RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 ZNF18P17022 549 aa24.07■■□□□ 1.44
USP6NL-204ENST00000606752 PPP1R2P41236 205 aa24.07■■□□□ 1.44
USP6NL-204ENST00000606752 FANCCQ00597 558 aa24.07■■□□□ 1.44
USP6NL-204ENST00000606752 STK4Q13043 487 aa24.07■■□□□ 1.44
USP6NL-204ENST00000606752 MKRN3Q13064 507 aaKnown RBP24.07■■□□□ 1.44
USP6NL-204ENST00000606752 NELFBQ8WX92 580 aa24.07■■□□□ 1.44
USP6NL-204ENST00000606752 BTBD19C9JJ37 291 aa24.06■■□□□ 1.44
USP6NL-204ENST00000606752 POTEB2H3BUK9 544 aa24.06■■□□□ 1.44
USP6NL-204ENST00000606752 PDHXO00330 501 aa24.06■■□□□ 1.44
USP6NL-204ENST00000606752 ATP9AO75110 1047 aa24.06■■□□□ 1.44
USP6NL-204ENST00000606752 PSMD2Q13200 908 aa24.06■■□□□ 1.44
USP6NL-204ENST00000606752 COBLL1Q53SF7 1204 aa24.06■■□□□ 1.44
USP6NL-204ENST00000606752 BRI3BPQ8WY22 251 aa24.06■■□□□ 1.44
USP6NL-204ENST00000606752 CDHR1Q96JP9 859 aa24.06■■□□□ 1.44
USP6NL-204ENST00000606752 PSMA7O14818 248 aa24.05■■□□□ 1.44
USP6NL-204ENST00000606752 RGS20O76081 388 aa24.05■■□□□ 1.44
USP6NL-204ENST00000606752 CYP2C8P10632 490 aa24.05■■□□□ 1.44
USP6NL-204ENST00000606752 STXBP2Q15833 593 aa24.05■■□□□ 1.44
USP6NL-204ENST00000606752 ANKRD23Q86SG2 305 aa24.05■■□□□ 1.44
USP6NL-204ENST00000606752 MROH8Q9H579 483 aa24.05■■□□□ 1.44
USP6NL-204ENST00000606752 ADD3Q9UEY8 706 aaKnown RBP24.05■■□□□ 1.44
USP6NL-204ENST00000606752 FCER1AP12319 257 aa24.05■■□□□ 1.44
USP6NL-204ENST00000606752 ALDH5A1P51649 535 aaPredicted RBP24.05■■□□□ 1.44
USP6NL-204ENST00000606752 ERVK-9P63128 1117 aa24.05■■□□□ 1.44
USP6NL-204ENST00000606752 ERVK-24P63145 666 aa24.05■■□□□ 1.44
USP6NL-204ENST00000606752 EHHADHQ08426 723 aa24.05■■□□□ 1.44
USP6NL-204ENST00000606752 GNPTABQ3T906 1256 aa24.05■■□□□ 1.44
USP6NL-204ENST00000606752 ARSHQ5FYA8 562 aa24.05■■□□□ 1.44
USP6NL-204ENST00000606752 DRC7Q8IY82 874 aa24.05■■□□□ 1.44
USP6NL-204ENST00000606752 SPC24Q8NBT2 197 aa24.05■■□□□ 1.44
USP6NL-204ENST00000606752 DHTKD1Q96HY7 919 aaPredicted RBP24.05■■□□□ 1.44
USP6NL-204ENST00000606752 NACC1Q96RE7 527 aa24.05■■□□□ 1.44
USP6NL-204ENST00000606752 BHMT2Q9H2M3 363 aa24.05■■□□□ 1.44
USP6NL-204ENST00000606752 SAMSN1Q9NSI8 373 aaKnown RBP24.05■■□□□ 1.44
USP6NL-204ENST00000606752 PANK4Q9NVE7 773 aa24.05■■□□□ 1.44
USP6NL-204ENST00000606752 IFNKQ9P0W0 207 aa24.05■■□□□ 1.44
USP6NL-204ENST00000606752 ASTN1O14525 1302 aa24.04■■□□□ 1.44
USP6NL-204ENST00000606752 GOLGA6L6A8MZA4 724 aa24.04■■□□□ 1.44
USP6NL-204ENST00000606752 EIF3JO75822 258 aaKnown RBP24.04■■□□□ 1.44
USP6NL-204ENST00000606752 P4HBP07237 508 aaKnown RBP24.04■■□□□ 1.44
USP6NL-204ENST00000606752 CDK11BP21127 795 aaKnown RBP24.04■■□□□ 1.44
USP6NL-204ENST00000606752 CCDC65Q8IXS2 484 aa24.04■■□□□ 1.44
USP6NL-204ENST00000606752 FAM133AQ8N9E0 248 aa24.04■■□□□ 1.44
USP6NL-204ENST00000606752 SHCBP1Q8NEM2 672 aa24.04■■□□□ 1.44
USP6NL-204ENST00000606752 SMCR8Q8TEV9 937 aaPredicted RBP24.04■■□□□ 1.44
USP6NL-204ENST00000606752 SERPINC1P01008 464 aa24.03■■□□□ 1.44
USP6NL-204ENST00000606752 KRT76Q01546 638 aa24.03■■□□□ 1.44
USP6NL-204ENST00000606752 TPD52L1Q16890 204 aaPredicted RBP24.03■■□□□ 1.44
USP6NL-204ENST00000606752 KIAA0895Q8NCT3 520 aa24.03■■□□□ 1.44
USP6NL-204ENST00000606752 PIGOQ8TEQ8 1089 aa24.03■■□□□ 1.44
USP6NL-204ENST00000606752 LXNQ9BS40 222 aa24.03■■□□□ 1.44
USP6NL-204ENST00000606752 XPO4Q9C0E2 1151 aaKnown RBP24.03■■□□□ 1.44
USP6NL-204ENST00000606752 R3HDMLQ9H3Y0 253 aa24.03■■□□□ 1.44
USP6NL-204ENST00000606752 SLC39A2Q9NP94 309 aa24.03■■□□□ 1.44
USP6NL-204ENST00000606752 TCEAL9Q9UHQ7 104 aa24.03■■□□□ 1.44
USP6NL-204ENST00000606752 SAMM50Q9Y512 469 aa24.03■■□□□ 1.44
USP6NL-204ENST00000606752 SOWAHBA6NEL2 793 aa24.03■■□□□ 1.44
USP6NL-204ENST00000606752 SPATA31C2B4DYI2 1134 aa24.03■■□□□ 1.44
USP6NL-204ENST00000606752 KRT18P05783 430 aaKnown RBP24.03■■□□□ 1.44
USP6NL-204ENST00000606752 SFNP31947 248 aa24.03■■□□□ 1.44
USP6NL-204ENST00000606752 JAK3P52333 1124 aa24.03■■□□□ 1.44
USP6NL-204ENST00000606752 HUNKP57058 714 aa24.03■■□□□ 1.44
USP6NL-204ENST00000606752 COASYQ13057 564 aa24.03■■□□□ 1.44
USP6NL-204ENST00000606752 HPS3Q969F9 1004 aa24.03■■□□□ 1.44
USP6NL-204ENST00000606752 WRAP73Q9P2S5 460 aaPredicted RBP24.03■■□□□ 1.44
USP6NL-204ENST00000606752 CBFA2T2O43439 604 aa24.02■■□□□ 1.44
USP6NL-204ENST00000606752 EDNRBP24530 442 aa24.02■■□□□ 1.44
USP6NL-204ENST00000606752 UBASH3AP57075 661 aa24.02■■□□□ 1.44
USP6NL-204ENST00000606752 BANK1Q8NDB2 785 aa24.02■■□□□ 1.44
USP6NL-204ENST00000606752 GPRC5AQ8NFJ5 357 aa24.02■■□□□ 1.44
USP6NL-204ENST00000606752 ZSWIM4Q9H7M6 989 aa24.02■■□□□ 1.44
USP6NL-204ENST00000606752 NPHP3-ACAD11A0A0J9YXS1 232 aa24.01■■□□□ 1.43
USP6NL-204ENST00000606752 FRMD3A2A2Y4 597 aa24.01■■□□□ 1.43
USP6NL-204ENST00000606752 B4DLN1 442 aa24.01■■□□□ 1.43
USP6NL-204ENST00000606752 KCNA2P16389 499 aa24.01■■□□□ 1.43
USP6NL-204ENST00000606752 GIT2Q14161 759 aa24.01■■□□□ 1.43
USP6NL-204ENST00000606752 KCTD2Q14681 263 aa24.01■■□□□ 1.43
USP6NL-204ENST00000606752 HSP90AA4PQ58FG1 418 aa24.01■■□□□ 1.43
USP6NL-204ENST00000606752 CDKAL1Q5VV42 579 aa24.01■■□□□ 1.43
USP6NL-204ENST00000606752 ZNF746Q6NUN9 644 aaPredicted RBP24.01■■□□□ 1.43
USP6NL-204ENST00000606752 RDM1Q8NG50 284 aa24.01■■□□□ 1.43
USP6NL-204ENST00000606752 MMP19Q99542 508 aa24.01■■□□□ 1.43
USP6NL-204ENST00000606752 SENP7Q9BQF6 1050 aa24.01■■□□□ 1.43
USP6NL-204ENST00000606752 NFASCO94856 1347 aa24.01■■□□□ 1.43
USP6NL-204ENST00000606752 WDR64B1ANS9 1081 aa24■■□□□ 1.43
USP6NL-204ENST00000606752 COBLO75128 1261 aa24■■□□□ 1.43
USP6NL-204ENST00000606752 ICAM3P32942 547 aa24■■□□□ 1.43
USP6NL-204ENST00000606752 GCLCP48506 637 aaPredicted RBP24■■□□□ 1.43
USP6NL-204ENST00000606752 CCNA1P78396 465 aa24■■□□□ 1.43
USP6NL-204ENST00000606752 BICDL2A1A5D9 508 aa24■■□□□ 1.43
USP6NL-204ENST00000606752 CCNE2O96020 404 aa24■■□□□ 1.43
USP6NL-204ENST00000606752 CCNE1P24864 410 aa24■■□□□ 1.43
USP6NL-204ENST00000606752 QARSP47897 775 aaKnown RBP24■■□□□ 1.43
USP6NL-204ENST00000606752 FSTL1Q12841 308 aa24■■□□□ 1.43
USP6NL-204ENST00000606752 FAM26FQ5R3K3 315 aa24■■□□□ 1.43
USP6NL-204ENST00000606752 RINT1Q6NUQ1 792 aa24■■□□□ 1.43
USP6NL-204ENST00000606752 FAM43AQ8N2R8 423 aa24■■□□□ 1.43
USP6NL-204ENST00000606752 GUF1Q8N442 669 aaKnown RBP24■■□□□ 1.43
USP6NL-204ENST00000606752 DNAJC25-GNG10A0A024R161 153 aa23.99■■□□□ 1.43
USP6NL-204ENST00000606752 ZBTB39O15060 712 aa23.99■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms