RNA–Protein interactions for RNA: ENST00000606676.1

SHROOM1-207, Transcript of shroom family member 1, humanhuman

Gene SHROOM1, Length 351 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-207ENST00000606676 PCYT2Q99447 389 aa14.56□□□□□ -0.08
SHROOM1-207ENST00000606676 SLC9A2Q9UBY0 812 aa14.56□□□□□ -0.08
SHROOM1-207ENST00000606676 DOCK5Q9H7D0 1870 aa14.56□□□□□ -0.08
SHROOM1-207ENST00000606676 IPO5O00410 1097 aaKnown RBP14.55□□□□□ -0.08
SHROOM1-207ENST00000606676 ATG7O95352 703 aa14.55□□□□□ -0.08
SHROOM1-207ENST00000606676 CCNE2O96020 404 aa14.55□□□□□ -0.08
SHROOM1-207ENST00000606676 SMIM10L2AP0DMW4 78 aa14.55□□□□□ -0.08
SHROOM1-207ENST00000606676 SMIM10L2BP0DMW5 78 aa14.55□□□□□ -0.08
SHROOM1-207ENST00000606676 ACTR2P61160 394 aa14.55□□□□□ -0.08
SHROOM1-207ENST00000606676 PPIGQ13427 754 aaKnown RBP eCLIP14.55□□□□□ -0.083e-7■■■■□ 23.2
SHROOM1-207ENST00000606676 RABEP1Q15276 862 aa14.55□□□□□ -0.08
SHROOM1-207ENST00000606676 OXER1Q8TDS5 423 aa14.55□□□□□ -0.08
SHROOM1-207ENST00000606676 WASF1Q92558 559 aa14.55□□□□□ -0.08
SHROOM1-207ENST00000606676 SCLYQ96I15 445 aa14.55□□□□□ -0.08
SHROOM1-207ENST00000606676 TBC1D32Q96NH3 1257 aa14.55□□□□□ -0.08
SHROOM1-207ENST00000606676 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.55□□□□□ -0.08
SHROOM1-207ENST00000606676 SDF4Q9BRK5 362 aa14.55□□□□□ -0.08
SHROOM1-207ENST00000606676 RNPEPQ9H4A4 650 aa14.55□□□□□ -0.08
SHROOM1-207ENST00000606676 CYP3A7-CYP3A51PA0A087WV96 503 aa14.54□□□□□ -0.08
SHROOM1-207ENST00000606676 PITPNM1O00562 1244 aa14.54□□□□□ -0.08
SHROOM1-207ENST00000606676 LGR5O75473 907 aa14.54□□□□□ -0.08
SHROOM1-207ENST00000606676 ACRP10323 421 aa14.54□□□□□ -0.08
SHROOM1-207ENST00000606676 XBP1P17861 261 aa14.54□□□□□ -0.08
SHROOM1-207ENST00000606676 CYP3A7P24462 503 aa14.54□□□□□ -0.08
SHROOM1-207ENST00000606676 SETQ01105 290 aaPredicted RBP14.54□□□□□ -0.08
SHROOM1-207ENST00000606676 PRR16Q569H4 304 aa14.54□□□□□ -0.08
SHROOM1-207ENST00000606676 TMEM240Q5SV17 173 aa14.54□□□□□ -0.08
SHROOM1-207ENST00000606676 KRT25Q7Z3Z0 450 aa14.54□□□□□ -0.08
SHROOM1-207ENST00000606676 CCDC83Q8IWF9 413 aa14.54□□□□□ -0.08
SHROOM1-207ENST00000606676 WNT8BQ93098 351 aa14.54□□□□□ -0.08
SHROOM1-207ENST00000606676 LRCH3Q96II8 777 aa14.54□□□□□ -0.08
SHROOM1-207ENST00000606676 ZSCAN31Q96LW9 406 aaPredicted RBP14.54□□□□□ -0.08
SHROOM1-207ENST00000606676 ZNF577Q9BSK1 485 aa14.54□□□□□ -0.08
SHROOM1-207ENST00000606676 UPF2Q9HAU5 1272 aaKnown RBP14.54□□□□□ -0.08
SHROOM1-207ENST00000606676 IL23AQ9NPF7 189 aa14.54□□□□□ -0.08
SHROOM1-207ENST00000606676 ZNF215Q9UL58 517 aaPredicted RBP14.54□□□□□ -0.08
SHROOM1-207ENST00000606676 NOD1Q9Y239 953 aa14.54□□□□□ -0.08
SHROOM1-207ENST00000606676 EMSYQ7Z589 1322 aa14.53□□□□□ -0.08
SHROOM1-207ENST00000606676 IGKV6D-21A0A0A0MT36 114 aa14.53□□□□□ -0.08
SHROOM1-207ENST00000606676 C17orf102A2RUQ5 167 aa14.53□□□□□ -0.08
SHROOM1-207ENST00000606676 DDX39AO00148 427 aaKnown RBP14.53□□□□□ -0.08
SHROOM1-207ENST00000606676 MSH4O15457 936 aa14.53□□□□□ -0.08
SHROOM1-207ENST00000606676 ADAM17P78536 824 aa14.53□□□□□ -0.08
SHROOM1-207ENST00000606676 RBL2Q08999 1139 aa14.53□□□□□ -0.08
SHROOM1-207ENST00000606676 PTK7Q13308 1070 aa14.53□□□□□ -0.08
SHROOM1-207ENST00000606676 BFSP2Q13515 415 aa14.53□□□□□ -0.08
SHROOM1-207ENST00000606676 NONOQ15233 471 aaKnown RBP eCLIP14.53□□□□□ -0.08
SHROOM1-207ENST00000606676 TRIM71Q2Q1W2 868 aaKnown RBP14.53□□□□□ -0.08
SHROOM1-207ENST00000606676 EARS2Q5JPH6 523 aaKnown RBP14.53□□□□□ -0.08
SHROOM1-207ENST00000606676 ABHD15Q6UXT9 468 aa14.53□□□□□ -0.08
SHROOM1-207ENST00000606676 SERINC5Q86VE9 423 aa14.53□□□□□ -0.08
SHROOM1-207ENST00000606676 CAGE1Q8TC20 777 aa14.53□□□□□ -0.08
SHROOM1-207ENST00000606676 MBOAT7Q96N66 472 aa14.53□□□□□ -0.08
SHROOM1-207ENST00000606676 BACH2Q9BYV9 841 aa14.53□□□□□ -0.08
SHROOM1-207ENST00000606676 SMARCAD1Q9H4L7 1026 aa14.53□□□□□ -0.08
SHROOM1-207ENST00000606676 TBC1D22BQ9NU19 505 aa14.53□□□□□ -0.08
SHROOM1-207ENST00000606676 SETD4Q9NVD3 440 aa14.53□□□□□ -0.08
SHROOM1-207ENST00000606676 CDH23Q9H251 3354 aa14.53□□□□□ -0.08
SHROOM1-207ENST00000606676 TREHO43280 583 aa14.52□□□□□ -0.09
SHROOM1-207ENST00000606676 CD2BP2O95400 341 aaKnown RBP14.52□□□□□ -0.09
SHROOM1-207ENST00000606676 TDP2O95551 362 aa14.52□□□□□ -0.09
SHROOM1-207ENST00000606676 IQCF3P0C7M6 154 aa14.52□□□□□ -0.09
SHROOM1-207ENST00000606676 CKBP12277 381 aa14.52□□□□□ -0.09
SHROOM1-207ENST00000606676 NR5A1Q13285 461 aa14.52□□□□□ -0.09
SHROOM1-207ENST00000606676 GPNMBQ14956 572 aa14.52□□□□□ -0.09
SHROOM1-207ENST00000606676 INF2Q27J81 1249 aa14.52□□□□□ -0.09
SHROOM1-207ENST00000606676 Q4G0T1 1027 aa14.52□□□□□ -0.09
SHROOM1-207ENST00000606676 RASIP1Q5U651 963 aa14.52□□□□□ -0.09
SHROOM1-207ENST00000606676 TRAF7Q6Q0C0 670 aa14.52□□□□□ -0.09
SHROOM1-207ENST00000606676 ZNF365Q70YC5 407 aa14.52□□□□□ -0.09
SHROOM1-207ENST00000606676 AFAP1L1Q8TED9 768 aa14.52□□□□□ -0.09
SHROOM1-207ENST00000606676 GLG1Q92896 1179 aa14.52□□□□□ -0.09
SHROOM1-207ENST00000606676 SLC5A5Q92911 643 aa14.52□□□□□ -0.09
SHROOM1-207ENST00000606676 TNFRSF25Q93038 417 aa14.52□□□□□ -0.09
SHROOM1-207ENST00000606676 ATP6V0A1Q93050 837 aa14.52□□□□□ -0.09
SHROOM1-207ENST00000606676 LLPHQ9BRT6 129 aaKnown RBP14.52□□□□□ -0.09
SHROOM1-207ENST00000606676 SH2B1Q9NRF2 756 aaPredicted RBP14.52□□□□□ -0.09
SHROOM1-207ENST00000606676 ERAP1Q9NZ08 941 aa14.52□□□□□ -0.09
SHROOM1-207ENST00000606676 NRCAMQ92823 1304 aa14.51□□□□□ -0.09
SHROOM1-207ENST00000606676 CCDC194A0A1B0GVG4 234 aa14.51□□□□□ -0.09
SHROOM1-207ENST00000606676 FAM205CA6NFA0 338 aa14.51□□□□□ -0.09
SHROOM1-207ENST00000606676 RBAK-RBAKDNI3L0D1 243 aa14.51□□□□□ -0.09
SHROOM1-207ENST00000606676 MMP1P03956 469 aa14.51□□□□□ -0.09
SHROOM1-207ENST00000606676 MARK3P27448 753 aa14.51□□□□□ -0.09
SHROOM1-207ENST00000606676 KRT40Q6A162 431 aa14.51□□□□□ -0.09
SHROOM1-207ENST00000606676 PIK3AP1Q6ZUJ8 805 aa14.51□□□□□ -0.09
SHROOM1-207ENST00000606676 PLPPR4Q7Z2D5 763 aa14.51□□□□□ -0.09
SHROOM1-207ENST00000606676 RETREG2Q8NC44 543 aa14.51□□□□□ -0.09
SHROOM1-207ENST00000606676 LMBR1Q8WVP7 490 aa14.51□□□□□ -0.09
SHROOM1-207ENST00000606676 RNPC3Q96LT9 517 aaKnown RBP14.51□□□□□ -0.09
SHROOM1-207ENST00000606676 BTBD18B2RXH4 712 aa14.5□□□□□ -0.09
SHROOM1-207ENST00000606676 ST18O60284 1047 aa14.5□□□□□ -0.09
SHROOM1-207ENST00000606676 FGBP02675 491 aa14.5□□□□□ -0.09
SHROOM1-207ENST00000606676 SELPP16109 830 aa14.5□□□□□ -0.09
SHROOM1-207ENST00000606676 KRT2P35908 639 aa14.5□□□□□ -0.09
SHROOM1-207ENST00000606676 STAT5BP51692 787 aa14.5□□□□□ -0.09
SHROOM1-207ENST00000606676 FOSBP53539 338 aa14.5□□□□□ -0.09
SHROOM1-207ENST00000606676 PLCB4Q15147 1175 aa14.5□□□□□ -0.09
SHROOM1-207ENST00000606676 MARCH8Q5T0T0 291 aa14.5□□□□□ -0.09
SHROOM1-207ENST00000606676 ZNF746Q6NUN9 644 aaPredicted RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms