RNA–Protein interactions for RNA: ENST00000604743.5

TUBE1-208, Transcript of tubulin epsilon 1, humanhuman

TSL 3

Gene TUBE1, Length 959 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-208ENST00000604743 TET1Q8NFU7 2136 aa16.4■□□□□ 0.22
TUBE1-208ENST00000604743 LAMA2P24043 3122 aaKnown RBP16.4■□□□□ 0.22
TUBE1-208ENST00000604743 FGBP02675 491 aa16.39■□□□□ 0.21
TUBE1-208ENST00000604743 XBP1P17861 261 aa16.39■□□□□ 0.21
TUBE1-208ENST00000604743 PRR16Q569H4 304 aa16.39■□□□□ 0.21
TUBE1-208ENST00000604743 PSRC1Q6PGN9 363 aaPredicted RBP16.39■□□□□ 0.21
TUBE1-208ENST00000604743 NIPA1Q7RTP0 329 aa16.39■□□□□ 0.21
TUBE1-208ENST00000604743 RPUSD2Q8IZ73 545 aaKnown RBP16.39■□□□□ 0.21
TUBE1-208ENST00000604743 CRYGNQ8WXF5 182 aa16.39■□□□□ 0.21
TUBE1-208ENST00000604743 DHX38Q92620 1227 aaKnown RBP16.39■□□□□ 0.21
TUBE1-208ENST00000604743 ATP6V0A1Q93050 837 aa16.39■□□□□ 0.21
TUBE1-208ENST00000604743 RNPEPQ9H4A4 650 aa16.39■□□□□ 0.21
TUBE1-208ENST00000604743 GJB4Q9NTQ9 266 aa16.39■□□□□ 0.21
TUBE1-208ENST00000604743 SETD4Q9NVD3 440 aa16.39■□□□□ 0.21
TUBE1-208ENST00000604743 STK36Q9NRP7 1315 aa16.39■□□□□ 0.21
TUBE1-208ENST00000604743 MYH9P35579 1960 aaKnown RBP16.38■□□□□ 0.21
TUBE1-208ENST00000604743 IGLV3-22A0A075B6J6 115 aa16.38■□□□□ 0.21
TUBE1-208ENST00000604743 PITPNM1O00562 1244 aa16.38■□□□□ 0.21
TUBE1-208ENST00000604743 IQCF3P0C7M6 154 aa16.38■□□□□ 0.21
TUBE1-208ENST00000604743 FOSBP53539 338 aa16.38■□□□□ 0.21
TUBE1-208ENST00000604743 ACTR2P61160 394 aa16.38■□□□□ 0.21
TUBE1-208ENST00000604743 PTK7Q13308 1070 aa16.38■□□□□ 0.21
TUBE1-208ENST00000604743 OTOP2Q7RTS6 562 aa16.38■□□□□ 0.21
TUBE1-208ENST00000604743 CAGE1Q8TC20 777 aa16.38■□□□□ 0.21
TUBE1-208ENST00000604743 TBCKQ8TEA7 893 aa16.38■□□□□ 0.21
TUBE1-208ENST00000604743 ZNF577Q9BSK1 485 aa16.38■□□□□ 0.21
TUBE1-208ENST00000604743 NFASCO94856 1347 aa16.38■□□□□ 0.21
TUBE1-208ENST00000604743 RBAK-RBAKDNI3L0D1 243 aa16.37■□□□□ 0.21
TUBE1-208ENST00000604743 TREHO43280 583 aa16.37■□□□□ 0.21
TUBE1-208ENST00000604743 JAK2O60674 1132 aa16.37■□□□□ 0.21
TUBE1-208ENST00000604743 GALNT17Q6IS24 598 aa16.37■□□□□ 0.21
TUBE1-208ENST00000604743 Q7L0L9 218 aa16.37■□□□□ 0.21
TUBE1-208ENST00000604743 NSUN7Q8NE18 718 aaKnown RBP16.37■□□□□ 0.21
TUBE1-208ENST00000604743 WASF1Q92558 559 aa16.37■□□□□ 0.21
TUBE1-208ENST00000604743 WNT8BQ93098 351 aa16.37■□□□□ 0.21
TUBE1-208ENST00000604743 KIF2CQ99661 725 aa16.37■□□□□ 0.21
TUBE1-208ENST00000604743 PHF20Q9BVI0 1012 aa16.37■□□□□ 0.21
TUBE1-208ENST00000604743 FTOQ9C0B1 505 aaKnown RBP eCLIP16.37■□□□□ 0.21
TUBE1-208ENST00000604743 SMARCAD1Q9H4L7 1026 aa16.37■□□□□ 0.21
TUBE1-208ENST00000604743 AZI2Q9H6S1 392 aa16.37■□□□□ 0.21
TUBE1-208ENST00000604743 ERAP1Q9NZ08 941 aa16.37■□□□□ 0.21
TUBE1-208ENST00000604743 LIMCH1Q9UPQ0 1083 aa16.37■□□□□ 0.21
TUBE1-208ENST00000604743 WDR81Q562E7 1941 aa16.37■□□□□ 0.21
TUBE1-208ENST00000604743 ZBBXA8MT70 800 aa16.36■□□□□ 0.21
TUBE1-208ENST00000604743 IPO5O00410 1097 aaKnown RBP16.36■□□□□ 0.21
TUBE1-208ENST00000604743 CKBP12277 381 aa16.36■□□□□ 0.21
TUBE1-208ENST00000604743 FDPSP14324 419 aaKnown RBP16.36■□□□□ 0.21
TUBE1-208ENST00000604743 SELPP16109 830 aa16.36■□□□□ 0.21
TUBE1-208ENST00000604743 CIITAP33076 1130 aa16.36■□□□□ 0.21
TUBE1-208ENST00000604743 SETQ01105 290 aaPredicted RBP16.36■□□□□ 0.21
TUBE1-208ENST00000604743 NPY5RQ15761 445 aa16.36■□□□□ 0.21
TUBE1-208ENST00000604743 LRRC8DQ7L1W4 858 aa16.36■□□□□ 0.21
TUBE1-208ENST00000604743 CCDC83Q8IWF9 413 aa16.36■□□□□ 0.21
TUBE1-208ENST00000604743 DAGLBQ8NCG7 672 aa16.36■□□□□ 0.21
TUBE1-208ENST00000604743 AFAP1L1Q8TED9 768 aa16.36■□□□□ 0.21
TUBE1-208ENST00000604743 PCYT2Q99447 389 aa16.36■□□□□ 0.21
TUBE1-208ENST00000604743 UPF2Q9HAU5 1272 aaKnown RBP16.36■□□□□ 0.21
TUBE1-208ENST00000604743 CXXC1Q9P0U4 656 aaPredicted RBP16.36■□□□□ 0.21
TUBE1-208ENST00000604743 GBF1Q92538 1859 aa16.35■□□□□ 0.21
TUBE1-208ENST00000604743 M0R2N6 131 aa16.35■□□□□ 0.21
TUBE1-208ENST00000604743 BACH1O14867 736 aa16.35■□□□□ 0.21
TUBE1-208ENST00000604743 EDIL3O43854 480 aa16.35■□□□□ 0.21
TUBE1-208ENST00000604743 CCNE2O96020 404 aa16.35■□□□□ 0.21
TUBE1-208ENST00000604743 GNAT1P11488 350 aa16.35■□□□□ 0.21
TUBE1-208ENST00000604743 THPOP40225 353 aa16.35■□□□□ 0.21
TUBE1-208ENST00000604743 RBM25P49756 843 aaKnown RBP16.35■□□□□ 0.21
TUBE1-208ENST00000604743 STAT5BP51692 787 aa16.35■□□□□ 0.21
TUBE1-208ENST00000604743 USP11P51784 963 aa16.35■□□□□ 0.21
TUBE1-208ENST00000604743 IGBP1P78318 339 aa16.35■□□□□ 0.21
TUBE1-208ENST00000604743 ST3GAL1Q11201 340 aa16.35■□□□□ 0.21
TUBE1-208ENST00000604743 PPFIA1Q13136 1202 aa16.35■□□□□ 0.21
TUBE1-208ENST00000604743 NONOQ15233 471 aaKnown RBP eCLIP16.35■□□□□ 0.21
TUBE1-208ENST00000604743 INF2Q27J81 1249 aa16.35■□□□□ 0.21
TUBE1-208ENST00000604743 ZNF618Q5T7W0 954 aa16.35■□□□□ 0.21
TUBE1-208ENST00000604743 SERINC5Q86VE9 423 aa16.35■□□□□ 0.21
TUBE1-208ENST00000604743 FAM177A1Q8N128 213 aaPredicted RBP16.35■□□□□ 0.21
TUBE1-208ENST00000604743 DEFB123Q8N688 67 aa16.35■□□□□ 0.21
TUBE1-208ENST00000604743 OXER1Q8TDS5 423 aa16.35■□□□□ 0.21
TUBE1-208ENST00000604743 HERVK_113Q902F9 699 aa16.35■□□□□ 0.21
TUBE1-208ENST00000604743 VWCEQ96DN2 955 aa16.35■□□□□ 0.21
TUBE1-208ENST00000604743 FAM161BQ96MY7 647 aa16.35■□□□□ 0.21
TUBE1-208ENST00000604743 MTIF3Q9H2K0 278 aaKnown RBP16.35■□□□□ 0.21
TUBE1-208ENST00000604743 TCEAL9Q9UHQ7 104 aa16.35■□□□□ 0.21
TUBE1-208ENST00000604743 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.34■□□□□ 0.21
TUBE1-208ENST00000604743 CCDC194A0A1B0GVG4 234 aa16.34■□□□□ 0.21
TUBE1-208ENST00000604743 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.34■□□□□ 0.21
TUBE1-208ENST00000604743 GRXCR1A8MXD5 290 aa16.34■□□□□ 0.21
TUBE1-208ENST00000604743 DHX15O43143 795 aaKnown RBP16.34■□□□□ 0.21
TUBE1-208ENST00000604743 LGR5O75473 907 aa16.34■□□□□ 0.21
TUBE1-208ENST00000604743 TDP2O95551 362 aa16.34■□□□□ 0.21
TUBE1-208ENST00000604743 RFC2P35250 354 aa16.34■□□□□ 0.21
TUBE1-208ENST00000604743 TRIM71Q2Q1W2 868 aaKnown RBP16.34■□□□□ 0.21
TUBE1-208ENST00000604743 FAM109BQ6ICB4 259 aaPredicted RBP16.34■□□□□ 0.21
TUBE1-208ENST00000604743 KRT25Q7Z3Z0 450 aa16.34■□□□□ 0.21
TUBE1-208ENST00000604743 LMBR1Q8WVP7 490 aa16.34■□□□□ 0.21
TUBE1-208ENST00000604743 GJA10Q969M2 543 aa16.34■□□□□ 0.21
TUBE1-208ENST00000604743 TBC1D22BQ9NU19 505 aa16.34■□□□□ 0.21
TUBE1-208ENST00000604743 TRPC6Q9Y210 931 aa16.34■□□□□ 0.21
TUBE1-208ENST00000604743 EMSYQ7Z589 1322 aa16.34■□□□□ 0.21
TUBE1-208ENST00000604743 EVPLQ92817 2033 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms