RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 LRRC41Q15345 812 aa17.6■□□□□ 0.41
PCDHGC3-204ENST00000617222 TMEM266Q2M3C6 531 aa17.6■□□□□ 0.41
PCDHGC3-204ENST00000617222 BRDTQ58F21 947 aaPredicted RBP17.6■□□□□ 0.41
PCDHGC3-204ENST00000617222 ARL6IP4Q66PJ3 421 aaKnown RBP17.6■□□□□ 0.41
PCDHGC3-204ENST00000617222 NCAPH2Q6IBW4 605 aa17.6■□□□□ 0.41
PCDHGC3-204ENST00000617222 B3GNT9Q6UX72 402 aa17.6■□□□□ 0.41
PCDHGC3-204ENST00000617222 MIER3Q7Z3K6 550 aa17.6■□□□□ 0.41
PCDHGC3-204ENST00000617222 RNF180Q86T96 592 aa17.6■□□□□ 0.41
PCDHGC3-204ENST00000617222 ARRDC4Q8NCT1 418 aa17.6■□□□□ 0.41
PCDHGC3-204ENST00000617222 TNPO1Q92973 898 aaKnown RBP17.6■□□□□ 0.41
PCDHGC3-204ENST00000617222 CRISPLD2Q9H0B8 497 aa17.6■□□□□ 0.41
PCDHGC3-204ENST00000617222 OGDHLQ9ULD0 1010 aa17.6■□□□□ 0.41
PCDHGC3-204ENST00000617222 SAMM50Q9Y512 469 aa17.6■□□□□ 0.41
PCDHGC3-204ENST00000617222 ELP1O95163 1332 aa17.6■□□□□ 0.41
PCDHGC3-204ENST00000617222 VWA3AA6NCI4 1184 aa17.59■□□□□ 0.41
PCDHGC3-204ENST00000617222 WDR64B1ANS9 1081 aa17.59■□□□□ 0.41
PCDHGC3-204ENST00000617222 EML1O00423 815 aa17.59■□□□□ 0.41
PCDHGC3-204ENST00000617222 SPTLC2O15270 562 aa17.59■□□□□ 0.41
PCDHGC3-204ENST00000617222 ZEB2O60315 1214 aa17.59■□□□□ 0.41
PCDHGC3-204ENST00000617222 PPFIA4O75335 1185 aa17.59■□□□□ 0.41
PCDHGC3-204ENST00000617222 ATG7O95352 703 aa17.59■□□□□ 0.41
PCDHGC3-204ENST00000617222 MYL3P08590 195 aa17.59■□□□□ 0.41
PCDHGC3-204ENST00000617222 GJA8P48165 433 aa17.59■□□□□ 0.41
PCDHGC3-204ENST00000617222 FXR2P51116 673 aaKnown RBP eCLIP17.59■□□□□ 0.41
PCDHGC3-204ENST00000617222 SPIRE1Q08AE8 756 aa17.59■□□□□ 0.41
PCDHGC3-204ENST00000617222 KCNA10Q16322 511 aa17.59■□□□□ 0.41
PCDHGC3-204ENST00000617222 DGKDQ16760 1214 aa17.59■□□□□ 0.41
PCDHGC3-204ENST00000617222 UTP14CQ5TAP6 766 aaKnown RBP17.59■□□□□ 0.41
PCDHGC3-204ENST00000617222 MIS18BP1Q6P0N0 1132 aa17.59■□□□□ 0.41
PCDHGC3-204ENST00000617222 DISC1Q9NRI5 854 aa17.59■□□□□ 0.41
PCDHGC3-204ENST00000617222 RCOR1Q9UKL0 485 aa17.59■□□□□ 0.41
PCDHGC3-204ENST00000617222 PCDHA10Q9Y5I2 948 aa17.59■□□□□ 0.41
PCDHGC3-204ENST00000617222 POTEMA6NI47 508 aa17.58■□□□□ 0.4
PCDHGC3-204ENST00000617222 PSAPP07602 524 aa17.58■□□□□ 0.4
PCDHGC3-204ENST00000617222 CST5P28325 142 aaPredicted RBP17.58■□□□□ 0.4
PCDHGC3-204ENST00000617222 SFNP31947 248 aa17.58■□□□□ 0.4
PCDHGC3-204ENST00000617222 TCF7P36402 384 aaPredicted RBP17.58■□□□□ 0.4
PCDHGC3-204ENST00000617222 JAK3P52333 1124 aa17.58■□□□□ 0.4
PCDHGC3-204ENST00000617222 ABHD15Q6UXT9 468 aa17.58■□□□□ 0.4
PCDHGC3-204ENST00000617222 SMAP1Q8IYB5 467 aaPredicted RBP17.58■□□□□ 0.4
PCDHGC3-204ENST00000617222 LEO1Q8WVC0 666 aaPredicted RBP17.58■□□□□ 0.4
PCDHGC3-204ENST00000617222 ABHD8Q96I13 439 aa17.58■□□□□ 0.4
PCDHGC3-204ENST00000617222 FBXO2Q9UK22 296 aaPredicted RBP17.58■□□□□ 0.4
PCDHGC3-204ENST00000617222 SRPRBQ9Y5M8 271 aaKnown RBP17.58■□□□□ 0.4
PCDHGC3-204ENST00000617222 PPP6R2O75170 966 aa17.57■□□□□ 0.4
PCDHGC3-204ENST00000617222 SUPT20HL2P0C7V6 817 aa17.57■□□□□ 0.4
PCDHGC3-204ENST00000617222 HOXD8P13378 290 aaPredicted RBP17.57■□□□□ 0.4
PCDHGC3-204ENST00000617222 GRIN1Q05586 938 aa17.57■□□□□ 0.4
PCDHGC3-204ENST00000617222 PDIA5Q14554 519 aa17.57■□□□□ 0.4
PCDHGC3-204ENST00000617222 EPHA7Q15375 998 aa17.57■□□□□ 0.4
PCDHGC3-204ENST00000617222 CCSAPQ6IQ19 270 aaPredicted RBP17.57■□□□□ 0.4
PCDHGC3-204ENST00000617222 SWSAP1Q6NVH7 229 aa17.57■□□□□ 0.4
PCDHGC3-204ENST00000617222 TNS4Q8IZW8 715 aa17.57■□□□□ 0.4
PCDHGC3-204ENST00000617222 KRI1Q8N9T8 703 aaKnown RBP17.57■□□□□ 0.4
PCDHGC3-204ENST00000617222 PCSK9Q8NBP7 692 aaKnown RBP17.57■□□□□ 0.4
PCDHGC3-204ENST00000617222 RDM1Q8NG50 284 aa17.57■□□□□ 0.4
PCDHGC3-204ENST00000617222 KCNG4Q8TDN1 519 aa17.57■□□□□ 0.4
PCDHGC3-204ENST00000617222 FERMT2Q96AC1 680 aa17.57■□□□□ 0.4
PCDHGC3-204ENST00000617222 SPATA32Q96LK8 384 aa17.57■□□□□ 0.4
PCDHGC3-204ENST00000617222 CLIC6Q96NY7 704 aa17.57■□□□□ 0.4
PCDHGC3-204ENST00000617222 PCYT2Q99447 389 aa17.57■□□□□ 0.4
PCDHGC3-204ENST00000617222 RAB34Q9BZG1 259 aa17.57■□□□□ 0.4
PCDHGC3-204ENST00000617222 SCAND2PQ9GZW5 306 aaPredicted RBP17.57■□□□□ 0.4
PCDHGC3-204ENST00000617222 GDPD2Q9HCC8 539 aa17.57■□□□□ 0.4
PCDHGC3-204ENST00000617222 LRWD1Q9UFC0 647 aa17.57■□□□□ 0.4
PCDHGC3-204ENST00000617222 MORC2Q9Y6X9 1032 aaPredicted RBP17.57■□□□□ 0.4
PCDHGC3-204ENST00000617222 HTTP42858 3142 aa17.57■□□□□ 0.4
PCDHGC3-204ENST00000617222 BACH1O14867 736 aa17.56■□□□□ 0.4
PCDHGC3-204ENST00000617222 KPNA6O60684 536 aa17.56■□□□□ 0.4
PCDHGC3-204ENST00000617222 LGR5O75473 907 aa17.56■□□□□ 0.4
PCDHGC3-204ENST00000617222 LGALS2P05162 132 aa17.56■□□□□ 0.4
PCDHGC3-204ENST00000617222 ASGR1P07306 291 aa17.56■□□□□ 0.4
PCDHGC3-204ENST00000617222 CXCL17Q6UXB2 119 aa17.56■□□□□ 0.4
PCDHGC3-204ENST00000617222 IGSF22Q8N9C0 903 aa17.56■□□□□ 0.4
PCDHGC3-204ENST00000617222 GLG1Q92896 1179 aa17.56■□□□□ 0.4
PCDHGC3-204ENST00000617222 TSEN34Q9BSV6 310 aaKnown RBP17.56■□□□□ 0.4
PCDHGC3-204ENST00000617222 GABBR1Q9UBS5 961 aa17.56■□□□□ 0.4
PCDHGC3-204ENST00000617222 IGKV6D-21A0A0A0MT36 114 aa17.55■□□□□ 0.4
PCDHGC3-204ENST00000617222 PP2D1A8MPX8 630 aa17.55■□□□□ 0.4
PCDHGC3-204ENST00000617222 KBTBD13C9JR72 458 aa17.55■□□□□ 0.4
PCDHGC3-204ENST00000617222 DNM1LO00429 736 aa17.55■□□□□ 0.4
PCDHGC3-204ENST00000617222 ZNF286BP0CG31 522 aa17.55■□□□□ 0.4
PCDHGC3-204ENST00000617222 CDC25AP30304 524 aa17.55■□□□□ 0.4
PCDHGC3-204ENST00000617222 ME1P48163 572 aa17.55■□□□□ 0.4
PCDHGC3-204ENST00000617222 STAT5BP51692 787 aa17.55■□□□□ 0.4
PCDHGC3-204ENST00000617222 PURAQ00577 322 aaKnown RBP17.55■□□□□ 0.4
PCDHGC3-204ENST00000617222 SPECC1Q5M775 1068 aa17.55■□□□□ 0.4
PCDHGC3-204ENST00000617222 TRIM50Q86XT4 487 aa17.55■□□□□ 0.4
PCDHGC3-204ENST00000617222 CCDC60Q8IWA6 550 aaPredicted RBP17.55■□□□□ 0.4
PCDHGC3-204ENST00000617222 DYDC2Q96IM9 177 aa17.55■□□□□ 0.4
PCDHGC3-204ENST00000617222 EIF2AK1Q9BQI3 630 aaKnown RBP17.55■□□□□ 0.4
PCDHGC3-204ENST00000617222 C16orf70Q9BSU1 422 aa17.55■□□□□ 0.4
PCDHGC3-204ENST00000617222 MTG1Q9BT17 334 aaPredicted RBP17.55■□□□□ 0.4
PCDHGC3-204ENST00000617222 CSRNP2Q9H175 543 aa17.55■□□□□ 0.4
PCDHGC3-204ENST00000617222 SMARCAD1Q9H4L7 1026 aa17.55■□□□□ 0.4
PCDHGC3-204ENST00000617222 AZI2Q9H6S1 392 aa17.55■□□□□ 0.4
PCDHGC3-204ENST00000617222 ZNF302Q9NR11 478 aa17.55■□□□□ 0.4
PCDHGC3-204ENST00000617222 RGL1Q9NZL6 768 aa17.55■□□□□ 0.4
PCDHGC3-204ENST00000617222 PCDHA7Q9UN72 937 aa17.55■□□□□ 0.4
PCDHGC3-204ENST00000617222 P4HBP07237 508 aaKnown RBP17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms