RNA–Protein interactions for RNA: ENST00000618538.1

SEC22B-202, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

TSL 3

Gene SEC22B, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-202ENST00000618538 MTMR8Q96EF0 704 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 DRC1Q96MC2 740 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 NDST4Q9H3R1 872 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 DNAJC18Q9H819 358 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 C6orf50Q9HD87 102 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 GPCPD1Q9NPB8 672 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 PSD3Q9NYI0 1048 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 MAGEC2Q9UBF1 373 aaPredicted RBP4.8□□□□□ -1.64
SEC22B-202ENST00000618538 DMGDHQ9UI17 866 aaKnown RBP4.8□□□□□ -1.64
SEC22B-202ENST00000618538 HPCAL4Q9UM19 191 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 PCDHA2Q9Y5H9 948 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 PCDHAC2Q9Y5I4 1007 aa4.8□□□□□ -1.64
SEC22B-202ENST00000618538 ZNF646O15015 1829 aaPredicted RBP4.79□□□□□ -1.64
SEC22B-202ENST00000618538 MYH10P35580 1976 aa4.79□□□□□ -1.64
SEC22B-202ENST00000618538 BICDL2A1A5D9 508 aa4.79□□□□□ -1.64
SEC22B-202ENST00000618538 FAM196BA6NMK8 535 aa4.79□□□□□ -1.64
SEC22B-202ENST00000618538 USP17L10C9JJH3 530 aa4.79□□□□□ -1.64
SEC22B-202ENST00000618538 IDEP14735 1019 aa4.79□□□□□ -1.64
SEC22B-202ENST00000618538 SMARCA1P28370 1054 aa4.79□□□□□ -1.64
SEC22B-202ENST00000618538 GNA11P29992 359 aa4.79□□□□□ -1.64
SEC22B-202ENST00000618538 CXCR5P32302 372 aa4.79□□□□□ -1.64
SEC22B-202ENST00000618538 SLC1A4P43007 532 aa4.79□□□□□ -1.64
SEC22B-202ENST00000618538 TNNI2P48788 182 aa4.79□□□□□ -1.64
SEC22B-202ENST00000618538 AARSP49588 968 aaKnown RBP eCLIP4.79□□□□□ -1.64
SEC22B-202ENST00000618538 GFPT1Q06210 699 aaPredicted RBP4.79□□□□□ -1.64
SEC22B-202ENST00000618538 ZNF543Q08ER8 600 aa4.79□□□□□ -1.64
SEC22B-202ENST00000618538 SEMA3FQ13275 785 aa4.79□□□□□ -1.64
SEC22B-202ENST00000618538 ZSCAN26Q16670 478 aa4.79□□□□□ -1.64
SEC22B-202ENST00000618538 KCTD19Q17RG1 926 aaPredicted RBP4.79□□□□□ -1.64
SEC22B-202ENST00000618538 DPY19L2P1Q6NXN4 242 aa4.79□□□□□ -1.64
SEC22B-202ENST00000618538 CNNM4Q6P4Q7 775 aa4.79□□□□□ -1.64
SEC22B-202ENST00000618538 KIAA1328Q86T90 577 aa4.79□□□□□ -1.64
SEC22B-202ENST00000618538 C2CD5Q86YS7 1000 aa4.79□□□□□ -1.64
SEC22B-202ENST00000618538 CCDC170Q8IYT3 715 aa4.79□□□□□ -1.64
SEC22B-202ENST00000618538 ADGRF4Q8IZF3 695 aa4.79□□□□□ -1.64
SEC22B-202ENST00000618538 GUF1Q8N442 669 aaKnown RBP4.79□□□□□ -1.64
SEC22B-202ENST00000618538 ANKRD13CQ8N6S4 541 aa4.79□□□□□ -1.64
SEC22B-202ENST00000618538 RETREG2Q8NC44 543 aa4.79□□□□□ -1.64
SEC22B-202ENST00000618538 SNX29Q8TEQ0 813 aa4.79□□□□□ -1.64
SEC22B-202ENST00000618538 PSMB7Q99436 277 aa4.79□□□□□ -1.64
SEC22B-202ENST00000618538 WDR70Q9NW82 654 aa4.79□□□□□ -1.64
SEC22B-202ENST00000618538 NXF1Q9UBU9 619 aaKnown RBP4.79□□□□□ -1.64
SEC22B-202ENST00000618538 SNX12Q9UMY4 172 aa4.79□□□□□ -1.64
SEC22B-202ENST00000618538 COL11A2P13942 1736 aaPredicted RBP4.79□□□□□ -1.64
SEC22B-202ENST00000618538 PVALEFA0A1B0GWK0 134 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 ANO9A1A5B4 782 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 CCDC66A2RUB6 948 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 E9PMD0 336 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 F8W031 263 aaPredicted RBP4.78□□□□□ -1.64
SEC22B-202ENST00000618538 KRT86O43790 486 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 LDHCP07864 332 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 LORP23490 312 aaPredicted RBP4.78□□□□□ -1.64
SEC22B-202ENST00000618538 POLD1P28340 1107 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 CYLC1P35663 651 aaPredicted RBP4.78□□□□□ -1.64
SEC22B-202ENST00000618538 STAT3P40763 770 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 NT5C2P49902 561 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 ADCY7P51828 1080 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 CASP5P51878 434 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 GTF2IP78347 998 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 KRT83P78385 493 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 NFIAQ12857 509 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 COASYQ13057 564 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 MAN2A1Q16706 1144 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 TRAPPC3LQ5T215 181 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 PDXDC1Q6P996 788 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 SV2BQ7L1I2 683 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 ZNF572Q7Z3I7 529 aaPredicted RBP4.78□□□□□ -1.64
SEC22B-202ENST00000618538 DNAAF5Q86Y56 855 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 AMOTL1Q8IY63 956 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 TXLNBQ8N3L3 684 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 FNBP4Q8N3X1 1017 aaPredicted RBP4.78□□□□□ -1.64
SEC22B-202ENST00000618538 AENQ8WTP8 325 aaKnown RBP4.78□□□□□ -1.64
SEC22B-202ENST00000618538 SECISBP2LQ93073 1101 aaKnown RBP4.78□□□□□ -1.64
SEC22B-202ENST00000618538 NGLY1Q96IV0 654 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 LRRC1Q9BTT6 524 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 NUP58Q9BVL2 599 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 SELENOOQ9BVL4 669 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 TLR10Q9BXR5 811 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 IFIH1Q9BYX4 1025 aaKnown RBP4.78□□□□□ -1.64
SEC22B-202ENST00000618538 FAM204AQ9H8W3 233 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 RIC8AQ9NPQ8 531 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 PODXL2Q9NZ53 605 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 TBC1D7Q9P0N9 293 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 SEC63Q9UGP8 760 aaKnown RBP4.78□□□□□ -1.64
SEC22B-202ENST00000618538 GGA1Q9UJY5 639 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 PCDHA13Q9Y5I0 950 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 C10orf71Q711Q0 1435 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 MYH4Q9Y623 1939 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 TARSL2A2RTX5 802 aaKnown RBP4.78□□□□□ -1.64
SEC22B-202ENST00000618538 ZSCAN5CA6NGD5 496 aaPredicted RBP4.78□□□□□ -1.64
SEC22B-202ENST00000618538 USP17L15C9J2P7 530 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 USP17L13C9JLJ4 530 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 USP17L11C9JVI0 530 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 USP17L18D6R9N7 530 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 USP17L22D6RA61 530 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 USP17L17D6RBQ6 530 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 USP17L19D6RCP7 530 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 USP17L20D6RJB6 530 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 PJA2O43164 708 aa4.78□□□□□ -1.64
SEC22B-202ENST00000618538 MED24O75448 989 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms