RNA–Protein interactions for RNA: ENST00000602088.7

SSBP4-213, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-213ENST00000602088 HIC1Q14526 733 aa19.01■□□□□ 0.63
SSBP4-213ENST00000602088 SHHQ15465 462 aa19.01■□□□□ 0.63
SSBP4-213ENST00000602088 LRIT3Q3SXY7 679 aa19.01■□□□□ 0.63
SSBP4-213ENST00000602088 C9orf50Q5SZB4 431 aa19.01■□□□□ 0.63
SSBP4-213ENST00000602088 KRT25Q7Z3Z0 450 aa19.01■□□□□ 0.63
SSBP4-213ENST00000602088 CCDC83Q8IWF9 413 aa19.01■□□□□ 0.63
SSBP4-213ENST00000602088 LENG9Q96B70 501 aa19.01■□□□□ 0.63
SSBP4-213ENST00000602088 ZNF577Q9BSK1 485 aa19.01■□□□□ 0.63
SSBP4-213ENST00000602088 WNT8AQ9H1J5 351 aa19.01■□□□□ 0.63
SSBP4-213ENST00000602088 SH2B1Q9NRF2 756 aaPredicted RBP19.01■□□□□ 0.63
SSBP4-213ENST00000602088 ZNF215Q9UL58 517 aaPredicted RBP19.01■□□□□ 0.63
SSBP4-213ENST00000602088 HOXC8P31273 242 aa19■□□□□ 0.63
SSBP4-213ENST00000602088 ACTR2P61160 394 aa19■□□□□ 0.63
SSBP4-213ENST00000602088 NONOQ15233 471 aaKnown RBP eCLIP19■□□□□ 0.632e-6■■■■□ 19.9
SSBP4-213ENST00000602088 PRR16Q569H4 304 aa19■□□□□ 0.63
SSBP4-213ENST00000602088 C16orf59Q7L2K0 433 aa19■□□□□ 0.63
SSBP4-213ENST00000602088 OXER1Q8TDS5 423 aa19■□□□□ 0.63
SSBP4-213ENST00000602088 LLPHQ9BRT6 129 aaKnown RBP19■□□□□ 0.63
SSBP4-213ENST00000602088 BACH2Q9BYV9 841 aa19■□□□□ 0.63
SSBP4-213ENST00000602088 RNPEPQ9H4A4 650 aa19■□□□□ 0.63
SSBP4-213ENST00000602088 CYP3A7-CYP3A51PA0A087WV96 503 aa18.99■□□□□ 0.63
SSBP4-213ENST00000602088 C17orf102A2RUQ5 167 aa18.99■□□□□ 0.63
SSBP4-213ENST00000602088 PITPNM1O00562 1244 aa18.99■□□□□ 0.63
SSBP4-213ENST00000602088 ST18O60284 1047 aa18.99■□□□□ 0.63
SSBP4-213ENST00000602088 LGR5O75473 907 aa18.99■□□□□ 0.63
SSBP4-213ENST00000602088 ATG7O95352 703 aa18.99■□□□□ 0.63
SSBP4-213ENST00000602088 CCNE2O96020 404 aa18.99■□□□□ 0.63
SSBP4-213ENST00000602088 SMIM10L2AP0DMW4 78 aa18.99■□□□□ 0.63
SSBP4-213ENST00000602088 SMIM10L2BP0DMW5 78 aa18.99■□□□□ 0.63
SSBP4-213ENST00000602088 CYP3A7P24462 503 aa18.99■□□□□ 0.63
SSBP4-213ENST00000602088 ZNF200P98182 395 aaPredicted RBP18.99■□□□□ 0.63
SSBP4-213ENST00000602088 BFSP2Q13515 415 aa18.99■□□□□ 0.63
SSBP4-213ENST00000602088 UIMC1Q96RL1 719 aa18.99■□□□□ 0.63
SSBP4-213ENST00000602088 PCYT2Q99447 389 aa18.99■□□□□ 0.63
SSBP4-213ENST00000602088 SMARCAD1Q9H4L7 1026 aa18.99■□□□□ 0.63
SSBP4-213ENST00000602088 TBC1D22BQ9NU19 505 aa18.99■□□□□ 0.63
SSBP4-213ENST00000602088 TRIP12Q14669 1992 aaPredicted RBP18.99■□□□□ 0.63
SSBP4-213ENST00000602088 EMSYQ7Z589 1322 aa18.99■□□□□ 0.63
SSBP4-213ENST00000602088 CCDC194A0A1B0GVG4 234 aa18.98■□□□□ 0.63
SSBP4-213ENST00000602088 SOX1O00570 391 aaPredicted RBP18.98■□□□□ 0.63
SSBP4-213ENST00000602088 RBL2Q08999 1139 aa18.98■□□□□ 0.63
SSBP4-213ENST00000602088 PTK7Q13308 1070 aa18.98■□□□□ 0.63
SSBP4-213ENST00000602088 INF2Q27J81 1249 aa18.98■□□□□ 0.63
SSBP4-213ENST00000602088 Q4G0T1 1027 aa18.98■□□□□ 0.63
SSBP4-213ENST00000602088 CAGE1Q8TC20 777 aa18.98■□□□□ 0.63
SSBP4-213ENST00000602088 DHX38Q92620 1227 aaKnown RBP18.98■□□□□ 0.63
SSBP4-213ENST00000602088 GLG1Q92896 1179 aa18.98■□□□□ 0.63
SSBP4-213ENST00000602088 SCLYQ96I15 445 aa18.98■□□□□ 0.63
SSBP4-213ENST00000602088 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.98■□□□□ 0.632e-9■□□□□ 11.2
SSBP4-213ENST00000602088 IL23AQ9NPF7 189 aa18.98■□□□□ 0.63
SSBP4-213ENST00000602088 SETD4Q9NVD3 440 aa18.98■□□□□ 0.63
SSBP4-213ENST00000602088 ERAP1Q9NZ08 941 aa18.98■□□□□ 0.63
SSBP4-213ENST00000602088 DDX39AO00148 427 aaKnown RBP18.97■□□□□ 0.63
SSBP4-213ENST00000602088 MSH4O15457 936 aa18.97■□□□□ 0.63
SSBP4-213ENST00000602088 ACRP10323 421 aa18.97■□□□□ 0.63
SSBP4-213ENST00000602088 TMEM240Q5SV17 173 aa18.97■□□□□ 0.63
SSBP4-213ENST00000602088 MOXD1Q6UVY6 613 aa18.97■□□□□ 0.63
SSBP4-213ENST00000602088 ABHD15Q6UXT9 468 aa18.97■□□□□ 0.63
SSBP4-213ENST00000602088 SERINC5Q86VE9 423 aa18.97■□□□□ 0.63
SSBP4-213ENST00000602088 CCDC155Q8N6L0 562 aa18.97■□□□□ 0.63
SSBP4-213ENST00000602088 RETREG2Q8NC44 543 aa18.97■□□□□ 0.63
SSBP4-213ENST00000602088 ATP6V0A1Q93050 837 aa18.97■□□□□ 0.63
SSBP4-213ENST00000602088 MBOAT7Q96N66 472 aa18.97■□□□□ 0.63
SSBP4-213ENST00000602088 SZT2Q5T011 3432 aa18.96■□□□□ 0.63
SSBP4-213ENST00000602088 IGKV6D-21A0A0A0MT36 114 aa18.96■□□□□ 0.63
SSBP4-213ENST00000602088 TDP2O95551 362 aa18.96■□□□□ 0.63
SSBP4-213ENST00000602088 MMP1P03956 469 aa18.96■□□□□ 0.63
SSBP4-213ENST00000602088 IQCF3P0C7M6 154 aa18.96■□□□□ 0.63
SSBP4-213ENST00000602088 KRT2P35908 639 aa18.96■□□□□ 0.63
SSBP4-213ENST00000602088 ADAM17P78536 824 aa18.96■□□□□ 0.63
SSBP4-213ENST00000602088 NR5A1Q13285 461 aa18.96■□□□□ 0.63
SSBP4-213ENST00000602088 TRIM29Q14134 588 aa18.96■□□□□ 0.63
SSBP4-213ENST00000602088 TRIM71Q2Q1W2 868 aaKnown RBP18.96■□□□□ 0.63
SSBP4-213ENST00000602088 KRT40Q6A162 431 aa18.96■□□□□ 0.63
SSBP4-213ENST00000602088 PLPPR4Q7Z2D5 763 aa18.96■□□□□ 0.63
SSBP4-213ENST00000602088 AFAP1L1Q8TED9 768 aa18.96■□□□□ 0.63
SSBP4-213ENST00000602088 SLC5A5Q92911 643 aa18.96■□□□□ 0.63
SSBP4-213ENST00000602088 TNFRSF25Q93038 417 aa18.96■□□□□ 0.63
SSBP4-213ENST00000602088 WNT8BQ93098 351 aa18.96■□□□□ 0.63
SSBP4-213ENST00000602088 VWCEQ96DN2 955 aa18.96■□□□□ 0.63
SSBP4-213ENST00000602088 RIT2Q99578 217 aa18.96■□□□□ 0.63
SSBP4-213ENST00000602088 AZI2Q9H6S1 392 aa18.96■□□□□ 0.63
SSBP4-213ENST00000602088 BRMS1Q9HCU9 246 aa18.96■□□□□ 0.63
SSBP4-213ENST00000602088 NRCAMQ92823 1304 aa18.96■□□□□ 0.63
SSBP4-213ENST00000602088 TREHO43280 583 aa18.95■□□□□ 0.62
SSBP4-213ENST00000602088 CD2BP2O95400 341 aaKnown RBP18.95■□□□□ 0.62
SSBP4-213ENST00000602088 GNAT1P11488 350 aa18.95■□□□□ 0.62
SSBP4-213ENST00000602088 CKBP12277 381 aa18.95■□□□□ 0.62
SSBP4-213ENST00000602088 MARK3P27448 753 aa18.95■□□□□ 0.62
SSBP4-213ENST00000602088 STAT5BP51692 787 aa18.95■□□□□ 0.62
SSBP4-213ENST00000602088 HMGN5P82970 282 aaKnown RBP18.95■□□□□ 0.62
SSBP4-213ENST00000602088 EARS2Q5JPH6 523 aaKnown RBP18.95■□□□□ 0.62
SSBP4-213ENST00000602088 PPP4R3AQ6IN85 833 aa18.95■□□□□ 0.62
SSBP4-213ENST00000602088 ZNF746Q6NUN9 644 aaPredicted RBP18.95■□□□□ 0.62
SSBP4-213ENST00000602088 PSRC1Q6PGN9 363 aaPredicted RBP18.95■□□□□ 0.62
SSBP4-213ENST00000602088 PIK3AP1Q6ZUJ8 805 aa18.95■□□□□ 0.62
SSBP4-213ENST00000602088 ZNF365Q70YC5 407 aa18.95■□□□□ 0.62
SSBP4-213ENST00000602088 NEK8Q86SG6 692 aa18.95■□□□□ 0.62
SSBP4-213ENST00000602088 RPUSD2Q8IZ73 545 aaKnown RBP18.95■□□□□ 0.62
SSBP4-213ENST00000602088 BTBD18B2RXH4 712 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms