RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 PKD2L1Q9P0L9 805 aa13.13□□□□□ -0.31
CCDC12-209ENST00000604164 PCDH10Q9P2E7 1040 aa13.13□□□□□ -0.31
CCDC12-209ENST00000604164 UMODL1Q5DID0 1318 aa13.13□□□□□ -0.31
CCDC12-209ENST00000604164 EMSYQ7Z589 1322 aa13.13□□□□□ -0.31
CCDC12-209ENST00000604164 TMEM265A0A087WTH1 108 aa13.12□□□□□ -0.31
CCDC12-209ENST00000604164 IPO5O00410 1097 aaKnown RBP13.12□□□□□ -0.31
CCDC12-209ENST00000604164 PPFIA3O75145 1194 aa13.12□□□□□ -0.31
CCDC12-209ENST00000604164 SEC24BO95487 1268 aa13.12□□□□□ -0.31
CCDC12-209ENST00000604164 ACRP10323 421 aa13.12□□□□□ -0.31
CCDC12-209ENST00000604164 HOXC8P31273 242 aa13.12□□□□□ -0.31
CCDC12-209ENST00000604164 SLC26A2P50443 739 aa13.12□□□□□ -0.31
CCDC12-209ENST00000604164 C8orf34Q49A92 452 aa13.12□□□□□ -0.31
CCDC12-209ENST00000604164 ZNF697Q5TEC3 545 aa13.12□□□□□ -0.31
CCDC12-209ENST00000604164 LRRC8DQ7L1W4 858 aa13.12□□□□□ -0.31
CCDC12-209ENST00000604164 C16orf59Q7L2K0 433 aa13.12□□□□□ -0.31
CCDC12-209ENST00000604164 KRT25Q7Z3Z0 450 aa13.12□□□□□ -0.31
CCDC12-209ENST00000604164 SERINC5Q86VE9 423 aa13.12□□□□□ -0.31
CCDC12-209ENST00000604164 DEFB123Q8N688 67 aa13.12□□□□□ -0.31
CCDC12-209ENST00000604164 CYP2W1Q8TAV3 490 aa13.12□□□□□ -0.31
CCDC12-209ENST00000604164 GTF3C6Q969F1 213 aa13.12□□□□□ -0.31
CCDC12-209ENST00000604164 SCLYQ96I15 445 aa13.12□□□□□ -0.31
CCDC12-209ENST00000604164 ZNF577Q9BSK1 485 aa13.12□□□□□ -0.31
CCDC12-209ENST00000604164 FTOQ9C0B1 505 aaKnown RBP eCLIP13.12□□□□□ -0.31
CCDC12-209ENST00000604164 BCAS3Q9H6U6 928 aa13.12□□□□□ -0.31
CCDC12-209ENST00000604164 BRMS1Q9HCU9 246 aa13.12□□□□□ -0.31
CCDC12-209ENST00000604164 GSTTP1A0A1W2PQM5 241 aa13.11□□□□□ -0.31
CCDC12-209ENST00000604164 RRN3P2A6NIE6 340 aa13.11□□□□□ -0.31
CCDC12-209ENST00000604164 FAM86B1E9PN63 330 aa13.11□□□□□ -0.31
CCDC12-209ENST00000604164 LGR5O75473 907 aa13.11□□□□□ -0.31
CCDC12-209ENST00000604164 FAM86B2P0C5J1 330 aa13.11□□□□□ -0.31
CCDC12-209ENST00000604164 ARP10275 920 aa13.11□□□□□ -0.31
CCDC12-209ENST00000604164 CKBP12277 381 aa13.11□□□□□ -0.31
CCDC12-209ENST00000604164 ACTR2P61160 394 aa13.11□□□□□ -0.31
CCDC12-209ENST00000604164 KRT76Q01546 638 aa13.11□□□□□ -0.31
CCDC12-209ENST00000604164 NONOQ15233 471 aaKnown RBP eCLIP13.11□□□□□ -0.318e-10■■■■□ 19.9
CCDC12-209ENST00000604164 PRR16Q569H4 304 aa13.11□□□□□ -0.31
CCDC12-209ENST00000604164 RASIP1Q5U651 963 aa13.11□□□□□ -0.31
CCDC12-209ENST00000604164 FAM160B1Q5W0V3 765 aa13.11□□□□□ -0.31
CCDC12-209ENST00000604164 MIS18BP1Q6P0N0 1132 aa13.11□□□□□ -0.31
CCDC12-209ENST00000604164 TAF2Q6P1X5 1199 aa13.11□□□□□ -0.31
CCDC12-209ENST00000604164 PLPPR4Q7Z2D5 763 aa13.11□□□□□ -0.31
CCDC12-209ENST00000604164 DEFB128Q7Z7B8 93 aa13.11□□□□□ -0.31
CCDC12-209ENST00000604164 RSPH3Q86UC2 560 aa13.11□□□□□ -0.31
CCDC12-209ENST00000604164 SMAP1Q8IYB5 467 aaPredicted RBP13.11□□□□□ -0.31
CCDC12-209ENST00000604164 PPP1R13LQ8WUF5 828 aa13.11□□□□□ -0.31
CCDC12-209ENST00000604164 NAP1L4Q99733 375 aaKnown RBP13.11□□□□□ -0.31
CCDC12-209ENST00000604164 RNPEPQ9H4A4 650 aa13.11□□□□□ -0.31
CCDC12-209ENST00000604164 ORC3Q9UBD5 711 aaPredicted RBP13.11□□□□□ -0.31
CCDC12-209ENST00000604164 LIMCH1Q9UPQ0 1083 aa13.11□□□□□ -0.31
CCDC12-209ENST00000604164 SLC4A7Q9Y6M7 1214 aa13.11□□□□□ -0.31
CCDC12-209ENST00000604164 RANBP2P49792 3224 aaKnown RBP13.1□□□□□ -0.31
CCDC12-209ENST00000604164 IGLV3-22A0A075B6J6 115 aa13.1□□□□□ -0.31
CCDC12-209ENST00000604164 CCDC194A0A1B0GVG4 234 aa13.1□□□□□ -0.31
CCDC12-209ENST00000604164 EFCAB14O75071 495 aa13.1□□□□□ -0.31
CCDC12-209ENST00000604164 BAIAP3O94812 1187 aa13.1□□□□□ -0.31
CCDC12-209ENST00000604164 STAT5BP51692 787 aa13.1□□□□□ -0.31
CCDC12-209ENST00000604164 PPFIA1Q13136 1202 aa13.1□□□□□ -0.31
CCDC12-209ENST00000604164 TRIM29Q14134 588 aa13.1□□□□□ -0.31
CCDC12-209ENST00000604164 RAB30Q15771 203 aa13.1□□□□□ -0.31
CCDC12-209ENST00000604164 ME3Q16798 604 aa13.1□□□□□ -0.31
CCDC12-209ENST00000604164 ZNF746Q6NUN9 644 aaPredicted RBP13.1□□□□□ -0.31
CCDC12-209ENST00000604164 MOXD1Q6UVY6 613 aa13.1□□□□□ -0.31
CCDC12-209ENST00000604164 OTOP2Q7RTS6 562 aa13.1□□□□□ -0.31
CCDC12-209ENST00000604164 TRIM50Q86XT4 487 aa13.1□□□□□ -0.31
CCDC12-209ENST00000604164 RASGRP4Q8TDF6 673 aa13.1□□□□□ -0.31
CCDC12-209ENST00000604164 TBCKQ8TEA7 893 aa13.1□□□□□ -0.31
CCDC12-209ENST00000604164 DHX38Q92620 1227 aaKnown RBP13.1□□□□□ -0.31
CCDC12-209ENST00000604164 ZSCAN31Q96LW9 406 aaPredicted RBP13.1□□□□□ -0.31
CCDC12-209ENST00000604164 CTAGE1Q96RT6 745 aa13.1□□□□□ -0.31
CCDC12-209ENST00000604164 PHF20Q9BVI0 1012 aa13.1□□□□□ -0.31
CCDC12-209ENST00000604164 MSRAQ9UJ68 235 aa13.1□□□□□ -0.31
CCDC12-209ENST00000604164 ZBBXA8MT70 800 aa13.09□□□□□ -0.31
CCDC12-209ENST00000604164 BACH1O14867 736 aa13.09□□□□□ -0.31
CCDC12-209ENST00000604164 ATG7O95352 703 aa13.09□□□□□ -0.31
CCDC12-209ENST00000604164 THPOP40225 353 aa13.09□□□□□ -0.31
CCDC12-209ENST00000604164 RBM25P49756 843 aaKnown RBP13.09□□□□□ -0.31
CCDC12-209ENST00000604164 ITGB3BPQ13352 177 aaPredicted RBP13.09□□□□□ -0.31
CCDC12-209ENST00000604164 PHOSPHO2Q8TCD6 241 aa13.09□□□□□ -0.31
CCDC12-209ENST00000604164 LMBR1Q8WVP7 490 aa13.09□□□□□ -0.31
CCDC12-209ENST00000604164 RIT2Q99578 217 aa13.09□□□□□ -0.31
CCDC12-209ENST00000604164 SH2B1Q9NRF2 756 aaPredicted RBP13.09□□□□□ -0.31
CCDC12-209ENST00000604164 SETD4Q9NVD3 440 aa13.09□□□□□ -0.31
CCDC12-209ENST00000604164 TRPC6Q9Y210 931 aa13.09□□□□□ -0.31
CCDC12-209ENST00000604164 RSPH10B2B2RC85 870 aa13.08□□□□□ -0.32
CCDC12-209ENST00000604164 M0R2N6 131 aa13.08□□□□□ -0.32
CCDC12-209ENST00000604164 DDX39AO00148 427 aaKnown RBP13.08□□□□□ -0.32
CCDC12-209ENST00000604164 TREHO43280 583 aa13.08□□□□□ -0.32
CCDC12-209ENST00000604164 CXCL10P02778 98 aa13.08□□□□□ -0.32
CCDC12-209ENST00000604164 PSAPP07602 524 aa13.08□□□□□ -0.32
CCDC12-209ENST00000604164 RSPH10BP0C881 870 aa13.08□□□□□ -0.32
CCDC12-209ENST00000604164 GCFC2P16383 781 aaKnown RBP13.08□□□□□ -0.32
CCDC12-209ENST00000604164 MARK3P27448 753 aa13.08□□□□□ -0.32
CCDC12-209ENST00000604164 SFNP31947 248 aa13.08□□□□□ -0.32
CCDC12-209ENST00000604164 KCNJ6P48051 423 aa13.08□□□□□ -0.32
CCDC12-209ENST00000604164 ZNF200P98182 395 aaPredicted RBP13.08□□□□□ -0.32
CCDC12-209ENST00000604164 RABEP1Q15276 862 aa13.08□□□□□ -0.32
CCDC12-209ENST00000604164 GRIK4Q16099 956 aa13.08□□□□□ -0.32
CCDC12-209ENST00000604164 TRIM71Q2Q1W2 868 aaKnown RBP13.08□□□□□ -0.32
CCDC12-209ENST00000604164 Q4G0T1 1027 aa13.08□□□□□ -0.32
CCDC12-209ENST00000604164 ZNF618Q5T7W0 954 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms