RNA–Protein interactions for RNA: ENST00000622057.4

TARDBP-227, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 706 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-227ENST00000622057 PIK3CDO00329 1044 aa10.71□□□□□ -0.69
TARDBP-227ENST00000622057 SLC27A2O14975 620 aa10.71□□□□□ -0.69
TARDBP-227ENST00000622057 CAND2O75155 1236 aa10.71□□□□□ -0.69
TARDBP-227ENST00000622057 MARK3P27448 753 aa10.71□□□□□ -0.69
TARDBP-227ENST00000622057 TCF7P36402 384 aaPredicted RBP10.71□□□□□ -0.69
TARDBP-227ENST00000622057 HTRA4P83105 476 aaPredicted RBP10.71□□□□□ -0.69
TARDBP-227ENST00000622057 COL9A3Q14050 684 aaPredicted RBP10.71□□□□□ -0.69
TARDBP-227ENST00000622057 UBE2SQ16763 222 aa10.71□□□□□ -0.69
TARDBP-227ENST00000622057 EPC2Q52LR7 807 aa10.71□□□□□ -0.69
TARDBP-227ENST00000622057 LMBR1Q8WVP7 490 aa10.71□□□□□ -0.69
TARDBP-227ENST00000622057 SEPT1Q8WYJ6 367 aa10.71□□□□□ -0.69
TARDBP-227ENST00000622057 NRCAMQ92823 1304 aa10.71□□□□□ -0.69
TARDBP-227ENST00000622057 MTA3Q9BTC8 594 aa10.71□□□□□ -0.69
TARDBP-227ENST00000622057 LSG1Q9H089 658 aaKnown RBP10.71□□□□□ -0.69
TARDBP-227ENST00000622057 EPHX3Q9H6B9 360 aa10.71□□□□□ -0.69
TARDBP-227ENST00000622057 BAZ2BQ9UIF8 2168 aaKnown RBP10.71□□□□□ -0.69
TARDBP-227ENST00000622057 PCDHA6Q9UN73 950 aa10.71□□□□□ -0.69
TARDBP-227ENST00000622057 PCDHA8Q9Y5H6 950 aa10.71□□□□□ -0.69
TARDBP-227ENST00000622057 GSTTP1A0A1W2PQM5 241 aa10.7□□□□□ -0.7
TARDBP-227ENST00000622057 SPDYE3A6NKU9 549 aa10.7□□□□□ -0.7
TARDBP-227ENST00000622057 CALM1P0DP23 149 aa10.7□□□□□ -0.7
TARDBP-227ENST00000622057 CALM2P0DP24 149 aa10.7□□□□□ -0.7
TARDBP-227ENST00000622057 CALM3P0DP25 149 aa10.7□□□□□ -0.7
TARDBP-227ENST00000622057 GHRP10912 638 aa10.7□□□□□ -0.7
TARDBP-227ENST00000622057 KCNA2P16389 499 aa10.7□□□□□ -0.7
TARDBP-227ENST00000622057 ITGB5P18084 799 aa10.7□□□□□ -0.7
TARDBP-227ENST00000622057 LIFRP42702 1097 aa10.7□□□□□ -0.7
TARDBP-227ENST00000622057 IGBP1P78318 339 aa10.7□□□□□ -0.7
TARDBP-227ENST00000622057 ADAM17P78536 824 aa10.7□□□□□ -0.7
TARDBP-227ENST00000622057 MKRN4PQ13434 485 aaPredicted RBP10.7□□□□□ -0.7
TARDBP-227ENST00000622057 GPM6BQ13491 265 aa10.7□□□□□ -0.7
TARDBP-227ENST00000622057 FAM26DQ5JW98 314 aa10.7□□□□□ -0.7
TARDBP-227ENST00000622057 CREB3L3Q68CJ9 461 aa10.7□□□□□ -0.7
TARDBP-227ENST00000622057 SYNE3Q6ZMZ3 975 aa10.7□□□□□ -0.7
TARDBP-227ENST00000622057 EP400NLQ6ZTU2 488 aa10.7□□□□□ -0.7
TARDBP-227ENST00000622057 FANCBQ8NB91 859 aa10.7□□□□□ -0.7
TARDBP-227ENST00000622057 APBB2Q92870 758 aa10.7□□□□□ -0.7
TARDBP-227ENST00000622057 GLG1Q92896 1179 aa10.7□□□□□ -0.7
TARDBP-227ENST00000622057 GPRASP2Q96D09 838 aa10.7□□□□□ -0.7
TARDBP-227ENST00000622057 CDHR1Q96JP9 859 aa10.7□□□□□ -0.7
TARDBP-227ENST00000622057 ESYT1Q9BSJ8 1104 aa10.7□□□□□ -0.7
TARDBP-227ENST00000622057 C1QTNF1Q9BXJ1 281 aa10.7□□□□□ -0.7
TARDBP-227ENST00000622057 IFIH1Q9BYX4 1025 aaKnown RBP10.7□□□□□ -0.7
TARDBP-227ENST00000622057 UBE2ZQ9H832 354 aaPredicted RBP10.7□□□□□ -0.7
TARDBP-227ENST00000622057 ANO2Q9NQ90 1003 aa10.7□□□□□ -0.7
TARDBP-227ENST00000622057 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.69□□□□□ -0.7
TARDBP-227ENST00000622057 CHRNA1P02708 482 aa10.69□□□□□ -0.7
TARDBP-227ENST00000622057 KCNA5P22460 613 aa10.69□□□□□ -0.7
TARDBP-227ENST00000622057 PPFIA1Q13136 1202 aa10.69□□□□□ -0.7
TARDBP-227ENST00000622057 MTMR1Q13613 665 aa10.69□□□□□ -0.7
TARDBP-227ENST00000622057 NECTIN1Q15223 517 aa10.69□□□□□ -0.7
TARDBP-227ENST00000622057 PTPROQ16827 1216 aa10.69□□□□□ -0.7
TARDBP-227ENST00000622057 RUFY4Q6ZNE9 571 aa10.69□□□□□ -0.7
TARDBP-227ENST00000622057 HEATR3Q7Z4Q2 680 aa10.69□□□□□ -0.7
TARDBP-227ENST00000622057 RSPH3Q86UC2 560 aa10.69□□□□□ -0.7
TARDBP-227ENST00000622057 MICU3Q86XE3 530 aa10.69□□□□□ -0.7
TARDBP-227ENST00000622057 TMEM192Q8IY95 271 aa10.69□□□□□ -0.7
TARDBP-227ENST00000622057 SP7Q8TDD2 431 aaPredicted RBP10.69□□□□□ -0.7
TARDBP-227ENST00000622057 DNAJB3Q8WWF6 145 aa10.69□□□□□ -0.7
TARDBP-227ENST00000622057 IL17RAQ96F46 866 aa10.69□□□□□ -0.7
TARDBP-227ENST00000622057 SAMD11Q96NU1 681 aa10.69□□□□□ -0.7
TARDBP-227ENST00000622057 SMARCAD1Q9H4L7 1026 aa10.69□□□□□ -0.7
TARDBP-227ENST00000622057 JADE2Q9NQC1 790 aa10.69□□□□□ -0.7
TARDBP-227ENST00000622057 ERAP1Q9NZ08 941 aa10.69□□□□□ -0.7
TARDBP-227ENST00000622057 UBIAD1Q9Y5Z9 338 aa10.69□□□□□ -0.7
TARDBP-227ENST00000622057 REV3LO60673 3130 aa10.69□□□□□ -0.7
TARDBP-227ENST00000622057 TTC28Q96AY4 2481 aa10.69□□□□□ -0.7
TARDBP-227ENST00000622057 H3BNC9 293 aa10.68□□□□□ -0.7
TARDBP-227ENST00000622057 ENPP3O14638 875 aa10.68□□□□□ -0.7
TARDBP-227ENST00000622057 MAFGO15525 162 aa10.68□□□□□ -0.7
TARDBP-227ENST00000622057 GRIK4Q16099 956 aa10.68□□□□□ -0.7
TARDBP-227ENST00000622057 TAF2Q6P1X5 1199 aa10.68□□□□□ -0.7
TARDBP-227ENST00000622057 TMTC3Q6ZXV5 915 aa10.68□□□□□ -0.7
TARDBP-227ENST00000622057 FIBCD1Q8N539 461 aa10.68□□□□□ -0.7
TARDBP-227ENST00000622057 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.68□□□□□ -0.7
TARDBP-227ENST00000622057 ZBTB10Q96DT7 871 aa10.68□□□□□ -0.7
TARDBP-227ENST00000622057 MRPL38Q96DV4 380 aaKnown RBP10.68□□□□□ -0.7
TARDBP-227ENST00000622057 PGBD1Q96JS3 809 aa10.68□□□□□ -0.7
TARDBP-227ENST00000622057 EHMT1Q9H9B1 1298 aa10.68□□□□□ -0.7
TARDBP-227ENST00000622057 PTPRSQ13332 1948 aa10.68□□□□□ -0.7
TARDBP-227ENST00000622057 INSRRP14616 1297 aa10.67□□□□□ -0.7
TARDBP-227ENST00000622057 IL9P15248 144 aa10.67□□□□□ -0.7
TARDBP-227ENST00000622057 MGAT3Q09327 533 aa10.67□□□□□ -0.7
TARDBP-227ENST00000622057 LPIN1Q14693 890 aa10.67□□□□□ -0.7
TARDBP-227ENST00000622057 LEXMQ3ZCV2 418 aa10.67□□□□□ -0.7
TARDBP-227ENST00000622057 RPAINQ86UA6 219 aa10.67□□□□□ -0.7
TARDBP-227ENST00000622057 BANK1Q8NDB2 785 aa10.67□□□□□ -0.7
TARDBP-227ENST00000622057 CYP2W1Q8TAV3 490 aa10.67□□□□□ -0.7
TARDBP-227ENST00000622057 KHSRPQ92945 711 aaKnown RBP eCLIP10.67□□□□□ -0.71e-9■□□□□ 10.4
TARDBP-227ENST00000622057 TCEANC2Q96MN5 208 aa10.67□□□□□ -0.7
TARDBP-227ENST00000622057 NEK1Q96PY6 1258 aa10.67□□□□□ -0.7
TARDBP-227ENST00000622057 MXRA8Q9BRK3 442 aa10.67□□□□□ -0.7
TARDBP-227ENST00000622057 AZI2Q9H6S1 392 aa10.67□□□□□ -0.7
TARDBP-227ENST00000622057 CD320Q9NPF0 282 aa10.67□□□□□ -0.7
TARDBP-227ENST00000622057 SLC9A2Q9UBY0 812 aa10.67□□□□□ -0.7
TARDBP-227ENST00000622057 TUBE1Q9UJT0 475 aa10.67□□□□□ -0.7
TARDBP-227ENST00000622057 CDY2AQ9Y6F7 541 aa10.67□□□□□ -0.7
TARDBP-227ENST00000622057 RRN3P2A6NIE6 340 aa10.66□□□□□ -0.7
TARDBP-227ENST00000622057 H3BQ06 376 aaPredicted RBP10.66□□□□□ -0.7
TARDBP-227ENST00000622057 CSPG5O95196 566 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms