RNA–Protein interactions for RNA: ENST00000606878.1

LINC00240-203, long intergenic non-protein coding RNA 240, humanhuman

TSL 1 (best)

Gene LINC00240, Length 927 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00240-203ENST00000606878 RNPC3Q96LT9 517 aaKnown RBP18.82■□□□□ 0.6
LINC00240-203ENST00000606878 ZNF577Q9BSK1 485 aa18.82■□□□□ 0.6
LINC00240-203ENST00000606878 PHF20Q9BVI0 1012 aa18.82■□□□□ 0.6
LINC00240-203ENST00000606878 WNT8AQ9H1J5 351 aa18.82■□□□□ 0.6
LINC00240-203ENST00000606878 RNPEPQ9H4A4 650 aa18.82■□□□□ 0.6
LINC00240-203ENST00000606878 AZI2Q9H6S1 392 aa18.82■□□□□ 0.6
LINC00240-203ENST00000606878 TBC1D22BQ9NU19 505 aa18.82■□□□□ 0.6
LINC00240-203ENST00000606878 IPO5O00410 1097 aaKnown RBP18.81■□□□□ 0.6
LINC00240-203ENST00000606878 SOX1O00570 391 aaPredicted RBP18.81■□□□□ 0.6
LINC00240-203ENST00000606878 DTNBO60941 627 aa18.81■□□□□ 0.6
LINC00240-203ENST00000606878 IQCF3P0C7M6 154 aa18.81■□□□□ 0.6
LINC00240-203ENST00000606878 SMIM10L2AP0DMW4 78 aa18.81■□□□□ 0.6
LINC00240-203ENST00000606878 SMIM10L2BP0DMW5 78 aa18.81■□□□□ 0.6
LINC00240-203ENST00000606878 FDPSP14324 419 aaKnown RBP18.81■□□□□ 0.6
LINC00240-203ENST00000606878 ACTR2P61160 394 aa18.81■□□□□ 0.6
LINC00240-203ENST00000606878 ZNF200P98182 395 aaPredicted RBP18.81■□□□□ 0.6
LINC00240-203ENST00000606878 ITGB3BPQ13352 177 aaPredicted RBP18.81■□□□□ 0.6
LINC00240-203ENST00000606878 RABEP1Q15276 862 aa18.81■□□□□ 0.6
LINC00240-203ENST00000606878 TMEM240Q5SV17 173 aa18.81■□□□□ 0.6
LINC00240-203ENST00000606878 PSRC1Q6PGN9 363 aaPredicted RBP18.81■□□□□ 0.6
LINC00240-203ENST00000606878 KRT25Q7Z3Z0 450 aa18.81■□□□□ 0.6
LINC00240-203ENST00000606878 TRIM50Q86XT4 487 aa18.81■□□□□ 0.6
LINC00240-203ENST00000606878 NSUN7Q8NE18 718 aaKnown RBP18.81■□□□□ 0.6
LINC00240-203ENST00000606878 TBCKQ8TEA7 893 aa18.81■□□□□ 0.6
LINC00240-203ENST00000606878 ATP6V0A1Q93050 837 aa18.81■□□□□ 0.6
LINC00240-203ENST00000606878 SCLYQ96I15 445 aa18.81■□□□□ 0.6
LINC00240-203ENST00000606878 CTAGE1Q96RT6 745 aa18.81■□□□□ 0.6
LINC00240-203ENST00000606878 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.81■□□□□ 0.6
LINC00240-203ENST00000606878 ERAP1Q9NZ08 941 aa18.81■□□□□ 0.6
LINC00240-203ENST00000606878 M0R2N6 131 aa18.8■□□□□ 0.6
LINC00240-203ENST00000606878 RFC2P35250 354 aa18.8■□□□□ 0.6
LINC00240-203ENST00000606878 NONOQ15233 471 aaKnown RBP eCLIP18.8■□□□□ 0.6
LINC00240-203ENST00000606878 NPY5RQ15761 445 aa18.8■□□□□ 0.6
LINC00240-203ENST00000606878 AFAP1L1Q8TED9 768 aa18.8■□□□□ 0.6
LINC00240-203ENST00000606878 TNPO1Q92973 898 aaKnown RBP18.8■□□□□ 0.6
LINC00240-203ENST00000606878 LRCH3Q96II8 777 aa18.8■□□□□ 0.6
LINC00240-203ENST00000606878 SETD4Q9NVD3 440 aa18.8■□□□□ 0.6
LINC00240-203ENST00000606878 CCDC194A0A1B0GVG4 234 aa18.79■□□□□ 0.6
LINC00240-203ENST00000606878 DDX39AO00148 427 aaKnown RBP18.79■□□□□ 0.6
LINC00240-203ENST00000606878 DHX15O43143 795 aaKnown RBP18.79■□□□□ 0.6
LINC00240-203ENST00000606878 LGR5O75473 907 aa18.79■□□□□ 0.6
LINC00240-203ENST00000606878 ATG7O95352 703 aa18.79■□□□□ 0.6
LINC00240-203ENST00000606878 PFKMP08237 780 aa18.79■□□□□ 0.6
LINC00240-203ENST00000606878 SELPP16109 830 aa18.79■□□□□ 0.6
LINC00240-203ENST00000606878 STAT5BP51692 787 aa18.79■□□□□ 0.6
LINC00240-203ENST00000606878 HIC1Q14526 733 aa18.79■□□□□ 0.6
LINC00240-203ENST00000606878 GPR153Q6NV75 609 aa18.79■□□□□ 0.6
LINC00240-203ENST00000606878 UIMC1Q96RL1 719 aa18.79■□□□□ 0.6
LINC00240-203ENST00000606878 LLPHQ9BRT6 129 aaKnown RBP18.79■□□□□ 0.6
LINC00240-203ENST00000606878 MTIF3Q9H2K0 278 aaKnown RBP18.79■□□□□ 0.6
LINC00240-203ENST00000606878 SH2B1Q9NRF2 756 aaPredicted RBP18.79■□□□□ 0.6
LINC00240-203ENST00000606878 GJB4Q9NTQ9 266 aa18.79■□□□□ 0.6
LINC00240-203ENST00000606878 TCEAL9Q9UHQ7 104 aa18.79■□□□□ 0.6
LINC00240-203ENST00000606878 NRCAMQ92823 1304 aa18.78■□□□□ 0.6
LINC00240-203ENST00000606878 CYP3A7-CYP3A51PA0A087WV96 503 aa18.78■□□□□ 0.6
LINC00240-203ENST00000606878 EDIL3O43854 480 aa18.78■□□□□ 0.6
LINC00240-203ENST00000606878 ST18O60284 1047 aa18.78■□□□□ 0.6
LINC00240-203ENST00000606878 JAK2O60674 1132 aa18.78■□□□□ 0.6
LINC00240-203ENST00000606878 PARNO95453 639 aaKnown RBP18.78■□□□□ 0.6
LINC00240-203ENST00000606878 CYP3A7P24462 503 aa18.78■□□□□ 0.6
LINC00240-203ENST00000606878 TRIM29Q14134 588 aa18.78■□□□□ 0.6
LINC00240-203ENST00000606878 MIS18BP1Q6P0N0 1132 aa18.78■□□□□ 0.6
LINC00240-203ENST00000606878 PLPPR4Q7Z2D5 763 aa18.78■□□□□ 0.6
LINC00240-203ENST00000606878 DEFB128Q7Z7B8 93 aa18.78■□□□□ 0.6
LINC00240-203ENST00000606878 SERINC5Q86VE9 423 aa18.78■□□□□ 0.6
LINC00240-203ENST00000606878 HERVK_113Q902F9 699 aa18.78■□□□□ 0.6
LINC00240-203ENST00000606878 BRMS1Q9HCU9 246 aa18.78■□□□□ 0.6
LINC00240-203ENST00000606878 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.77■□□□□ 0.6
LINC00240-203ENST00000606878 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.77■□□□□ 0.6
LINC00240-203ENST00000606878 BACH1O14867 736 aa18.77■□□□□ 0.6
LINC00240-203ENST00000606878 TREHO43280 583 aa18.77■□□□□ 0.6
LINC00240-203ENST00000606878 CCNE2O96020 404 aa18.77■□□□□ 0.6
LINC00240-203ENST00000606878 CKBP12277 381 aa18.77■□□□□ 0.6
LINC00240-203ENST00000606878 MARK3P27448 753 aa18.77■□□□□ 0.6
LINC00240-203ENST00000606878 HOXC8P31273 242 aa18.77■□□□□ 0.6
LINC00240-203ENST00000606878 RBL2Q08999 1139 aa18.77■□□□□ 0.6
LINC00240-203ENST00000606878 INF2Q27J81 1249 aa18.77■□□□□ 0.6
LINC00240-203ENST00000606878 Q4G0T1 1027 aa18.77■□□□□ 0.6
LINC00240-203ENST00000606878 FAM160B1Q5W0V3 765 aa18.77■□□□□ 0.6
LINC00240-203ENST00000606878 ZNF746Q6NUN9 644 aaPredicted RBP18.77■□□□□ 0.6
LINC00240-203ENST00000606878 ABHD15Q6UXT9 468 aa18.77■□□□□ 0.6
LINC00240-203ENST00000606878 LRRC8DQ7L1W4 858 aa18.77■□□□□ 0.6
LINC00240-203ENST00000606878 CCDC83Q8IWF9 413 aa18.77■□□□□ 0.6
LINC00240-203ENST00000606878 DHX38Q92620 1227 aaKnown RBP18.77■□□□□ 0.6
LINC00240-203ENST00000606878 PCYT2Q99447 389 aa18.77■□□□□ 0.6
LINC00240-203ENST00000606878 FTOQ9C0B1 505 aaKnown RBP eCLIP18.77■□□□□ 0.6
LINC00240-203ENST00000606878 GTF3C3Q9Y5Q9 886 aa18.77■□□□□ 0.6
LINC00240-203ENST00000606878 LTBP2Q14767 1821 aa18.77■□□□□ 0.59
LINC00240-203ENST00000606878 EMSYQ7Z589 1322 aa18.76■□□□□ 0.59
LINC00240-203ENST00000606878 RRN3P2A6NIE6 340 aa18.76■□□□□ 0.59
LINC00240-203ENST00000606878 MSH4O15457 936 aa18.76■□□□□ 0.59
LINC00240-203ENST00000606878 ACTN1P12814 892 aa18.76■□□□□ 0.59
LINC00240-203ENST00000606878 KRT2P35908 639 aa18.76■□□□□ 0.59
LINC00240-203ENST00000606878 THPOP40225 353 aa18.76■□□□□ 0.59
LINC00240-203ENST00000606878 SLC26A2P50443 739 aa18.76■□□□□ 0.59
LINC00240-203ENST00000606878 SMAD3P84022 425 aaKnown RBP18.76■□□□□ 0.59
LINC00240-203ENST00000606878 KRT76Q01546 638 aa18.76■□□□□ 0.59
LINC00240-203ENST00000606878 PPFIA1Q13136 1202 aa18.76■□□□□ 0.59
LINC00240-203ENST00000606878 MOXD1Q6UVY6 613 aa18.76■□□□□ 0.59
LINC00240-203ENST00000606878 OTOP2Q7RTS6 562 aa18.76■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms