RNA–Protein interactions for RNA: ENST00000604213.1

LYSMD4-211, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best)

Gene LYSMD4, Length 2,356 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-211ENST00000604213 TAF1P21675 1872 aa16.73■□□□□ 0.27
LYSMD4-211ENST00000604213 GOLGA6L7A0A1B0GV03 622 aa16.73■□□□□ 0.27
LYSMD4-211ENST00000604213 PPP2R2AP63151 447 aa16.73■□□□□ 0.27
LYSMD4-211ENST00000604213 ENOX2Q16206 610 aaKnown RBP16.73■□□□□ 0.27
LYSMD4-211ENST00000604213 ERFEQ4G0M1 354 aa16.73■□□□□ 0.27
LYSMD4-211ENST00000604213 SOGA3Q5TF21 947 aa16.73■□□□□ 0.27
LYSMD4-211ENST00000604213 TEX2Q8IWB9 1127 aa16.73■□□□□ 0.27
LYSMD4-211ENST00000604213 TRIM59Q8IWR1 403 aa16.73■□□□□ 0.27
LYSMD4-211ENST00000604213 SLC44A5Q8NCS7 719 aa16.73■□□□□ 0.27
LYSMD4-211ENST00000604213 RAPGEF5Q92565 580 aa16.73■□□□□ 0.27
LYSMD4-211ENST00000604213 DNAJC19Q96DA6 116 aa16.73■□□□□ 0.27
LYSMD4-211ENST00000604213 CEP63Q96MT8 703 aa16.73■□□□□ 0.27
LYSMD4-211ENST00000604213 GANQ9H2C0 597 aa16.73■□□□□ 0.27
LYSMD4-211ENST00000604213 FBXL5Q9UKA1 691 aa16.73■□□□□ 0.27
LYSMD4-211ENST00000604213 SLC37A4O43826 429 aa16.72■□□□□ 0.27
LYSMD4-211ENST00000604213 EDIL3O43854 480 aa16.72■□□□□ 0.27
LYSMD4-211ENST00000604213 CEP104O60308 925 aa16.72■□□□□ 0.27
LYSMD4-211ENST00000604213 HIBADHP31937 336 aaKnown RBP16.72■□□□□ 0.27
LYSMD4-211ENST00000604213 FLT3P36888 993 aa16.72■□□□□ 0.27
LYSMD4-211ENST00000604213 CDR1P51861 262 aa16.72■□□□□ 0.27
LYSMD4-211ENST00000604213 COASYQ13057 564 aa16.72■□□□□ 0.27
LYSMD4-211ENST00000604213 CYB5D1Q6P9G0 228 aa16.72■□□□□ 0.27
LYSMD4-211ENST00000604213 PARP9Q8IXQ6 854 aa16.72■□□□□ 0.27
LYSMD4-211ENST00000604213 FUKQ8N0W3 1084 aa16.72■□□□□ 0.27
LYSMD4-211ENST00000604213 REXO1Q8N1G1 1221 aaKnown RBP16.72■□□□□ 0.27
LYSMD4-211ENST00000604213 LRRC57Q8N9N7 239 aa16.72■□□□□ 0.27
LYSMD4-211ENST00000604213 PROCA1Q8NCQ7 364 aaPredicted RBP16.72■□□□□ 0.27
LYSMD4-211ENST00000604213 CELF1Q92879 486 aaKnown RBP16.72■□□□□ 0.27
LYSMD4-211ENST00000604213 CALR3Q96L12 384 aaKnown RBP16.72■□□□□ 0.27
LYSMD4-211ENST00000604213 LRRC27Q9C0I9 530 aa16.72■□□□□ 0.27
LYSMD4-211ENST00000604213 BCCIPQ9P287 314 aaKnown RBP eCLIP16.72■□□□□ 0.27
LYSMD4-211ENST00000604213 POTEMA6NI47 508 aa16.72■□□□□ 0.27
LYSMD4-211ENST00000604213 SART1O43290 800 aaKnown RBP16.72■□□□□ 0.27
LYSMD4-211ENST00000604213 CHRM1P11229 460 aaPredicted RBP16.72■□□□□ 0.27
LYSMD4-211ENST00000604213 PDIA5Q14554 519 aa16.72■□□□□ 0.27
LYSMD4-211ENST00000604213 TMEM266Q2M3C6 531 aa16.72■□□□□ 0.27
LYSMD4-211ENST00000604213 LACTB2Q53H82 288 aaPredicted RBP16.72■□□□□ 0.27
LYSMD4-211ENST00000604213 FAM228AQ86W67 206 aa16.72■□□□□ 0.27
LYSMD4-211ENST00000604213 ZNF444Q8N0Y2 327 aaPredicted RBP16.72■□□□□ 0.27
LYSMD4-211ENST00000604213 SNX29Q8TEQ0 813 aa16.72■□□□□ 0.27
LYSMD4-211ENST00000604213 AP1M1Q9BXS5 423 aa16.72■□□□□ 0.27
LYSMD4-211ENST00000604213 GOLPH3Q9H4A6 298 aa16.72■□□□□ 0.27
LYSMD4-211ENST00000604213 KANSL2Q9H9L4 492 aa16.72■□□□□ 0.27
LYSMD4-211ENST00000604213 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.72■□□□□ 0.27
LYSMD4-211ENST00000604213 PSEN1P49768 467 aa16.71■□□□□ 0.27
LYSMD4-211ENST00000604213 MARSP56192 900 aaKnown RBP16.71■□□□□ 0.27
LYSMD4-211ENST00000604213 SNCBQ16143 134 aa16.71■□□□□ 0.27
LYSMD4-211ENST00000604213 GIMAP7Q8NHV1 300 aa16.71■□□□□ 0.27
LYSMD4-211ENST00000604213 TATDN2Q93075 761 aa16.71■□□□□ 0.27
LYSMD4-211ENST00000604213 FGFBP2Q9BYJ0 223 aa16.71■□□□□ 0.27
LYSMD4-211ENST00000604213 HAUS2Q9NVX0 235 aa16.71■□□□□ 0.27
LYSMD4-211ENST00000604213 NOVA2Q9UNW9 492 aaKnown RBP16.71■□□□□ 0.27
LYSMD4-211ENST00000604213 JAG2Q9Y219 1238 aa16.71■□□□□ 0.27
LYSMD4-211ENST00000604213 BACH1O14867 736 aa16.71■□□□□ 0.26
LYSMD4-211ENST00000604213 TDP2O95551 362 aa16.71■□□□□ 0.26
LYSMD4-211ENST00000604213 PDHBP11177 359 aa16.71■□□□□ 0.26
LYSMD4-211ENST00000604213 RASA1P20936 1047 aa16.71■□□□□ 0.26
LYSMD4-211ENST00000604213 MTMR3Q13615 1198 aa16.71■□□□□ 0.26
LYSMD4-211ENST00000604213 ECM1Q16610 540 aa16.71■□□□□ 0.26
LYSMD4-211ENST00000604213 ODF2Q5BJF6 829 aa16.71■□□□□ 0.26
LYSMD4-211ENST00000604213 KRT79Q5XKE5 535 aa16.71■□□□□ 0.26
LYSMD4-211ENST00000604213 CACNA2D3Q8IZS8 1091 aa16.71■□□□□ 0.26
LYSMD4-211ENST00000604213 SH3RF3Q8TEJ3 882 aaPredicted RBP16.71■□□□□ 0.26
LYSMD4-211ENST00000604213 UBLCP1Q8WVY7 318 aaPredicted RBP16.71■□□□□ 0.26
LYSMD4-211ENST00000604213 SGSM3Q96HU1 749 aa16.71■□□□□ 0.26
LYSMD4-211ENST00000604213 DCDC2CA8MYV0 355 aa16.7■□□□□ 0.26
LYSMD4-211ENST00000604213 PGRMC1O00264 195 aaKnown RBP16.7■□□□□ 0.26
LYSMD4-211ENST00000604213 GNA14O95837 355 aa16.7■□□□□ 0.26
LYSMD4-211ENST00000604213 ELF1P32519 619 aa16.7■□□□□ 0.26
LYSMD4-211ENST00000604213 SCTRP47872 440 aa16.7■□□□□ 0.26
LYSMD4-211ENST00000604213 PTK2Q05397 1052 aa16.7■□□□□ 0.26
LYSMD4-211ENST00000604213 FAM26FQ5R3K3 315 aa16.7■□□□□ 0.26
LYSMD4-211ENST00000604213 C10orf76Q5T2E6 689 aa16.7■□□□□ 0.26
LYSMD4-211ENST00000604213 USP17L2Q6R6M4 530 aa16.7■□□□□ 0.26
LYSMD4-211ENST00000604213 DZIP1Q86YF9 867 aaKnown RBP16.7■□□□□ 0.26
LYSMD4-211ENST00000604213 METTL13Q8N6R0 699 aa16.7■□□□□ 0.26
LYSMD4-211ENST00000604213 MAGEC3Q8TD91 643 aa16.7■□□□□ 0.26
LYSMD4-211ENST00000604213 PIGSQ96S52 555 aa16.7■□□□□ 0.26
LYSMD4-211ENST00000604213 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.7■□□□□ 0.26
LYSMD4-211ENST00000604213 DDX47Q9H0S4 455 aaKnown RBP16.7■□□□□ 0.26
LYSMD4-211ENST00000604213 VAT1LQ9HCJ6 419 aa16.7■□□□□ 0.26
LYSMD4-211ENST00000604213 SUFUQ9UMX1 484 aa16.7■□□□□ 0.26
LYSMD4-211ENST00000604213 NOC2LQ9Y3T9 749 aaKnown RBP16.7■□□□□ 0.26
LYSMD4-211ENST00000604213 CCDC88AQ3V6T2 1871 aa16.7■□□□□ 0.26
LYSMD4-211ENST00000604213 ESYT2A0FGR8 921 aa16.7■□□□□ 0.26
LYSMD4-211ENST00000604213 DAPK3O43293 454 aa16.7■□□□□ 0.26
LYSMD4-211ENST00000604213 SEPT2Q15019 361 aa16.7■□□□□ 0.26
LYSMD4-211ENST00000604213 ZNF571Q7Z3V5 609 aaPredicted RBP16.7■□□□□ 0.26
LYSMD4-211ENST00000604213 IRF2BP2Q7Z5L9 587 aa16.7■□□□□ 0.26
LYSMD4-211ENST00000604213 CCDC50Q8IVM0 306 aa16.7■□□□□ 0.26
LYSMD4-211ENST00000604213 PANK4Q9NVE7 773 aa16.7■□□□□ 0.26
LYSMD4-211ENST00000604213 SEC63Q9UGP8 760 aaKnown RBP16.7■□□□□ 0.26
LYSMD4-211ENST00000604213 TPX2Q9ULW0 747 aaKnown RBP16.7■□□□□ 0.26
LYSMD4-211ENST00000604213 CEP83Q9Y592 693 aa16.7■□□□□ 0.26
LYSMD4-211ENST00000604213 MAST2Q6P0Q8 1798 aa16.69■□□□□ 0.26
LYSMD4-211ENST00000604213 DRD4P21917 467 aa16.69■□□□□ 0.26
LYSMD4-211ENST00000604213 MAGOHP61326 146 aaKnown RBP16.69■□□□□ 0.26
LYSMD4-211ENST00000604213 DPY19L2P1Q6NXN4 242 aa16.69■□□□□ 0.26
LYSMD4-211ENST00000604213 TMC3Q7Z5M5 1100 aa16.69■□□□□ 0.26
LYSMD4-211ENST00000604213 MAGOHBQ96A72 148 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms