RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 RANBP17Q9H2T7 1088 aaKnown RBP14.47□□□□□ -0.09
FOXN3-219ENST00000615335 ETAA1Q9NY74 926 aa14.47□□□□□ -0.09
FOXN3-219ENST00000615335 PPP1R9AQ9ULJ8 1098 aa14.47□□□□□ -0.09
FOXN3-219ENST00000615335 CTDP1Q9Y5B0 961 aaPredicted RBP14.47□□□□□ -0.09
FOXN3-219ENST00000615335 SMCO2A6NFE2 343 aa14.47□□□□□ -0.09
FOXN3-219ENST00000615335 ACTN4O43707 911 aaKnown RBP14.47□□□□□ -0.09
FOXN3-219ENST00000615335 AARSP49588 968 aaKnown RBP eCLIP14.47□□□□□ -0.09
FOXN3-219ENST00000615335 WLSQ5T9L3 541 aa14.47□□□□□ -0.09
FOXN3-219ENST00000615335 SPECC1LQ69YQ0 1117 aa14.47□□□□□ -0.09
FOXN3-219ENST00000615335 FASTKD5Q7L8L6 764 aaKnown RBP14.47□□□□□ -0.09
FOXN3-219ENST00000615335 SAPCD2Q86UD0 394 aa14.47□□□□□ -0.09
FOXN3-219ENST00000615335 SPATS2Q86XZ4 545 aaKnown RBP14.47□□□□□ -0.09
FOXN3-219ENST00000615335 TRMT44Q8IYL2 757 aaKnown RBP14.47□□□□□ -0.09
FOXN3-219ENST00000615335 ODF2LQ9ULJ1 636 aa14.47□□□□□ -0.09
FOXN3-219ENST00000615335 VWA3AA6NCI4 1184 aa14.46□□□□□ -0.09
FOXN3-219ENST00000615335 ZNF157P51786 506 aaPredicted RBP14.46□□□□□ -0.09
FOXN3-219ENST00000615335 INHBEP58166 350 aa14.46□□□□□ -0.09
FOXN3-219ENST00000615335 GNG11P61952 73 aa14.46□□□□□ -0.09
FOXN3-219ENST00000615335 GRIK3Q13003 919 aa14.46□□□□□ -0.09
FOXN3-219ENST00000615335 ZMYND12Q9H0C1 365 aa14.46□□□□□ -0.09
FOXN3-219ENST00000615335 C6orf50Q9HD87 102 aa14.46□□□□□ -0.09
FOXN3-219ENST00000615335 PCDHA4Q9UN74 947 aa14.46□□□□□ -0.09
FOXN3-219ENST00000615335 STX10O60499 249 aa14.46□□□□□ -0.09
FOXN3-219ENST00000615335 PAX7P23759 505 aa14.46□□□□□ -0.09
FOXN3-219ENST00000615335 GNA11P29992 359 aa14.46□□□□□ -0.09
FOXN3-219ENST00000615335 USP49Q70CQ1 688 aa14.46□□□□□ -0.09
FOXN3-219ENST00000615335 CPXCR1Q8N123 301 aa14.46□□□□□ -0.09
FOXN3-219ENST00000615335 ATG4CQ96DT6 458 aa14.46□□□□□ -0.09
FOXN3-219ENST00000615335 PLEKHA4Q9H4M7 779 aa14.46□□□□□ -0.09
FOXN3-219ENST00000615335 ANKZF1Q9H8Y5 726 aa14.46□□□□□ -0.09
FOXN3-219ENST00000615335 HOXC10Q9NYD6 342 aa14.46□□□□□ -0.09
FOXN3-219ENST00000615335 SMCHD1A6NHR9 2005 aa14.46□□□□□ -0.1
FOXN3-219ENST00000615335 ZBED4O75132 1171 aa14.45□□□□□ -0.1
FOXN3-219ENST00000615335 RNF40O75150 1001 aa14.45□□□□□ -0.1
FOXN3-219ENST00000615335 FSBPO95073 299 aa14.45□□□□□ -0.1
FOXN3-219ENST00000615335 ERCC5P28715 1186 aaPredicted RBP14.45□□□□□ -0.1
FOXN3-219ENST00000615335 DSG3P32926 999 aa14.45□□□□□ -0.1
FOXN3-219ENST00000615335 NPY5RQ15761 445 aa14.45□□□□□ -0.1
FOXN3-219ENST00000615335 SPRYD7Q5W111 196 aa14.45□□□□□ -0.1
FOXN3-219ENST00000615335 BLIDQ8IZY5 108 aa14.45□□□□□ -0.1
FOXN3-219ENST00000615335 OTUD6BQ8N6M0 293 aa14.45□□□□□ -0.1
FOXN3-219ENST00000615335 TC2NQ8N9U0 490 aa14.45□□□□□ -0.1
FOXN3-219ENST00000615335 SPATS2LQ9NUQ6 558 aaKnown RBP14.45□□□□□ -0.1
FOXN3-219ENST00000615335 ABT1Q9ULW3 272 aaKnown RBP14.45□□□□□ -0.1
FOXN3-219ENST00000615335 AGTPBP1Q9UPW5 1226 aa14.45□□□□□ -0.1
FOXN3-219ENST00000615335 PARP14Q460N5 1801 aa14.45□□□□□ -0.1
FOXN3-219ENST00000615335 LOC285556D6RIA3 1793 aa14.45□□□□□ -0.1
FOXN3-219ENST00000615335 VWA5AO00534 786 aa14.45□□□□□ -0.1
FOXN3-219ENST00000615335 IPO7O95373 1038 aaKnown RBP14.45□□□□□ -0.1
FOXN3-219ENST00000615335 ZBTB48P10074 688 aaPredicted RBP14.45□□□□□ -0.1
FOXN3-219ENST00000615335 TAL1P17542 331 aaPredicted RBP14.45□□□□□ -0.1
FOXN3-219ENST00000615335 GTF2A2P52657 109 aa14.45□□□□□ -0.1
FOXN3-219ENST00000615335 ADKP55263 362 aaKnown RBP14.45□□□□□ -0.1
FOXN3-219ENST00000615335 TRAF1Q13077 416 aa14.45□□□□□ -0.1
FOXN3-219ENST00000615335 TTC19Q6DKK2 380 aaPredicted RBP14.45□□□□□ -0.1
FOXN3-219ENST00000615335 GALNT17Q6IS24 598 aa14.45□□□□□ -0.1
FOXN3-219ENST00000615335 PPP1R18Q6NYC8 613 aa14.45□□□□□ -0.1
FOXN3-219ENST00000615335 FAM177A1Q8N128 213 aaPredicted RBP14.45□□□□□ -0.1
FOXN3-219ENST00000615335 ARMC2Q8NEN0 867 aa14.45□□□□□ -0.1
FOXN3-219ENST00000615335 SPATA20Q8TB22 786 aa14.45□□□□□ -0.1
FOXN3-219ENST00000615335 TATDN2Q93075 761 aa14.45□□□□□ -0.1
FOXN3-219ENST00000615335 DHX58Q96C10 678 aa14.45□□□□□ -0.1
FOXN3-219ENST00000615335 SLC38A10Q9HBR0 1119 aa14.45□□□□□ -0.1
FOXN3-219ENST00000615335 ABCB6Q9NP58 842 aa14.45□□□□□ -0.1
FOXN3-219ENST00000615335 SAMSN1Q9NSI8 373 aaKnown RBP14.45□□□□□ -0.1
FOXN3-219ENST00000615335 CETPP11597 493 aa14.44□□□□□ -0.1
FOXN3-219ENST00000615335 HOXA7P31268 230 aaPredicted RBP14.44□□□□□ -0.1
FOXN3-219ENST00000615335 ADCY7P51828 1080 aa14.44□□□□□ -0.1
FOXN3-219ENST00000615335 MOGSQ13724 837 aa14.44□□□□□ -0.1
FOXN3-219ENST00000615335 PSTPIP2Q9H939 334 aa14.44□□□□□ -0.1
FOXN3-219ENST00000615335 SLC24A3Q9HC58 644 aa14.44□□□□□ -0.1
FOXN3-219ENST00000615335 RAVER2Q9HCJ3 691 aaKnown RBP14.44□□□□□ -0.1
FOXN3-219ENST00000615335 RLFQ13129 1914 aa14.44□□□□□ -0.1
FOXN3-219ENST00000615335 CCL15-CCL14A0A0B4J2E2 113 aa14.44□□□□□ -0.1
FOXN3-219ENST00000615335 TMEM88BA6NKF7 163 aa14.44□□□□□ -0.1
FOXN3-219ENST00000615335 ADAMTS3O15072 1205 aa14.44□□□□□ -0.1
FOXN3-219ENST00000615335 ICAM1P05362 532 aa14.44□□□□□ -0.1
FOXN3-219ENST00000615335 FDX1P10109 184 aa14.44□□□□□ -0.1
FOXN3-219ENST00000615335 CCT5P48643 541 aa14.44□□□□□ -0.1
FOXN3-219ENST00000615335 CCL15Q16663 113 aa14.44□□□□□ -0.1
FOXN3-219ENST00000615335 RGMBQ6NW40 437 aa14.44□□□□□ -0.1
FOXN3-219ENST00000615335 RASGRP4Q8TDF6 673 aa14.44□□□□□ -0.1
FOXN3-219ENST00000615335 MS4A4AQ96JQ5 239 aa14.44□□□□□ -0.1
FOXN3-219ENST00000615335 AGBL1Q96MI9 1066 aa14.44□□□□□ -0.1
FOXN3-219ENST00000615335 MED15Q96RN5 788 aa14.44□□□□□ -0.1
FOXN3-219ENST00000615335 CCPG1Q9ULG6 757 aa14.44□□□□□ -0.1
FOXN3-219ENST00000615335 ZNF536O15090 1300 aa14.43□□□□□ -0.1
FOXN3-219ENST00000615335 ESYT2A0FGR8 921 aa14.43□□□□□ -0.1
FOXN3-219ENST00000615335 FAM205CA6NFA0 338 aa14.43□□□□□ -0.1
FOXN3-219ENST00000615335 SPDYE16A6NNV3 312 aaPredicted RBP14.43□□□□□ -0.1
FOXN3-219ENST00000615335 TBC1D8BQ0IIM8 1120 aa14.43□□□□□ -0.1
FOXN3-219ENST00000615335 FSTL1Q12841 308 aa14.43□□□□□ -0.1
FOXN3-219ENST00000615335 PABPC4Q13310 644 aaKnown RBP eCLIP14.43□□□□□ -0.1
FOXN3-219ENST00000615335 NR1I3Q14994 352 aa14.43□□□□□ -0.1
FOXN3-219ENST00000615335 B4GALNT4Q76KP1 1039 aa14.43□□□□□ -0.1
FOXN3-219ENST00000615335 CUL5Q93034 780 aa14.43□□□□□ -0.1
FOXN3-219ENST00000615335 NUCKS1Q9H1E3 243 aaKnown RBP14.43□□□□□ -0.1
FOXN3-219ENST00000615335 TLL2Q9Y6L7 1015 aa14.43□□□□□ -0.1
FOXN3-219ENST00000615335 CAPN7Q9Y6W3 813 aa14.43□□□□□ -0.1
FOXN3-219ENST00000615335 RTN2O75298 545 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms