RNA–Protein interactions for RNA: ENST00000618500.4

SNCA-213, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 3,022 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-213ENST00000618500 PTPDC1A2A3K4 754 aa5.37□□□□□ -1.55
SNCA-213ENST00000618500 PRR5-ARHGAP8B1AHC4 643 aa5.37□□□□□ -1.55
SNCA-213ENST00000618500 ENPP3O14638 875 aa5.37□□□□□ -1.55
SNCA-213ENST00000618500 THPOP40225 353 aa5.37□□□□□ -1.55
SNCA-213ENST00000618500 TDO2P48775 406 aa5.37□□□□□ -1.55
SNCA-213ENST00000618500 ARHGAP8P85298 464 aa5.37□□□□□ -1.55
SNCA-213ENST00000618500 PHLDB3Q6NSJ2 640 aa5.37□□□□□ -1.55
SNCA-213ENST00000618500 EEPD1Q7L9B9 569 aa5.37□□□□□ -1.55
SNCA-213ENST00000618500 FRMD5Q7Z6J6 570 aa5.37□□□□□ -1.55
SNCA-213ENST00000618500 ZNF710Q8N1W2 664 aa5.37□□□□□ -1.55
SNCA-213ENST00000618500 GIMAP8Q8ND71 665 aaPredicted RBP5.37□□□□□ -1.55
SNCA-213ENST00000618500 MRPL42Q9Y6G3 142 aaKnown RBP5.37□□□□□ -1.55
SNCA-213ENST00000618500 MUC6Q6W4X9 2439 aa5.37□□□□□ -1.55
SNCA-213ENST00000618500 MIA3Q5JRA6 1907 aa5.37□□□□□ -1.55
SNCA-213ENST00000618500 M0R2C6 588 aa5.37□□□□□ -1.55
SNCA-213ENST00000618500 LMNAP02545 664 aaKnown RBP5.37□□□□□ -1.55
SNCA-213ENST00000618500 HSPD1P10809 573 aaKnown RBP5.37□□□□□ -1.55
SNCA-213ENST00000618500 MCCP23508 829 aa5.37□□□□□ -1.55
SNCA-213ENST00000618500 DNAJB1P25685 340 aa5.37□□□□□ -1.55
SNCA-213ENST00000618500 ASPRV1Q53RT3 343 aa5.37□□□□□ -1.55
SNCA-213ENST00000618500 ZMYM1Q5SVZ6 1142 aa5.37□□□□□ -1.55
SNCA-213ENST00000618500 STOX1Q6ZVD7 989 aa5.37□□□□□ -1.55
SNCA-213ENST00000618500 KCTD1Q719H9 257 aa5.37□□□□□ -1.55
SNCA-213ENST00000618500 ADGRD2Q7Z7M1 963 aa5.37□□□□□ -1.55
SNCA-213ENST00000618500 DTWD2Q8NBA8 298 aa5.37□□□□□ -1.55
SNCA-213ENST00000618500 VN1R2Q8NFZ6 395 aa5.37□□□□□ -1.55
SNCA-213ENST00000618500 GPATCH3Q96I76 525 aa5.37□□□□□ -1.55
SNCA-213ENST00000618500 ADAM7Q9H2U9 754 aa5.37□□□□□ -1.55
SNCA-213ENST00000618500 NGRNQ9NPE2 291 aaKnown RBP5.37□□□□□ -1.55
SNCA-213ENST00000618500 INCENPQ9NQS7 918 aa5.37□□□□□ -1.55
SNCA-213ENST00000618500 ECHDC1Q9NTX5 307 aa5.37□□□□□ -1.55
SNCA-213ENST00000618500 FAM86C1Q9NVL1 165 aa5.37□□□□□ -1.55
SNCA-213ENST00000618500 ZNF215Q9UL58 517 aaPredicted RBP5.37□□□□□ -1.55
SNCA-213ENST00000618500 MTUS1Q9ULD2 1270 aa5.37□□□□□ -1.55
SNCA-213ENST00000618500 PIEZO1Q92508 2521 aa5.36□□□□□ -1.55
SNCA-213ENST00000618500 MED19A0JLT2 244 aaPredicted RBP5.36□□□□□ -1.55
SNCA-213ENST00000618500 SPTLC1O15269 473 aa5.36□□□□□ -1.55
SNCA-213ENST00000618500 SARSP49591 514 aaKnown RBP5.36□□□□□ -1.55
SNCA-213ENST00000618500 GIT2Q14161 759 aa5.36□□□□□ -1.55
SNCA-213ENST00000618500 LPIN1Q14693 890 aa5.36□□□□□ -1.55
SNCA-213ENST00000618500 LY6KQ17RY6 165 aa5.36□□□□□ -1.55
SNCA-213ENST00000618500 FBXO47Q5MNV8 452 aa5.36□□□□□ -1.55
SNCA-213ENST00000618500 ZC3H14Q6PJT7 736 aaKnown RBP5.36□□□□□ -1.55
SNCA-213ENST00000618500 RSPH3Q86UC2 560 aa5.36□□□□□ -1.55
SNCA-213ENST00000618500 DHX37Q8IY37 1157 aaKnown RBP5.36□□□□□ -1.55
SNCA-213ENST00000618500 FAM9BQ8IZU0 186 aa5.36□□□□□ -1.55
SNCA-213ENST00000618500 KREMEN2Q8NCW0 462 aa5.36□□□□□ -1.55
SNCA-213ENST00000618500 NELL1Q92832 810 aa5.36□□□□□ -1.55
SNCA-213ENST00000618500 ATP6V0A1Q93050 837 aa5.36□□□□□ -1.55
SNCA-213ENST00000618500 NXPE3Q969Y0 559 aa5.36□□□□□ -1.55
SNCA-213ENST00000618500 RMDN1Q96DB5 314 aa5.36□□□□□ -1.55
SNCA-213ENST00000618500 PURBQ96QR8 312 aaKnown RBP5.36□□□□□ -1.55
SNCA-213ENST00000618500 SENP7Q9BQF6 1050 aa5.36□□□□□ -1.55
SNCA-213ENST00000618500 RTKNQ9BST9 563 aa5.36□□□□□ -1.55
SNCA-213ENST00000618500 TLR9Q9NR96 1032 aa5.36□□□□□ -1.55
SNCA-213ENST00000618500 DUSP12Q9UNI6 340 aa5.36□□□□□ -1.55
SNCA-213ENST00000618500 EXOC6BQ9Y2D4 811 aa5.36□□□□□ -1.55
SNCA-213ENST00000618500 VCANP13611 3396 aa5.36□□□□□ -1.55
SNCA-213ENST00000618500 FOXP2O15409 715 aa5.36□□□□□ -1.55
SNCA-213ENST00000618500 LGALS2P05162 132 aa5.36□□□□□ -1.55
SNCA-213ENST00000618500 NPR3P17342 541 aa5.36□□□□□ -1.55
SNCA-213ENST00000618500 LAG3P18627 525 aa5.36□□□□□ -1.55
SNCA-213ENST00000618500 CALML3P27482 149 aa5.36□□□□□ -1.55
SNCA-213ENST00000618500 CCND2P30279 289 aa5.36□□□□□ -1.55
SNCA-213ENST00000618500 GSE1Q14687 1217 aa5.36□□□□□ -1.55
SNCA-213ENST00000618500 VSIG10LQ86VR7 867 aa5.36□□□□□ -1.55
SNCA-213ENST00000618500 DGKHQ86XP1 1220 aa5.36□□□□□ -1.55
SNCA-213ENST00000618500 NME8Q8N427 588 aa5.36□□□□□ -1.55
SNCA-213ENST00000618500 LINC01599Q8WXQ3 324 aa5.36□□□□□ -1.55
SNCA-213ENST00000618500 IER2Q9BTL4 223 aa5.36□□□□□ -1.55
SNCA-213ENST00000618500 USP26Q9BXU7 913 aa5.36□□□□□ -1.55
SNCA-213ENST00000618500 PCDHGC5Q9Y5F6 944 aa5.36□□□□□ -1.55
SNCA-213ENST00000618500 C2orf16Q68DN1 1984 aa5.35□□□□□ -1.55
SNCA-213ENST00000618500 COL1A2P08123 1366 aa5.35□□□□□ -1.55
SNCA-213ENST00000618500 CCER2I3L3R5 266 aa5.35□□□□□ -1.55
SNCA-213ENST00000618500 RAD21O60216 631 aa5.35□□□□□ -1.55
SNCA-213ENST00000618500 CHRNA1P02708 482 aa5.35□□□□□ -1.55
SNCA-213ENST00000618500 PPM1AP35813 382 aa5.35□□□□□ -1.55
SNCA-213ENST00000618500 IKQ13123 557 aaPredicted RBP5.35□□□□□ -1.55
SNCA-213ENST00000618500 BTG3Q14201 252 aaPredicted RBP5.35□□□□□ -1.55
SNCA-213ENST00000618500 NEDD9Q14511 834 aa5.35□□□□□ -1.55
SNCA-213ENST00000618500 SYCE2Q6PIF2 218 aa5.35□□□□□ -1.55
SNCA-213ENST00000618500 METTL7BQ6UX53 244 aa5.35□□□□□ -1.55
SNCA-213ENST00000618500 RSPO2Q6UXX9 243 aaPredicted RBP5.35□□□□□ -1.55
SNCA-213ENST00000618500 CMASQ8NFW8 434 aaPredicted RBP5.35□□□□□ -1.55
SNCA-213ENST00000618500 POF1BQ8WVV4 589 aa5.35□□□□□ -1.55
SNCA-213ENST00000618500 TMEM47Q9BQJ4 181 aa5.35□□□□□ -1.55
SNCA-213ENST00000618500 BOLA2Q9H3K6 86 aa5.35□□□□□ -1.55
SNCA-213ENST00000618500 COL20A1Q9P218 1284 aa5.35□□□□□ -1.55
SNCA-213ENST00000618500 TNNQ9UQP3 1299 aa5.35□□□□□ -1.55
SNCA-213ENST00000618500 NCOR1O75376 2440 aa5.35□□□□□ -1.55
SNCA-213ENST00000618500 TSPY2A6NKD2 308 aa5.35□□□□□ -1.55
SNCA-213ENST00000618500 MINDY4BA8MYZ0 360 aa5.35□□□□□ -1.55
SNCA-213ENST00000618500 SPATA31C2B4DYI2 1134 aa5.35□□□□□ -1.55
SNCA-213ENST00000618500 H3BRB1 525 aa5.35□□□□□ -1.55
SNCA-213ENST00000618500 ZNF286BP0CG31 522 aa5.35□□□□□ -1.55
SNCA-213ENST00000618500 UBA1P22314 1058 aaKnown RBP5.35□□□□□ -1.55
SNCA-213ENST00000618500 NRIP1P48552 1158 aa5.35□□□□□ -1.55
SNCA-213ENST00000618500 POLGP54098 1239 aaPredicted RBP5.35□□□□□ -1.55
SNCA-213ENST00000618500 TDRD5Q8NAT2 981 aaKnown RBP5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms