RNA–Protein interactions for RNA: ENST00000620854.4

NEDD9-216, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5 BASIC

Gene NEDD9, Length 4,086 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-216ENST00000620854 CYTH3O43739 400 aa7.61□□□□□ -1.19
NEDD9-216ENST00000620854 ITGA4P13612 1032 aa7.61□□□□□ -1.19
NEDD9-216ENST00000620854 GJC1P36383 396 aa7.61□□□□□ -1.19
NEDD9-216ENST00000620854 IFNAR2P48551 515 aa7.61□□□□□ -1.19
NEDD9-216ENST00000620854 EIF6P56537 245 aaKnown RBP7.61□□□□□ -1.19
NEDD9-216ENST00000620854 GSCP56915 257 aaPredicted RBP7.61□□□□□ -1.19
NEDD9-216ENST00000620854 ERVK-9P63128 1117 aa7.61□□□□□ -1.19
NEDD9-216ENST00000620854 DOK7Q18PE1 504 aa7.61□□□□□ -1.19
NEDD9-216ENST00000620854 FAM83BQ5T0W9 1011 aa7.61□□□□□ -1.19
NEDD9-216ENST00000620854 CCDC25Q86WR0 208 aa7.61□□□□□ -1.19
NEDD9-216ENST00000620854 LINC00116Q8NCU8 138 aa7.61□□□□□ -1.19
NEDD9-216ENST00000620854 ZNF384Q8TF68 577 aa7.61□□□□□ -1.19
NEDD9-216ENST00000620854 SELENOSQ9BQE4 189 aa7.61□□□□□ -1.19
NEDD9-216ENST00000620854 NUDT12Q9BQG2 462 aa7.61□□□□□ -1.19
NEDD9-216ENST00000620854 OSBPL7Q9BZF2 842 aa7.61□□□□□ -1.19
NEDD9-216ENST00000620854 FBXL5Q9UKA1 691 aa7.61□□□□□ -1.19
NEDD9-216ENST00000620854 ATP8A1Q9Y2Q0 1164 aa7.61□□□□□ -1.19
NEDD9-216ENST00000620854 FAM107AO95990 144 aa7.61□□□□□ -1.19
NEDD9-216ENST00000620854 OR52Z1P0C646 297 aa7.61□□□□□ -1.19
NEDD9-216ENST00000620854 CTNNA2P26232 953 aa7.61□□□□□ -1.19
NEDD9-216ENST00000620854 EN1Q05925 392 aaPredicted RBP7.61□□□□□ -1.19
NEDD9-216ENST00000620854 NFIXQ14938 502 aa7.61□□□□□ -1.19
NEDD9-216ENST00000620854 PPP2R5AQ15172 486 aa7.61□□□□□ -1.19
NEDD9-216ENST00000620854 RPS6KA1Q15418 735 aa7.61□□□□□ -1.19
NEDD9-216ENST00000620854 KRT79Q5XKE5 535 aa7.61□□□□□ -1.19
NEDD9-216ENST00000620854 KDM7AQ6ZMT4 941 aa7.61□□□□□ -1.19
NEDD9-216ENST00000620854 TBCKQ8TEA7 893 aa7.61□□□□□ -1.19
NEDD9-216ENST00000620854 SIK3Q9Y2K2 1263 aa7.61□□□□□ -1.19
NEDD9-216ENST00000620854 SART1O43290 800 aaKnown RBP7.6□□□□□ -1.19
NEDD9-216ENST00000620854 DDAH1O94760 285 aa7.6□□□□□ -1.19
NEDD9-216ENST00000620854 CLNS1AP54105 237 aaKnown RBP7.6□□□□□ -1.19
NEDD9-216ENST00000620854 MECOMQ03112 1051 aa7.6□□□□□ -1.19
NEDD9-216ENST00000620854 CETN1Q12798 172 aa7.6□□□□□ -1.19
NEDD9-216ENST00000620854 ITGB3BPQ13352 177 aaPredicted RBP7.6□□□□□ -1.19
NEDD9-216ENST00000620854 NEDD9Q14511 834 aa7.6□□□□□ -1.19
NEDD9-216ENST00000620854 PLS1Q14651 629 aa7.6□□□□□ -1.19
NEDD9-216ENST00000620854 MAN2A1Q16706 1144 aa7.6□□□□□ -1.19
NEDD9-216ENST00000620854 FAM133BQ5BKY9 247 aaKnown RBP7.6□□□□□ -1.19
NEDD9-216ENST00000620854 MAPKAPK5Q8IW41 473 aa7.6□□□□□ -1.19
NEDD9-216ENST00000620854 TEX2Q8IWB9 1127 aa7.6□□□□□ -1.19
NEDD9-216ENST00000620854 CUL5Q93034 780 aa7.6□□□□□ -1.19
NEDD9-216ENST00000620854 THOC1Q96FV9 657 aaKnown RBP7.6□□□□□ -1.19
NEDD9-216ENST00000620854 NEUROG2Q9H2A3 272 aa7.6□□□□□ -1.19
NEDD9-216ENST00000620854 CNOT8Q9UFF9 292 aaKnown RBP7.6□□□□□ -1.19
NEDD9-216ENST00000620854 KLRF2D3W0D1 207 aa7.6□□□□□ -1.19
NEDD9-216ENST00000620854 KRIT1O00522 736 aa7.6□□□□□ -1.19
NEDD9-216ENST00000620854 TLR2O60603 784 aa7.6□□□□□ -1.19
NEDD9-216ENST00000620854 CAMTA2O94983 1202 aa7.6□□□□□ -1.19
NEDD9-216ENST00000620854 NPR1P16066 1061 aa7.6□□□□□ -1.19
NEDD9-216ENST00000620854 PAX7P23759 505 aa7.6□□□□□ -1.19
NEDD9-216ENST00000620854 SLCO1A2P46721 670 aa7.6□□□□□ -1.19
NEDD9-216ENST00000620854 DHX9Q08211 1270 aaKnown RBP7.6□□□□□ -1.19
NEDD9-216ENST00000620854 SNCBQ16143 134 aa7.6□□□□□ -1.19
NEDD9-216ENST00000620854 RCSD1Q6JBY9 416 aa7.6□□□□□ -1.19
NEDD9-216ENST00000620854 CYB5D1Q6P9G0 228 aa7.6□□□□□ -1.19
NEDD9-216ENST00000620854 CAVIN3Q969G5 261 aa7.6□□□□□ -1.19
NEDD9-216ENST00000620854 TEKT1Q969V4 418 aa7.6□□□□□ -1.19
NEDD9-216ENST00000620854 TAOK3Q9H2K8 898 aa7.6□□□□□ -1.19
NEDD9-216ENST00000620854 SERPINA10Q9UK55 444 aa7.6□□□□□ -1.19
NEDD9-216ENST00000620854 FSBPO95073 299 aa7.6□□□□□ -1.19
NEDD9-216ENST00000620854 EPB41P11171 864 aaKnown RBP7.6□□□□□ -1.19
NEDD9-216ENST00000620854 ELF1P32519 619 aa7.6□□□□□ -1.19
NEDD9-216ENST00000620854 KCNMA1Q12791 1236 aa7.6□□□□□ -1.19
NEDD9-216ENST00000620854 DCAF17Q5H9S7 520 aaPredicted RBP7.6□□□□□ -1.19
NEDD9-216ENST00000620854 TMED8Q6PL24 325 aaPredicted RBP7.6□□□□□ -1.19
NEDD9-216ENST00000620854 KIAA0825Q8IV33 1275 aa7.6□□□□□ -1.19
NEDD9-216ENST00000620854 PARP9Q8IXQ6 854 aa7.6□□□□□ -1.19
NEDD9-216ENST00000620854 CACNA2D3Q8IZS8 1091 aa7.6□□□□□ -1.19
NEDD9-216ENST00000620854 TGFBRAP1Q8WUH2 860 aa7.6□□□□□ -1.19
NEDD9-216ENST00000620854 BAP1Q92560 729 aa7.6□□□□□ -1.19
NEDD9-216ENST00000620854 DDX12PQ92771 950 aa7.6□□□□□ -1.19
NEDD9-216ENST00000620854 CELF1Q92879 486 aaKnown RBP7.6□□□□□ -1.19
NEDD9-216ENST00000620854 SEC16BQ96JE7 1060 aa7.6□□□□□ -1.19
NEDD9-216ENST00000620854 TACO1Q9BSH4 297 aaKnown RBP7.6□□□□□ -1.19
NEDD9-216ENST00000620854 VCPKMTQ9H867 229 aa7.6□□□□□ -1.19
NEDD9-216ENST00000620854 IL17RBQ9NRM6 502 aa7.6□□□□□ -1.19
NEDD9-216ENST00000620854 L3MBTL1Q9Y468 752 aa7.6□□□□□ -1.19
NEDD9-216ENST00000620854 NPHP3-ACAD11A0A0J9YXS1 232 aa7.59□□□□□ -1.19
NEDD9-216ENST00000620854 CTNND1O60716 968 aaKnown RBP7.59□□□□□ -1.19
NEDD9-216ENST00000620854 POTEJP0CG39 1038 aa7.59□□□□□ -1.19
NEDD9-216ENST00000620854 EZRP15311 586 aaKnown RBP7.59□□□□□ -1.19
NEDD9-216ENST00000620854 TNNC1P63316 161 aa7.59□□□□□ -1.19
NEDD9-216ENST00000620854 CDC37Q16543 378 aaPredicted RBP7.59□□□□□ -1.19
NEDD9-216ENST00000620854 PDXDC1Q6P996 788 aa7.59□□□□□ -1.19
NEDD9-216ENST00000620854 KCNK18Q7Z418 384 aa7.59□□□□□ -1.19
NEDD9-216ENST00000620854 TBC1D1Q86TI0 1168 aaPredicted RBP7.59□□□□□ -1.19
NEDD9-216ENST00000620854 HOOK3Q86VS8 718 aa7.59□□□□□ -1.19
NEDD9-216ENST00000620854 ZNF34Q8IZ26 560 aa7.59□□□□□ -1.19
NEDD9-216ENST00000620854 FUKQ8N0W3 1084 aa7.59□□□□□ -1.19
NEDD9-216ENST00000620854 SNX29Q8TEQ0 813 aa7.59□□□□□ -1.19
NEDD9-216ENST00000620854 COA7Q96BR5 231 aa7.59□□□□□ -1.19
NEDD9-216ENST00000620854 CCSER1Q9C0I3 900 aa7.59□□□□□ -1.19
NEDD9-216ENST00000620854 GDF3Q9NR23 364 aa7.59□□□□□ -1.19
NEDD9-216ENST00000620854 ATF5Q9Y2D1 282 aaPredicted RBP7.59□□□□□ -1.19
NEDD9-216ENST00000620854 CD2APQ9Y5K6 639 aa7.59□□□□□ -1.19
NEDD9-216ENST00000620854 BAZ2AQ9UIF9 1905 aaKnown RBP7.59□□□□□ -1.19
NEDD9-216ENST00000620854 ATRNO75882 1429 aa7.59□□□□□ -1.19
NEDD9-216ENST00000620854 TTI1O43156 1089 aa7.59□□□□□ -1.19
NEDD9-216ENST00000620854 SMTNP53814 917 aa7.59□□□□□ -1.19
NEDD9-216ENST00000620854 DLGAP5Q15398 846 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms