RNA–Protein interactions for RNA: ENST00000611910.4

SYNRG-216, Transcript of synergin gamma, humanhuman

TSL 1 (best)

Gene SYNRG, Length 1,769 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-216ENST00000611910 ERCC3P19447 782 aa11.25□□□□□ -0.61
SYNRG-216ENST00000611910 AARSP49588 968 aaKnown RBP eCLIP11.25□□□□□ -0.61
SYNRG-216ENST00000611910 SLC12A3P55017 1021 aa11.25□□□□□ -0.61
SYNRG-216ENST00000611910 HNRNPH2P55795 449 aaKnown RBP11.25□□□□□ -0.61
SYNRG-216ENST00000611910 POLR2FP61218 127 aaKnown RBP11.25□□□□□ -0.61
SYNRG-216ENST00000611910 ICA1Q05084 483 aa11.25□□□□□ -0.61
SYNRG-216ENST00000611910 ASTE1Q2TB18 679 aaPredicted RBP11.25□□□□□ -0.61
SYNRG-216ENST00000611910 STRIP1Q5VSL9 837 aa11.25□□□□□ -0.61
SYNRG-216ENST00000611910 GOLGA5Q8TBA6 731 aa11.25□□□□□ -0.61
SYNRG-216ENST00000611910 COG1Q8WTW3 980 aa11.25□□□□□ -0.61
SYNRG-216ENST00000611910 FAM20AQ96MK3 541 aa11.25□□□□□ -0.61
SYNRG-216ENST00000611910 PCDHA2Q9Y5H9 948 aa11.25□□□□□ -0.61
SYNRG-216ENST00000611910 ADAMTSL1Q8N6G6 1762 aa11.25□□□□□ -0.61
SYNRG-216ENST00000611910 ATAD5Q96QE3 1844 aa11.25□□□□□ -0.61
SYNRG-216ENST00000611910 NPHP3-ACAD11A0A0J9YXS1 232 aa11.24□□□□□ -0.61
SYNRG-216ENST00000611910 FRMD3A2A2Y4 597 aa11.24□□□□□ -0.61
SYNRG-216ENST00000611910 F5H6K3 240 aa11.24□□□□□ -0.61
SYNRG-216ENST00000611910 PDE2AO00408 941 aaPredicted RBP11.24□□□□□ -0.61
SYNRG-216ENST00000611910 MEIS2O14770 477 aa11.24□□□□□ -0.61
SYNRG-216ENST00000611910 MED24O75448 989 aa11.24□□□□□ -0.61
SYNRG-216ENST00000611910 RPA1P27694 616 aa11.24□□□□□ -0.61
SYNRG-216ENST00000611910 ZNF76P36508 570 aa11.24□□□□□ -0.61
SYNRG-216ENST00000611910 GYS2P54840 703 aa11.24□□□□□ -0.61
SYNRG-216ENST00000611910 KLRC3Q07444 240 aa11.24□□□□□ -0.61
SYNRG-216ENST00000611910 RAPGEF1Q13905 1077 aa11.24□□□□□ -0.61
SYNRG-216ENST00000611910 ASIC2Q16515 512 aa11.24□□□□□ -0.61
SYNRG-216ENST00000611910 ABCB5Q2M3G0 1257 aa11.24□□□□□ -0.61
SYNRG-216ENST00000611910 CFAP221Q4G0U5 840 aa11.24□□□□□ -0.61
SYNRG-216ENST00000611910 PRR16Q569H4 304 aa11.24□□□□□ -0.61
SYNRG-216ENST00000611910 C10orf76Q5T2E6 689 aa11.24□□□□□ -0.61
SYNRG-216ENST00000611910 HGSNATQ68CP4 663 aa11.24□□□□□ -0.61
SYNRG-216ENST00000611910 TATDN1Q6P1N9 297 aa11.24□□□□□ -0.61
SYNRG-216ENST00000611910 KIAA0825Q8IV33 1275 aa11.24□□□□□ -0.61
SYNRG-216ENST00000611910 ZFPM1Q8IX07 1006 aa11.24□□□□□ -0.61
SYNRG-216ENST00000611910 KCTD17Q8N5Z5 321 aa11.24□□□□□ -0.61
SYNRG-216ENST00000611910 SYT2Q8N9I0 419 aaPredicted RBP11.24□□□□□ -0.61
SYNRG-216ENST00000611910 GMCL1P1Q8NEA9 526 aa11.24□□□□□ -0.61
SYNRG-216ENST00000611910 SPATA4Q8NEY3 305 aa11.24□□□□□ -0.61
SYNRG-216ENST00000611910 SCFD1Q8WVM8 642 aa11.24□□□□□ -0.61
SYNRG-216ENST00000611910 GMCL1Q96IK5 515 aa11.24□□□□□ -0.61
SYNRG-216ENST00000611910 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.24□□□□□ -0.61
SYNRG-216ENST00000611910 KCTD10Q9H3F6 313 aa11.24□□□□□ -0.61
SYNRG-216ENST00000611910 MYH10P35580 1976 aa11.24□□□□□ -0.61
SYNRG-216ENST00000611910 DDTLA6NHG4 134 aaPredicted RBP11.23□□□□□ -0.61
SYNRG-216ENST00000611910 N4BP1O75113 896 aaKnown RBP11.23□□□□□ -0.61
SYNRG-216ENST00000611910 NR2F2P24468 414 aa11.23□□□□□ -0.61
SYNRG-216ENST00000611910 RPL13P26373 211 aaKnown RBP11.23□□□□□ -0.61
SYNRG-216ENST00000611910 ACTN2P35609 894 aa11.23□□□□□ -0.61
SYNRG-216ENST00000611910 STAT3P40763 770 aa11.23□□□□□ -0.61
SYNRG-216ENST00000611910 CACNB1Q02641 598 aaPredicted RBP11.23□□□□□ -0.61
SYNRG-216ENST00000611910 RAD51AP2Q09MP3 1159 aa11.23□□□□□ -0.61
SYNRG-216ENST00000611910 KLHL30Q0D2K2 578 aa11.23□□□□□ -0.61
SYNRG-216ENST00000611910 KCNH2Q12809 1159 aa11.23□□□□□ -0.61
SYNRG-216ENST00000611910 ZSCAN26Q16670 478 aa11.23□□□□□ -0.61
SYNRG-216ENST00000611910 KNOP1Q1ED39 458 aaKnown RBP11.23□□□□□ -0.61
SYNRG-216ENST00000611910 GLE1Q53GS7 698 aaKnown RBP11.23□□□□□ -0.61
SYNRG-216ENST00000611910 MUM1L1Q5H9M0 696 aa11.23□□□□□ -0.61
SYNRG-216ENST00000611910 SYDE2Q5VT97 1194 aa11.23□□□□□ -0.61
SYNRG-216ENST00000611910 SAMD1Q6SPF0 538 aaPredicted RBP11.23□□□□□ -0.61
SYNRG-216ENST00000611910 KRT27Q7Z3Y8 459 aa11.23□□□□□ -0.61
SYNRG-216ENST00000611910 FRMD5Q7Z6J6 570 aa11.23□□□□□ -0.61
SYNRG-216ENST00000611910 CATSPER3Q86XQ3 398 aa11.23□□□□□ -0.61
SYNRG-216ENST00000611910 ZC3H3Q8IXZ2 948 aaKnown RBP11.23□□□□□ -0.61
SYNRG-216ENST00000611910 FLAD1Q8NFF5 587 aa11.23□□□□□ -0.61
SYNRG-216ENST00000611910 ZNF622Q969S3 477 aaKnown RBP eCLIP11.23□□□□□ -0.61
SYNRG-216ENST00000611910 DNAJC18Q9H819 358 aa11.23□□□□□ -0.61
SYNRG-216ENST00000611910 DBNDD1Q9H9R9 158 aa11.23□□□□□ -0.61
SYNRG-216ENST00000611910 ARMCX3Q9UH62 379 aaPredicted RBP11.23□□□□□ -0.61
SYNRG-216ENST00000611910 HPCAL4Q9UM19 191 aa11.23□□□□□ -0.61
SYNRG-216ENST00000611910 NRXN2Q9P2S2 1712 aa11.23□□□□□ -0.61
SYNRG-216ENST00000611910 POTEFA5A3E0 1075 aa11.23□□□□□ -0.61
SYNRG-216ENST00000611910 BUB1O43683 1085 aa11.23□□□□□ -0.61
SYNRG-216ENST00000611910 NOL4O94818 638 aa11.23□□□□□ -0.61
SYNRG-216ENST00000611910 IVLP07476 585 aa11.23□□□□□ -0.61
SYNRG-216ENST00000611910 POTEIP0CG38 1075 aa11.23□□□□□ -0.61
SYNRG-216ENST00000611910 BMP3P12645 472 aa11.23□□□□□ -0.61
SYNRG-216ENST00000611910 CAPN2P17655 700 aa11.23□□□□□ -0.61
SYNRG-216ENST00000611910 SREBF1P36956 1147 aa11.23□□□□□ -0.61
SYNRG-216ENST00000611910 MATR3P43243 847 aaKnown RBP eCLIP11.23□□□□□ -0.61
SYNRG-216ENST00000611910 CACNB3P54284 484 aa11.23□□□□□ -0.61
SYNRG-216ENST00000611910 GIT2Q14161 759 aa11.23□□□□□ -0.61
SYNRG-216ENST00000611910 SLC18A3Q16572 532 aa11.23□□□□□ -0.61
SYNRG-216ENST00000611910 IFI16Q16666 785 aaKnown RBP11.23□□□□□ -0.61
SYNRG-216ENST00000611910 USH1GQ495M9 461 aa11.23□□□□□ -0.61
SYNRG-216ENST00000611910 ARSHQ5FYA8 562 aa11.23□□□□□ -0.61
SYNRG-216ENST00000611910 RBM26Q5T8P6 1007 aaKnown RBP11.23□□□□□ -0.61
SYNRG-216ENST00000611910 NFRKBQ6P4R8 1299 aa11.23□□□□□ -0.61
SYNRG-216ENST00000611910 POTEGQ6S5H5 508 aa11.23□□□□□ -0.61
SYNRG-216ENST00000611910 POTEEQ6S8J3 1075 aa11.23□□□□□ -0.61
SYNRG-216ENST00000611910 ANKRD13CQ8N6S4 541 aa11.23□□□□□ -0.61
SYNRG-216ENST00000611910 ETNPPLQ8TBG4 499 aa11.23□□□□□ -0.61
SYNRG-216ENST00000611910 AFAP1L1Q8TED9 768 aa11.23□□□□□ -0.61
SYNRG-216ENST00000611910 TBC1D5Q92609 795 aa11.23□□□□□ -0.61
SYNRG-216ENST00000611910 UIMC1Q96RL1 719 aa11.23□□□□□ -0.61
SYNRG-216ENST00000611910 SELENOOQ9BVL4 669 aa11.23□□□□□ -0.61
SYNRG-216ENST00000611910 QTRT2Q9H974 415 aaKnown RBP11.23□□□□□ -0.61
SYNRG-216ENST00000611910 METTL14Q9HCE5 456 aaKnown RBP11.23□□□□□ -0.61
SYNRG-216ENST00000611910 AIPL1Q9NZN9 384 aa11.23□□□□□ -0.61
SYNRG-216ENST00000611910 SERPINA10Q9UK55 444 aa11.23□□□□□ -0.61
SYNRG-216ENST00000611910 HDAC9Q9UKV0 1011 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms