RNA–Protein interactions for RNA: ENST00000624720.1

USB1-216, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

Gene USB1, Length 2,895 nt, Biotype TEC, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-216ENST00000624720 TMEM87BQ96K49 555 aa10.04□□□□□ -0.8
USB1-216ENST00000624720 ZNF570Q96NI8 536 aa10.04□□□□□ -0.8
USB1-216ENST00000624720 PSKH2Q96QS6 385 aa10.04□□□□□ -0.8
USB1-216ENST00000624720 HNRNPABQ99729 332 aaKnown RBP10.04□□□□□ -0.8
USB1-216ENST00000624720 SEMA4AQ9H3S1 761 aa10.04□□□□□ -0.8
USB1-216ENST00000624720 TCF7L2Q9NQB0 619 aa10.04□□□□□ -0.8
USB1-216ENST00000624720 SH3TC1Q8TE82 1336 aa10.03□□□□□ -0.8
USB1-216ENST00000624720 GLULP15104 373 aa10.03□□□□□ -0.8
USB1-216ENST00000624720 ZAP70P43403 619 aa10.03□□□□□ -0.8
USB1-216ENST00000624720 IRAK1P51617 712 aa10.03□□□□□ -0.8
USB1-216ENST00000624720 TUBA3CQ13748 450 aa10.03□□□□□ -0.8
USB1-216ENST00000624720 BCL2A1Q16548 175 aa10.03□□□□□ -0.8
USB1-216ENST00000624720 ZNF746Q6NUN9 644 aaPredicted RBP10.03□□□□□ -0.8
USB1-216ENST00000624720 GALNT6Q8NCL4 622 aa10.03□□□□□ -0.8
USB1-216ENST00000624720 NSUN7Q8NE18 718 aaKnown RBP10.03□□□□□ -0.8
USB1-216ENST00000624720 WDR60Q8WVS4 1066 aa10.03□□□□□ -0.8
USB1-216ENST00000624720 CLMNQ96JQ2 1002 aa10.03□□□□□ -0.8
USB1-216ENST00000624720 CARD6Q9BX69 1037 aa10.03□□□□□ -0.8
USB1-216ENST00000624720 KCND1Q9NSA2 647 aa10.03□□□□□ -0.8
USB1-216ENST00000624720 SIPA1L3O60292 1781 aaPredicted RBP10.03□□□□□ -0.8
USB1-216ENST00000624720 CYTH3O43739 400 aa10.03□□□□□ -0.8
USB1-216ENST00000624720 DNAJC8O75937 253 aaPredicted RBP10.03□□□□□ -0.8
USB1-216ENST00000624720 ANP32DO95626 131 aa10.03□□□□□ -0.8
USB1-216ENST00000624720 VARSP26640 1264 aaKnown RBP10.03□□□□□ -0.8
USB1-216ENST00000624720 RFC4P35249 363 aa10.03□□□□□ -0.8
USB1-216ENST00000624720 IL15P40933 162 aaPredicted RBP10.03□□□□□ -0.8
USB1-216ENST00000624720 PCNX4Q63HM2 1172 aa10.03□□□□□ -0.8
USB1-216ENST00000624720 MCF2L2Q86YR7 1114 aa10.03□□□□□ -0.8
USB1-216ENST00000624720 LRRC8AQ8IWT6 810 aa10.03□□□□□ -0.8
USB1-216ENST00000624720 NPLOC4Q8TAT6 608 aa10.03□□□□□ -0.8
USB1-216ENST00000624720 TRPC4APQ8TEL6 797 aa10.03□□□□□ -0.8
USB1-216ENST00000624720 HNRNPLLQ8WVV9 542 aaKnown RBP10.03□□□□□ -0.8
USB1-216ENST00000624720 GLMNQ92990 594 aa10.03□□□□□ -0.8
USB1-216ENST00000624720 TBC1D20Q96BZ9 403 aa10.03□□□□□ -0.8
USB1-216ENST00000624720 BHMT2Q9H2M3 363 aa10.03□□□□□ -0.8
USB1-216ENST00000624720 TMA7Q9Y2S6 64 aaKnown RBP10.03□□□□□ -0.8
USB1-216ENST00000624720 SAMM50Q9Y512 469 aa10.03□□□□□ -0.8
USB1-216ENST00000624720 COL15A1P39059 1388 aa10.03□□□□□ -0.8
USB1-216ENST00000624720 ARPC4-TTLL3A0A0A6YYG9 625 aa10.02□□□□□ -0.8
USB1-216ENST00000624720 RNF40O75150 1001 aa10.02□□□□□ -0.8
USB1-216ENST00000624720 GSTT2P0CG29 244 aa10.02□□□□□ -0.8
USB1-216ENST00000624720 GSTT2BP0CG30 244 aa10.02□□□□□ -0.8
USB1-216ENST00000624720 CES1P23141 567 aa10.02□□□□□ -0.8
USB1-216ENST00000624720 STAT6P42226 847 aa10.02□□□□□ -0.8
USB1-216ENST00000624720 PHKA1P46020 1223 aa10.02□□□□□ -0.8
USB1-216ENST00000624720 PCSK7Q16549 785 aa10.02□□□□□ -0.8
USB1-216ENST00000624720 WDR45BQ5MNZ6 344 aa10.02□□□□□ -0.8
USB1-216ENST00000624720 NELL1Q92832 810 aa10.02□□□□□ -0.8
USB1-216ENST00000624720 RTCBQ9Y3I0 505 aaKnown RBP10.02□□□□□ -0.8
USB1-216ENST00000624720 A0A1W2PQ67 120 aa10.02□□□□□ -0.81
USB1-216ENST00000624720 N4BP3O15049 544 aa10.02□□□□□ -0.81
USB1-216ENST00000624720 DDX5P17844 614 aaKnown RBP10.02□□□□□ -0.81
USB1-216ENST00000624720 KIF5BP33176 963 aa10.02□□□□□ -0.81
USB1-216ENST00000624720 CETN2P41208 172 aa10.02□□□□□ -0.81
USB1-216ENST00000624720 UBASH3AP57075 661 aa10.02□□□□□ -0.81
USB1-216ENST00000624720 DRP2Q13474 957 aa10.02□□□□□ -0.81
USB1-216ENST00000624720 TAF11Q15544 211 aa10.02□□□□□ -0.81
USB1-216ENST00000624720 RNF187Q5TA31 235 aaPredicted RBP10.02□□□□□ -0.81
USB1-216ENST00000624720 TEX9Q8N6V9 391 aa10.02□□□□□ -0.81
USB1-216ENST00000624720 RNF25Q96BH1 459 aaPredicted RBP10.02□□□□□ -0.81
USB1-216ENST00000624720 PFDN4Q9NQP4 134 aa10.02□□□□□ -0.81
USB1-216ENST00000624720 TTC41PQ6P2S7 1318 aa10.02□□□□□ -0.81
USB1-216ENST00000624720 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.01□□□□□ -0.81
USB1-216ENST00000624720 CARNS1A5YM72 827 aa10.01□□□□□ -0.81
USB1-216ENST00000624720 BECN2A8MW95 431 aa10.01□□□□□ -0.81
USB1-216ENST00000624720 PDE8AO60658 829 aa10.01□□□□□ -0.81
USB1-216ENST00000624720 UPP2O95045 317 aa10.01□□□□□ -0.81
USB1-216ENST00000624720 CHKAP35790 457 aa10.01□□□□□ -0.81
USB1-216ENST00000624720 ZNF365Q70YC5 407 aa10.01□□□□□ -0.81
USB1-216ENST00000624720 SVIPQ8NHG7 77 aa10.01□□□□□ -0.81
USB1-216ENST00000624720 VCX3AQ9NNX9 186 aa10.01□□□□□ -0.81
USB1-216ENST00000624720 PAG1Q9NWQ8 432 aa10.01□□□□□ -0.81
USB1-216ENST00000624720 ZNF219Q9P2Y4 722 aaPredicted RBP10.01□□□□□ -0.81
USB1-216ENST00000624720 ZDHHC9Q9Y397 364 aa10.01□□□□□ -0.81
USB1-216ENST00000624720 RBM8AQ9Y5S9 174 aaKnown RBP10.01□□□□□ -0.81
USB1-216ENST00000624720 SPTLC1O15269 473 aa10.01□□□□□ -0.81
USB1-216ENST00000624720 ST18O60284 1047 aa10.01□□□□□ -0.81
USB1-216ENST00000624720 TACC1O75410 805 aa10.01□□□□□ -0.81
USB1-216ENST00000624720 ATP5DP30049 168 aa10.01□□□□□ -0.81
USB1-216ENST00000624720 MAN1A1P33908 653 aa10.01□□□□□ -0.81
USB1-216ENST00000624720 TNNI2P48788 182 aa10.01□□□□□ -0.81
USB1-216ENST00000624720 BCAMP50895 628 aa10.01□□□□□ -0.81
USB1-216ENST00000624720 NLRP5P59047 1200 aa10.01□□□□□ -0.81
USB1-216ENST00000624720 MKRN4PQ13434 485 aaPredicted RBP10.01□□□□□ -0.81
USB1-216ENST00000624720 TNIP1Q15025 636 aa10.01□□□□□ -0.81
USB1-216ENST00000624720 CRELD2Q6UXH1 353 aaPredicted RBP10.01□□□□□ -0.81
USB1-216ENST00000624720 NLRP9Q7RTR0 991 aa10.01□□□□□ -0.81
USB1-216ENST00000624720 ZNF34Q8IZ26 560 aa10.01□□□□□ -0.81
USB1-216ENST00000624720 NECAB1Q8N987 351 aa10.01□□□□□ -0.81
USB1-216ENST00000624720 SLAIN1Q8ND83 568 aa10.01□□□□□ -0.81
USB1-216ENST00000624720 SCG3Q8WXD2 468 aaKnown RBP10.01□□□□□ -0.81
USB1-216ENST00000624720 SKA1Q96BD8 255 aa10.01□□□□□ -0.81
USB1-216ENST00000624720 C8orf76Q96K31 380 aa10.01□□□□□ -0.81
USB1-216ENST00000624720 TRIM5Q9C035 493 aa10.01□□□□□ -0.81
USB1-216ENST00000624720 TPK1Q9H3S4 243 aa10.01□□□□□ -0.81
USB1-216ENST00000624720 CCPG1Q9ULG6 757 aa10.01□□□□□ -0.81
USB1-216ENST00000624720 RIMKLBQ9ULI2 386 aa10.01□□□□□ -0.81
USB1-216ENST00000624720 SATB2Q9UPW6 733 aa10.01□□□□□ -0.81
USB1-216ENST00000624720 SNX14Q9Y5W7 946 aa10.01□□□□□ -0.81
USB1-216ENST00000624720 GLI3P10071 1580 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms