RNA–Protein interactions for RNA: ENST00000617564.1

COL4A2-210, Transcript of collagen type IV alpha 2 chain, humanhuman

Gene COL4A2, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-210ENST00000617564 SMIM10L2AP0DMW4 78 aa13.91□□□□□ -0.18
COL4A2-210ENST00000617564 SMIM10L2BP0DMW5 78 aa13.91□□□□□ -0.18
COL4A2-210ENST00000617564 GNAT1P11488 350 aa13.91□□□□□ -0.18
COL4A2-210ENST00000617564 HOXA13P31271 388 aaPredicted RBP13.91□□□□□ -0.18
COL4A2-210ENST00000617564 GNPTABQ3T906 1256 aa13.91□□□□□ -0.18
COL4A2-210ENST00000617564 EPC2Q52LR7 807 aa13.91□□□□□ -0.18
COL4A2-210ENST00000617564 EP400NLQ6ZTU2 488 aa13.91□□□□□ -0.18
COL4A2-210ENST00000617564 CHD1LQ86WJ1 897 aa13.91□□□□□ -0.18
COL4A2-210ENST00000617564 RNF135Q8IUD6 432 aa13.91□□□□□ -0.18
COL4A2-210ENST00000617564 FBXL6Q8N531 539 aa13.91□□□□□ -0.18
COL4A2-210ENST00000617564 APBB2Q92870 758 aa13.91□□□□□ -0.18
COL4A2-210ENST00000617564 YME1L1Q96TA2 773 aa13.91□□□□□ -0.18
COL4A2-210ENST00000617564 POP1Q99575 1024 aaKnown RBP13.91□□□□□ -0.18
COL4A2-210ENST00000617564 MYH7BA7E2Y1 1941 aa13.91□□□□□ -0.18
COL4A2-210ENST00000617564 MED19A0JLT2 244 aaPredicted RBP13.9□□□□□ -0.18
COL4A2-210ENST00000617564 PRR23AA6NEV1 266 aa13.9□□□□□ -0.18
COL4A2-210ENST00000617564 H3BNC9 293 aa13.9□□□□□ -0.18
COL4A2-210ENST00000617564 NOP56O00567 594 aaKnown RBP13.9□□□□□ -0.18
COL4A2-210ENST00000617564 ABCB7O75027 752 aa13.9□□□□□ -0.18
COL4A2-210ENST00000617564 ICAM3P32942 547 aa13.9□□□□□ -0.18
COL4A2-210ENST00000617564 SP2Q02086 613 aa13.9□□□□□ -0.18
COL4A2-210ENST00000617564 NEDD9Q14511 834 aa13.9□□□□□ -0.18
COL4A2-210ENST00000617564 GRM4Q14833 912 aa13.9□□□□□ -0.18
COL4A2-210ENST00000617564 COL19A1Q14993 1142 aa13.9□□□□□ -0.18
COL4A2-210ENST00000617564 METTL7BQ6UX53 244 aa13.9□□□□□ -0.18
COL4A2-210ENST00000617564 TOP1MTQ969P6 601 aa13.9□□□□□ -0.18
COL4A2-210ENST00000617564 INPP4AQ96PE3 977 aaPredicted RBP13.9□□□□□ -0.18
COL4A2-210ENST00000617564 USP26Q9BXU7 913 aa13.9□□□□□ -0.18
COL4A2-210ENST00000617564 RIOX1Q9H6W3 641 aa13.9□□□□□ -0.18
COL4A2-210ENST00000617564 ZNF215Q9UL58 517 aaPredicted RBP13.9□□□□□ -0.18
COL4A2-210ENST00000617564 DNAH14Q0VDD8 3507 aa13.89□□□□□ -0.19
COL4A2-210ENST00000617564 H0Y858 1186 aa13.89□□□□□ -0.19
COL4A2-210ENST00000617564 TREHO43280 583 aa13.89□□□□□ -0.19
COL4A2-210ENST00000617564 SORBS3O60504 671 aa13.89□□□□□ -0.19
COL4A2-210ENST00000617564 NUCB1Q02818 461 aa13.89□□□□□ -0.19
COL4A2-210ENST00000617564 GPM6BQ13491 265 aa13.89□□□□□ -0.19
COL4A2-210ENST00000617564 FCHSD1Q86WN1 690 aa13.89□□□□□ -0.19
COL4A2-210ENST00000617564 HOMER1Q86YM7 354 aa13.89□□□□□ -0.19
COL4A2-210ENST00000617564 TMEM192Q8IY95 271 aa13.89□□□□□ -0.19
COL4A2-210ENST00000617564 BANK1Q8NDB2 785 aa13.89□□□□□ -0.19
COL4A2-210ENST00000617564 GPKOWQ92917 476 aaPredicted RBP eCLIP13.89□□□□□ -0.19
COL4A2-210ENST00000617564 PABPC5Q96DU9 382 aaKnown RBP13.89□□□□□ -0.19
COL4A2-210ENST00000617564 RNPEPQ9H4A4 650 aa13.89□□□□□ -0.19
COL4A2-210ENST00000617564 NSUN3Q9H649 340 aaKnown RBP13.89□□□□□ -0.19
COL4A2-210ENST00000617564 TLR9Q9NR96 1032 aa13.89□□□□□ -0.19
COL4A2-210ENST00000617564 RALGAPA2Q2PPJ7 1873 aa13.89□□□□□ -0.19
COL4A2-210ENST00000617564 PNMA6FA0A0J9YX94 578 aa13.88□□□□□ -0.19
COL4A2-210ENST00000617564 FIBPO43427 364 aa13.88□□□□□ -0.19
COL4A2-210ENST00000617564 NCK2O43639 380 aa13.88□□□□□ -0.19
COL4A2-210ENST00000617564 TRDNQ13061 729 aa13.88□□□□□ -0.19
COL4A2-210ENST00000617564 SLC35G1Q2M3R5 365 aa13.88□□□□□ -0.19
COL4A2-210ENST00000617564 FAM26DQ5JW98 314 aa13.88□□□□□ -0.19
COL4A2-210ENST00000617564 B4GALNT3Q6L9W6 998 aa13.88□□□□□ -0.19
COL4A2-210ENST00000617564 CYB5R4Q7L1T6 521 aa13.88□□□□□ -0.19
COL4A2-210ENST00000617564 PIGSQ96S52 555 aa13.88□□□□□ -0.19
COL4A2-210ENST00000617564 GPR20Q99678 358 aa13.88□□□□□ -0.19
COL4A2-210ENST00000617564 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.87□□□□□ -0.19
COL4A2-210ENST00000617564 ERICH2A1L162 156 aa13.87□□□□□ -0.19
COL4A2-210ENST00000617564 SPATA31C2B4DYI2 1134 aa13.87□□□□□ -0.19
COL4A2-210ENST00000617564 C5orf67F2Z3F1 127 aa13.87□□□□□ -0.19
COL4A2-210ENST00000617564 IGHDP01880 384 aa13.87□□□□□ -0.19
COL4A2-210ENST00000617564 CTSHP09668 335 aa13.87□□□□□ -0.19
COL4A2-210ENST00000617564 VCPP55072 806 aaKnown RBP13.87□□□□□ -0.19
COL4A2-210ENST00000617564 ADAM17P78536 824 aa13.87□□□□□ -0.19
COL4A2-210ENST00000617564 MRPS9P82933 396 aaKnown RBP13.87□□□□□ -0.19
COL4A2-210ENST00000617564 SEMA3FQ13275 785 aa13.87□□□□□ -0.19
COL4A2-210ENST00000617564 TCEAL5Q5H9L2 206 aa13.87□□□□□ -0.19
COL4A2-210ENST00000617564 XRRA1Q6P2D8 792 aa13.87□□□□□ -0.19
COL4A2-210ENST00000617564 RPAINQ86UA6 219 aa13.87□□□□□ -0.19
COL4A2-210ENST00000617564 CNTNAP3BQ96NU0 1288 aa13.87□□□□□ -0.19
COL4A2-210ENST00000617564 IFIH1Q9BYX4 1025 aaKnown RBP13.87□□□□□ -0.19
COL4A2-210ENST00000617564 CNTNAP3Q9BZ76 1288 aa13.87□□□□□ -0.19
COL4A2-210ENST00000617564 LMAN2LQ9H0V9 348 aa13.87□□□□□ -0.19
COL4A2-210ENST00000617564 RWDD3Q9Y3V2 267 aa13.87□□□□□ -0.19
COL4A2-210ENST00000617564 CACNA1HO95180 2353 aa13.86□□□□□ -0.19
COL4A2-210ENST00000617564 CYTH3O43739 400 aa13.86□□□□□ -0.19
COL4A2-210ENST00000617564 RB1P06400 928 aa13.86□□□□□ -0.19
COL4A2-210ENST00000617564 SART3Q15020 963 aaKnown RBP13.86□□□□□ -0.19
COL4A2-210ENST00000617564 SMAD2Q15796 467 aaKnown RBP13.86□□□□□ -0.19
COL4A2-210ENST00000617564 CYFIP1Q7L576 1253 aa13.86□□□□□ -0.19
COL4A2-210ENST00000617564 LMBR1Q8WVP7 490 aa13.86□□□□□ -0.19
COL4A2-210ENST00000617564 IL17RAQ96F46 866 aa13.86□□□□□ -0.19
COL4A2-210ENST00000617564 ZFP91Q96JP5 570 aaPredicted RBP13.86□□□□□ -0.19
COL4A2-210ENST00000617564 SENP7Q9BQF6 1050 aa13.86□□□□□ -0.19
COL4A2-210ENST00000617564 SETD4Q9NVD3 440 aa13.86□□□□□ -0.19
COL4A2-210ENST00000617564 NRCAMQ92823 1304 aa13.86□□□□□ -0.19
COL4A2-210ENST00000617564 NLRC5Q86WI3 1866 aa13.85□□□□□ -0.19
COL4A2-210ENST00000617564 IFIT3O14879 490 aaKnown RBP13.85□□□□□ -0.19
COL4A2-210ENST00000617564 UPP2O95045 317 aa13.85□□□□□ -0.19
COL4A2-210ENST00000617564 AVPR2P30518 371 aa13.85□□□□□ -0.19
COL4A2-210ENST00000617564 CTNNB1P35222 781 aa13.85□□□□□ -0.19
COL4A2-210ENST00000617564 ZXDAP98168 799 aa13.85□□□□□ -0.19
COL4A2-210ENST00000617564 ARHGAP4P98171 946 aa13.85□□□□□ -0.19
COL4A2-210ENST00000617564 TROAPQ12815 778 aa13.85□□□□□ -0.19
COL4A2-210ENST00000617564 WTAPQ15007 396 aa13.85□□□□□ -0.19
COL4A2-210ENST00000617564 TAF2Q6P1X5 1199 aa13.85□□□□□ -0.19
COL4A2-210ENST00000617564 TRIM50Q86XT4 487 aa13.85□□□□□ -0.19
COL4A2-210ENST00000617564 FIBCD1Q8N539 461 aa13.85□□□□□ -0.19
COL4A2-210ENST00000617564 GIMAP8Q8ND71 665 aaPredicted RBP13.85□□□□□ -0.19
COL4A2-210ENST00000617564 C11orf84Q9BUA3 381 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms