RNA–Protein interactions for RNA: ENST00000602959.5

UBE2E3-213, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UBE2E3, Length 909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-213ENST00000602959 RBL2Q08999 1139 aa27.53■■■□□ 2
UBE2E3-213ENST00000602959 ST3GAL1Q11201 340 aa27.53■■■□□ 2
UBE2E3-213ENST00000602959 BFSP2Q13515 415 aa27.53■■■□□ 2
UBE2E3-213ENST00000602959 PSRC1Q6PGN9 363 aaPredicted RBP27.53■■■□□ 2
UBE2E3-213ENST00000602959 BUD13Q9BRD0 619 aaKnown RBP eCLIP27.53■■■□□ 2
UBE2E3-213ENST00000602959 KCNJ14Q9UNX9 436 aa27.53■■■□□ 2
UBE2E3-213ENST00000602959 KAT6AQ92794 2004 aa27.53■■■□□ 2
UBE2E3-213ENST00000602959 EDIL3O43854 480 aa27.52■■■□□ 2
UBE2E3-213ENST00000602959 DTNBO60941 627 aa27.52■■■□□ 2
UBE2E3-213ENST00000602959 SMIM10L2AP0DMW4 78 aa27.52■■■□□ 2
UBE2E3-213ENST00000602959 SMIM10L2BP0DMW5 78 aa27.52■■■□□ 2
UBE2E3-213ENST00000602959 USP11P51784 963 aa27.52■■■□□ 2
UBE2E3-213ENST00000602959 HIC1Q14526 733 aa27.52■■■□□ 2
UBE2E3-213ENST00000602959 TMEM240Q5SV17 173 aa27.52■■■□□ 2
UBE2E3-213ENST00000602959 CCDC155Q8N6L0 562 aa27.52■■■□□ 2
UBE2E3-213ENST00000602959 DHX38Q92620 1227 aaKnown RBP27.52■■■□□ 2
UBE2E3-213ENST00000602959 LENG9Q96B70 501 aa27.52■■■□□ 2
UBE2E3-213ENST00000602959 LRCH3Q96II8 777 aa27.52■■■□□ 2
UBE2E3-213ENST00000602959 UPF2Q9HAU5 1272 aaKnown RBP27.52■■■□□ 2
UBE2E3-213ENST00000602959 LGR5O75473 907 aa27.51■■□□□ 1.99
UBE2E3-213ENST00000602959 PTK7Q13308 1070 aa27.51■■□□□ 1.99
UBE2E3-213ENST00000602959 TBCKQ8TEA7 893 aa27.51■■□□□ 1.99
UBE2E3-213ENST00000602959 SCLYQ96I15 445 aa27.51■■□□□ 1.99
UBE2E3-213ENST00000602959 RNPC3Q96LT9 517 aaKnown RBP27.51■■□□□ 1.99
UBE2E3-213ENST00000602959 C17orf102A2RUQ5 167 aa27.5■■□□□ 1.99
UBE2E3-213ENST00000602959 IPO5O00410 1097 aaKnown RBP27.5■■□□□ 1.99
UBE2E3-213ENST00000602959 DHX15O43143 795 aaKnown RBP27.5■■□□□ 1.99
UBE2E3-213ENST00000602959 SLC34A2O95436 690 aa27.5■■□□□ 1.99
UBE2E3-213ENST00000602959 ACTR2P61160 394 aa27.5■■□□□ 1.99
UBE2E3-213ENST00000602959 ZNF200P98182 395 aaPredicted RBP27.5■■□□□ 1.99
UBE2E3-213ENST00000602959 RABEP1Q15276 862 aa27.5■■□□□ 1.99
UBE2E3-213ENST00000602959 PRR16Q569H4 304 aa27.5■■□□□ 1.99
UBE2E3-213ENST00000602959 GPR153Q6NV75 609 aa27.5■■□□□ 1.99
UBE2E3-213ENST00000602959 RETREG2Q8NC44 543 aa27.5■■□□□ 1.99
UBE2E3-213ENST00000602959 AFAP1L1Q8TED9 768 aa27.5■■□□□ 1.99
UBE2E3-213ENST00000602959 RNPEPQ9H4A4 650 aa27.5■■□□□ 1.99
UBE2E3-213ENST00000602959 ERAP1Q9NZ08 941 aa27.5■■□□□ 1.99
UBE2E3-213ENST00000602959 ATG7O95352 703 aa27.49■■□□□ 1.99
UBE2E3-213ENST00000602959 ACRP10323 421 aa27.49■■□□□ 1.99
UBE2E3-213ENST00000602959 RFC2P35250 354 aa27.49■■□□□ 1.99
UBE2E3-213ENST00000602959 RASIP1Q5U651 963 aa27.49■■□□□ 1.99
UBE2E3-213ENST00000602959 ZNF365Q70YC5 407 aa27.49■■□□□ 1.99
UBE2E3-213ENST00000602959 KRT25Q7Z3Z0 450 aa27.49■■□□□ 1.99
UBE2E3-213ENST00000602959 SERINC5Q86VE9 423 aa27.49■■□□□ 1.99
UBE2E3-213ENST00000602959 RPUSD2Q8IZ73 545 aaKnown RBP27.49■■□□□ 1.99
UBE2E3-213ENST00000602959 VWCEQ96DN2 955 aa27.49■■□□□ 1.99
UBE2E3-213ENST00000602959 PCYT2Q99447 389 aa27.49■■□□□ 1.99
UBE2E3-213ENST00000602959 ZNF577Q9BSK1 485 aa27.49■■□□□ 1.99
UBE2E3-213ENST00000602959 SMARCAD1Q9H4L7 1026 aa27.49■■□□□ 1.99
UBE2E3-213ENST00000602959 GJB4Q9NTQ9 266 aa27.49■■□□□ 1.99
UBE2E3-213ENST00000602959 TBC1D22BQ9NU19 505 aa27.49■■□□□ 1.99
UBE2E3-213ENST00000602959 JAK2O60674 1132 aa27.48■■□□□ 1.99
UBE2E3-213ENST00000602959 CCNE2O96020 404 aa27.48■■□□□ 1.99
UBE2E3-213ENST00000602959 PFKMP08237 780 aa27.48■■□□□ 1.99
UBE2E3-213ENST00000602959 IQCF3P0C7M6 154 aa27.48■■□□□ 1.99
UBE2E3-213ENST00000602959 NONOQ15233 471 aaKnown RBP eCLIP27.48■■□□□ 1.99
UBE2E3-213ENST00000602959 TRIM71Q2Q1W2 868 aaKnown RBP27.48■■□□□ 1.99
UBE2E3-213ENST00000602959 GLG1Q92896 1179 aa27.48■■□□□ 1.99
UBE2E3-213ENST00000602959 ZSCAN31Q96LW9 406 aaPredicted RBP27.48■■□□□ 1.99
UBE2E3-213ENST00000602959 GNAT1P11488 350 aa27.47■■□□□ 1.99
UBE2E3-213ENST00000602959 MOXD1Q6UVY6 613 aa27.47■■□□□ 1.99
UBE2E3-213ENST00000602959 IL27Q8NEV9 243 aa27.47■■□□□ 1.99
UBE2E3-213ENST00000602959 ATP6V0A1Q93050 837 aa27.47■■□□□ 1.99
UBE2E3-213ENST00000602959 SH2B1Q9NRF2 756 aaPredicted RBP27.47■■□□□ 1.99
UBE2E3-213ENST00000602959 NRCAMQ92823 1304 aa27.46■■□□□ 1.99
UBE2E3-213ENST00000602959 TET1Q8NFU7 2136 aa27.46■■□□□ 1.99
UBE2E3-213ENST00000602959 CYP3A7-CYP3A51PA0A087WV96 503 aa27.46■■□□□ 1.99
UBE2E3-213ENST00000602959 DDX39AO00148 427 aaKnown RBP27.46■■□□□ 1.99
UBE2E3-213ENST00000602959 CKBP12277 381 aa27.46■■□□□ 1.99
UBE2E3-213ENST00000602959 SELPP16109 830 aa27.46■■□□□ 1.99
UBE2E3-213ENST00000602959 CYP3A7P24462 503 aa27.46■■□□□ 1.99
UBE2E3-213ENST00000602959 ADAM17P78536 824 aa27.46■■□□□ 1.99
UBE2E3-213ENST00000602959 CCDC83Q8IWF9 413 aa27.46■■□□□ 1.99
UBE2E3-213ENST00000602959 LMBR1Q8WVP7 490 aa27.46■■□□□ 1.99
UBE2E3-213ENST00000602959 HERVK_113Q902F9 699 aa27.46■■□□□ 1.99
UBE2E3-213ENST00000602959 WNT8BQ93098 351 aa27.46■■□□□ 1.99
UBE2E3-213ENST00000602959 AZI2Q9H6S1 392 aa27.46■■□□□ 1.99
UBE2E3-213ENST00000602959 SETD4Q9NVD3 440 aa27.46■■□□□ 1.99
UBE2E3-213ENST00000602959 WDR81Q562E7 1941 aa27.45■■□□□ 1.99
UBE2E3-213ENST00000602959 IGKV6D-21A0A0A0MT36 114 aa27.45■■□□□ 1.98
UBE2E3-213ENST00000602959 TREHO43280 583 aa27.45■■□□□ 1.98
UBE2E3-213ENST00000602959 FGBP02675 491 aa27.45■■□□□ 1.98
UBE2E3-213ENST00000602959 Q4G0T1 1027 aa27.45■■□□□ 1.98
UBE2E3-213ENST00000602959 ZNF746Q6NUN9 644 aaPredicted RBP27.45■■□□□ 1.98
UBE2E3-213ENST00000602959 ABHD15Q6UXT9 468 aa27.45■■□□□ 1.98
UBE2E3-213ENST00000602959 LRRC8DQ7L1W4 858 aa27.45■■□□□ 1.98
UBE2E3-213ENST00000602959 PLPPR4Q7Z2D5 763 aa27.45■■□□□ 1.98
UBE2E3-213ENST00000602959 OXER1Q8TDS5 423 aa27.45■■□□□ 1.98
UBE2E3-213ENST00000602959 MBOAT7Q96N66 472 aa27.45■■□□□ 1.98
UBE2E3-213ENST00000602959 LLPHQ9BRT6 129 aaKnown RBP27.45■■□□□ 1.98
UBE2E3-213ENST00000602959 CCDC194A0A1B0GVG4 234 aa27.44■■□□□ 1.98
UBE2E3-213ENST00000602959 MSH4O15457 936 aa27.44■■□□□ 1.98
UBE2E3-213ENST00000602959 PARNO95453 639 aaKnown RBP27.44■■□□□ 1.98
UBE2E3-213ENST00000602959 MARK3P27448 753 aa27.44■■□□□ 1.98
UBE2E3-213ENST00000602959 SMAD3P84022 425 aaKnown RBP27.44■■□□□ 1.98
UBE2E3-213ENST00000602959 INF2Q27J81 1249 aa27.44■■□□□ 1.98
UBE2E3-213ENST00000602959 TBC1D32Q96NH3 1257 aa27.44■■□□□ 1.98
UBE2E3-213ENST00000602959 MYH9P35579 1960 aaKnown RBP27.44■■□□□ 1.98
UBE2E3-213ENST00000602959 TDP2O95551 362 aa27.43■■□□□ 1.98
UBE2E3-213ENST00000602959 STAT5BP51692 787 aa27.43■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms