RNA–Protein interactions for RNA: ENST00000615732.1

COL4A1-205, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 5

Gene COL4A1, Length 1,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-205ENST00000615732 FOXP1Q9H334 677 aaPredicted RBP12.21□□□□□ -0.45
COL4A1-205ENST00000615732 TSPY26PQ9H489 355 aa12.21□□□□□ -0.45
COL4A1-205ENST00000615732 VPS54Q9P1Q0 977 aa12.21□□□□□ -0.45
COL4A1-205ENST00000615732 COL20A1Q9P218 1284 aa12.21□□□□□ -0.45
COL4A1-205ENST00000615732 COL4A4P53420 1690 aaPredicted RBP12.21□□□□□ -0.45
COL4A1-205ENST00000615732 TCF20Q9UGU0 1960 aaKnown RBP12.21□□□□□ -0.46
COL4A1-205ENST00000615732 SCN10AQ9Y5Y9 1956 aa12.2□□□□□ -0.46
COL4A1-205ENST00000615732 LOC102724159A0A0B4J2E5 919 aa12.2□□□□□ -0.46
COL4A1-205ENST00000615732 EPOPA6NHQ4 379 aa12.2□□□□□ -0.46
COL4A1-205ENST00000615732 SPTLC2O15270 562 aa12.2□□□□□ -0.46
COL4A1-205ENST00000615732 ARHGEF15O94989 841 aa12.2□□□□□ -0.46
COL4A1-205ENST00000615732 PFKMP08237 780 aa12.2□□□□□ -0.46
COL4A1-205ENST00000615732 TXNP10599 105 aaKnown RBP12.2□□□□□ -0.46
COL4A1-205ENST00000615732 BMP1P13497 986 aa12.2□□□□□ -0.46
COL4A1-205ENST00000615732 SCG2P13521 617 aa12.2□□□□□ -0.46
COL4A1-205ENST00000615732 U2AF2P26368 475 aaKnown RBP eCLIP12.2□□□□□ -0.46
COL4A1-205ENST00000615732 NASPP49321 788 aaPredicted RBP12.2□□□□□ -0.46
COL4A1-205ENST00000615732 KCNQ1P51787 676 aa12.2□□□□□ -0.46
COL4A1-205ENST00000615732 PWP2Q15269 919 aaKnown RBP12.2□□□□□ -0.46
COL4A1-205ENST00000615732 GPATCH4Q5T3I0 446 aaKnown RBP12.2□□□□□ -0.46
COL4A1-205ENST00000615732 SEPT14Q6ZU15 432 aa12.2□□□□□ -0.46
COL4A1-205ENST00000615732 NOSTRINQ8IVI9 506 aa12.2□□□□□ -0.46
COL4A1-205ENST00000615732 DNERQ8NFT8 737 aa12.2□□□□□ -0.46
COL4A1-205ENST00000615732 PIBF1Q8WXW3 757 aa12.2□□□□□ -0.46
COL4A1-205ENST00000615732 PGBD1Q96JS3 809 aa12.2□□□□□ -0.46
COL4A1-205ENST00000615732 TSPYL2Q9H2G4 693 aaPredicted RBP12.2□□□□□ -0.46
COL4A1-205ENST00000615732 CERS4Q9HA82 394 aa12.2□□□□□ -0.46
COL4A1-205ENST00000615732 CLIC4Q9Y696 253 aa12.2□□□□□ -0.46
COL4A1-205ENST00000615732 NCOR1O75376 2440 aa12.2□□□□□ -0.46
COL4A1-205ENST00000615732 hCG_1642624A0A1W2PR95 340 aa12.19□□□□□ -0.46
COL4A1-205ENST00000615732 A6NJR5 290 aa12.19□□□□□ -0.46
COL4A1-205ENST00000615732 BTBD18B2RXH4 712 aa12.19□□□□□ -0.46
COL4A1-205ENST00000615732 NKRFO15226 690 aaKnown RBP eCLIP12.19□□□□□ -0.46
COL4A1-205ENST00000615732 SUPT20HL2P0C7V6 817 aa12.19□□□□□ -0.46
COL4A1-205ENST00000615732 LIG1P18858 919 aa12.19□□□□□ -0.46
COL4A1-205ENST00000615732 EIF2AK2P19525 551 aaKnown RBP12.19□□□□□ -0.46
COL4A1-205ENST00000615732 NLRP5P59047 1200 aa12.19□□□□□ -0.46
COL4A1-205ENST00000615732 PKN1Q16512 942 aa12.19□□□□□ -0.46
COL4A1-205ENST00000615732 PFKFB3Q16875 520 aaPredicted RBP12.19□□□□□ -0.46
COL4A1-205ENST00000615732 LY6KQ17RY6 165 aa12.19□□□□□ -0.46
COL4A1-205ENST00000615732 QRICH1Q2TAL8 776 aa12.19□□□□□ -0.46
COL4A1-205ENST00000615732 BRDTQ58F21 947 aaPredicted RBP12.19□□□□□ -0.46
COL4A1-205ENST00000615732 GAS2L3Q86XJ1 694 aa12.19□□□□□ -0.46
COL4A1-205ENST00000615732 ADGRF4Q8IZF3 695 aa12.19□□□□□ -0.46
COL4A1-205ENST00000615732 FSIP1Q8NA03 581 aa12.19□□□□□ -0.46
COL4A1-205ENST00000615732 LINC00301Q8NCQ3 95 aa12.19□□□□□ -0.46
COL4A1-205ENST00000615732 SYTL5Q8TDW5 730 aaPredicted RBP12.19□□□□□ -0.46
COL4A1-205ENST00000615732 AFG1LQ8WV93 481 aa12.19□□□□□ -0.46
COL4A1-205ENST00000615732 ANP32BQ92688 251 aaKnown RBP12.19□□□□□ -0.46
COL4A1-205ENST00000615732 TAAR1Q96RJ0 339 aa12.19□□□□□ -0.46
COL4A1-205ENST00000615732 MPHOSPH6Q99547 160 aaKnown RBP12.19□□□□□ -0.46
COL4A1-205ENST00000615732 MAD2L2Q9UI95 211 aa12.19□□□□□ -0.46
COL4A1-205ENST00000615732 NOL7Q9UMY1 257 aaKnown RBP12.19□□□□□ -0.46
COL4A1-205ENST00000615732 NOD1Q9Y239 953 aa12.19□□□□□ -0.46
COL4A1-205ENST00000615732 MTCH2Q9Y6C9 303 aa12.19□□□□□ -0.46
COL4A1-205ENST00000615732 PTPRSQ13332 1948 aa12.19□□□□□ -0.46
COL4A1-205ENST00000615732 ABCB11O95342 1321 aa12.18□□□□□ -0.46
COL4A1-205ENST00000615732 SORBS3O60504 671 aa12.18□□□□□ -0.46
COL4A1-205ENST00000615732 PLA2G5P39877 138 aa12.18□□□□□ -0.46
COL4A1-205ENST00000615732 ARHGAP1Q07960 439 aa12.18□□□□□ -0.46
COL4A1-205ENST00000615732 SKIV2LQ15477 1246 aaKnown RBP12.18□□□□□ -0.46
COL4A1-205ENST00000615732 ASPRV1Q53RT3 343 aa12.18□□□□□ -0.46
COL4A1-205ENST00000615732 RILPL1Q5EBL4 403 aa12.18□□□□□ -0.46
COL4A1-205ENST00000615732 NFRKBQ6P4R8 1299 aa12.18□□□□□ -0.46
COL4A1-205ENST00000615732 SPRED2Q7Z698 418 aa12.18□□□□□ -0.46
COL4A1-205ENST00000615732 STAG2Q8N3U4 1231 aa12.18□□□□□ -0.46
COL4A1-205ENST00000615732 CCDC148Q8NFR7 591 aa12.18□□□□□ -0.46
COL4A1-205ENST00000615732 MRPS27Q92552 414 aaKnown RBP12.18□□□□□ -0.46
COL4A1-205ENST00000615732 PHF20Q9BVI0 1012 aa12.18□□□□□ -0.46
COL4A1-205ENST00000615732 TNMDQ9H2S6 317 aa12.18□□□□□ -0.46
COL4A1-205ENST00000615732 VAT1LQ9HCJ6 419 aa12.18□□□□□ -0.46
COL4A1-205ENST00000615732 DACT1Q9NYF0 836 aa12.18□□□□□ -0.46
COL4A1-205ENST00000615732 SEC63Q9UGP8 760 aaKnown RBP12.18□□□□□ -0.46
COL4A1-205ENST00000615732 PNMA2Q9UL42 364 aa12.18□□□□□ -0.46
COL4A1-205ENST00000615732 CEP131Q9UPN4 1083 aa12.18□□□□□ -0.46
COL4A1-205ENST00000615732 PRRC2BQ5JSZ5 2229 aaKnown RBP12.18□□□□□ -0.46
COL4A1-205ENST00000615732 A0A1W2PQ27 194 aa12.17□□□□□ -0.46
COL4A1-205ENST00000615732 A0A1W2PQ64 194 aa12.17□□□□□ -0.46
COL4A1-205ENST00000615732 A0A1W2PQD8 194 aa12.17□□□□□ -0.46
COL4A1-205ENST00000615732 PALM3A6NDB9 673 aaPredicted RBP12.17□□□□□ -0.46
COL4A1-205ENST00000615732 KLRF2D3W0D1 207 aa12.17□□□□□ -0.46
COL4A1-205ENST00000615732 KINO60870 393 aaKnown RBP12.17□□□□□ -0.46
COL4A1-205ENST00000615732 MMP3P08254 477 aa12.17□□□□□ -0.46
COL4A1-205ENST00000615732 ZNF286BP0CG31 522 aa12.17□□□□□ -0.46
COL4A1-205ENST00000615732 POU3F3P20264 500 aaPredicted RBP12.17□□□□□ -0.46
COL4A1-205ENST00000615732 RFC2P35250 354 aa12.17□□□□□ -0.46
COL4A1-205ENST00000615732 GDF6Q6KF10 455 aaPredicted RBP12.17□□□□□ -0.46
COL4A1-205ENST00000615732 CCDC62Q6P9F0 684 aa12.17□□□□□ -0.46
COL4A1-205ENST00000615732 TMCO2Q7Z6W1 182 aaPredicted RBP12.17□□□□□ -0.46
COL4A1-205ENST00000615732 FBXO11Q86XK2 927 aa12.17□□□□□ -0.46
COL4A1-205ENST00000615732 RETREG2Q8NC44 543 aa12.17□□□□□ -0.46
COL4A1-205ENST00000615732 RRP36Q96EU6 259 aaKnown RBP12.17□□□□□ -0.46
COL4A1-205ENST00000615732 CTAGE1Q96RT6 745 aa12.17□□□□□ -0.46
COL4A1-205ENST00000615732 SLC9A7Q96T83 725 aa12.17□□□□□ -0.46
COL4A1-205ENST00000615732 RMDN3Q96TC7 470 aa12.17□□□□□ -0.46
COL4A1-205ENST00000615732 SPZ1Q9BXG8 430 aa12.17□□□□□ -0.46
COL4A1-205ENST00000615732 CLSTN2Q9H4D0 955 aa12.17□□□□□ -0.46
COL4A1-205ENST00000615732 JMJD4Q9H9V9 463 aa12.17□□□□□ -0.46
COL4A1-205ENST00000615732 SH3GLB2Q9NR46 395 aa12.17□□□□□ -0.46
COL4A1-205ENST00000615732 PCDHA7Q9UN72 937 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms