSBP4-215ENST00000625926 MBTPS1Q14703 1052 aa12.36□□□□□ -0.43
SSBP4-215ENST00000625926 NTRK3Q16288 839 aa12.36□□□□□ -0.43
SSBP4-215ENST00000625926 LMBR1Q8WVP7 490 aa12.36□□□□□ -0.43
SSBP4-215ENST00000625926 TNPO1Q92973 898 aaKnown RBP12.36□□□□□ -0.43
SSBP4-215ENST00000625926 ZBED2Q9BTP6 218 aa12.36□□□□□ -0.43
SSBP4-215ENST00000625926 AZI2Q9H6S1 392 aa12.36□□□□□ -0.43
SSBP4-215ENST00000625926 AGO4Q9HCK5 861 aaKnown RBP12.36□□□□□ -0.43
SSBP4-215ENST00000625926 NFASCO94856 1347 aa12.36□□□□□ -0.43
SSBP4-215ENST00000625926 TLL1O43897 1013 aa12.35□□□□□ -0.43
SSBP4-215ENST00000625926 PPFIA3O75145 1194 aa12.35□□□□□ -0.43
SSBP4-215ENST00000625926 CYP3A4P08684 503 aa12.35□□□□□ -0.43
SSBP4-215ENST00000625926 IGFBP4P22692 258 aa12.35□□□□□ -0.43
SSBP4-215ENST00000625926 MARK3P27448 753 aa12.35□□□□□ -0.43
SSBP4-215ENST00000625926 HOXD11P31277 338 aaPredicted RBP12.35□□□□□ -0.43
SSBP4-215ENST00000625926 PPFIA1Q13136 1202 aa12.35□□□□□ -0.43
SSBP4-215ENST00000625926 TOB2Q14106 344 aaPredicted RBP12.35□□□□□ -0.43
SSBP4-215ENST00000625926 TAF2Q6P1X5 1199 aa12.35□□□□□ -0.43
SSBP4-215ENST00000625926 NIPA1Q7RTP0 329 aa12.35□□□□□ -0.43
SSBP4-215ENST00000625926 REXO1Q8N1G1 1221 aaKnown RBP12.35□□□□□ -0.43
SSBP4-215ENST00000625926 CCDC148Q8NFR7 591 aa12.35□□□□□ -0.43
SSBP4-215ENST00000625926 DBF4BQ8NFT6 615 aa12.35□□□□□ -0.43
SSBP4-215ENST00000625926 BICD2Q8TD16 824 aa12.35□□□□□ -0.43
SSBP4-215ENST00000625926 ZNF274Q96GC6 653 aaPredicted RBP12.35□□□□□ -0.43
SSBP4-215ENST00000625926 SLC26A6Q9BXS9 759 aa12.35□□□□□ -0.43
SSBP4-215ENST00000625926 NCOA5Q9HCD5 579 aaKnown RBP12.35□□□□□ -0.43
SSBP4-215ENST00000625926 SCN10AQ9Y5Y9 1956 aa12.35□□□□□ -0.43
SSBP4-215ENST00000625926 FAM86B1E9PN63 330 aa12.34□□□□□ -0.43
SSBP4-215ENST00000625926 CPLX1O14810 134 aa12.34□□□□□ -0.43
SSBP4-215ENST00000625926 CTSHP09668 335 aa12.34□□□□□ -0.43
SSBP4-215ENST00000625926 FAM86B2P0C5J1 330 aa12.34□□□□□ -0.43
SSBP4-215ENST00000625926 STAT5BP51692 787 aa12.34□□□□□ -0.43
SSBP4-215ENST00000625926 ACTR2P61160 394 aa12.34□□□□□ -0.43
SSBP4-215ENST00000625926 ITGB3BPQ13352 177 aaPredicted RBP12.34□□□□□ -0.43
SSBP4-215ENST00000625926 ADGRE1Q14246 886 aa12.34□□□□□ -0.43
SSBP4-215ENST00000625926 GRIK4Q16099 956 aa12.34□□□□□ -0.43
SSBP4-215ENST00000625926 TCTN1Q2MV58 587 aa12.34□□□□□ -0.43
SSBP4-215ENST00000625926 PLEKHG4Q58EX7 1191 aa12.34□□□□□ -0.43
SSBP4-215ENST00000625926 PLPPR4Q7Z2D5 763 aa12.34□□□□□ -0.43
SSBP4-215ENST00000625926 RPAINQ86UA6 219 aa12.34□□□□□ -0.43
SSBP4-215ENST00000625926 RSPH3Q86UC2 560 aa12.34□□□□□ -0.43
SSBP4-215ENST00000625926 PLA2G4DQ86XP0 818 aa12.34□□□□□ -0.43
SSBP4-215ENST00000625926 TRIM22Q8IYM9 498 aa12.34□□□□□ -0.43
SSBP4-215ENST00000625926 CRYGNQ8WXF5 182 aa12.34□□□□□ -0.43
SSBP4-215ENST00000625926 SEPT8Q92599 483 aa12.34□□□□□ -0.43
SSBP4-215ENST00000625926 PCYT2Q99447 389 aa12.34□□□□□ -0.43
SSBP4-215ENST00000625926 UPF3BQ9BZI7 483 aaKnown RBP12.34□□□□□ -0.43
SSBP4-215ENST00000625926 SH3GLB2Q9NR46 395 aa12.34□□□□□ -0.43
SSBP4-215ENST00000625926 PDRG1Q9NUG6 133 aa12.34□□□□□ -0.43
SSBP4-215ENST00000625926 RRN3P2A6NIE6 340 aa12.33□□□□□ -0.44
SSBP4-215ENST00000625926 ATG7O95352 703 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms