RNA–Protein interactions for RNA: ENST00000601849.1

VRK3-224, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-224ENST00000601849 PSTPIP2Q9H939 334 aa11.02□□□□□ -0.65
VRK3-224ENST00000601849 ERAP1Q9NZ08 941 aa11.02□□□□□ -0.65
VRK3-224ENST00000601849 LAMA4Q16363 1823 aa11.02□□□□□ -0.65
VRK3-224ENST00000601849 TET1Q8NFU7 2136 aa11.02□□□□□ -0.65
VRK3-224ENST00000601849 NCOR1O75376 2440 aa11.01□□□□□ -0.65
VRK3-224ENST00000601849 GRXCR2A6NFK2 248 aa11.01□□□□□ -0.65
VRK3-224ENST00000601849 SPDYE3A6NKU9 549 aa11.01□□□□□ -0.65
VRK3-224ENST00000601849 PRR33A8MZF0 331 aa11.01□□□□□ -0.65
VRK3-224ENST00000601849 M0QZ92 97 aa11.01□□□□□ -0.65
VRK3-224ENST00000601849 CYTH3O43739 400 aa11.01□□□□□ -0.65
VRK3-224ENST00000601849 DDAH1O94760 285 aa11.01□□□□□ -0.65
VRK3-224ENST00000601849 HOXC8P31273 242 aa11.01□□□□□ -0.65
VRK3-224ENST00000601849 TCF7P36402 384 aaPredicted RBP11.01□□□□□ -0.65
VRK3-224ENST00000601849 HIC1Q14526 733 aa11.01□□□□□ -0.65
VRK3-224ENST00000601849 FAM26DQ5JW98 314 aa11.01□□□□□ -0.65
VRK3-224ENST00000601849 TTC22Q5TAA0 569 aa11.01□□□□□ -0.65
VRK3-224ENST00000601849 IER5Q5VY09 327 aa11.01□□□□□ -0.65
VRK3-224ENST00000601849 SYNE3Q6ZMZ3 975 aa11.01□□□□□ -0.65
VRK3-224ENST00000601849 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.01□□□□□ -0.65
VRK3-224ENST00000601849 EXOC6Q8TAG9 804 aa11.01□□□□□ -0.65
VRK3-224ENST00000601849 GPRASP2Q96D09 838 aa11.01□□□□□ -0.65
VRK3-224ENST00000601849 SPZ1Q9BXG8 430 aa11.01□□□□□ -0.65
VRK3-224ENST00000601849 LMAN2LQ9H0V9 348 aa11.01□□□□□ -0.65
VRK3-224ENST00000601849 SMARCAD1Q9H4L7 1026 aa11.01□□□□□ -0.65
VRK3-224ENST00000601849 AZI2Q9H6S1 392 aa11.01□□□□□ -0.65
VRK3-224ENST00000601849 RNF216Q9NWF9 866 aaPredicted RBP11.01□□□□□ -0.65
VRK3-224ENST00000601849 PRKAG3Q9UGI9 489 aa11.01□□□□□ -0.65
VRK3-224ENST00000601849 FRMPD4Q14CM0 1322 aa11.01□□□□□ -0.65
VRK3-224ENST00000601849 RRN3P2A6NIE6 340 aa11□□□□□ -0.65
VRK3-224ENST00000601849 CHMLP26374 656 aa11□□□□□ -0.65
VRK3-224ENST00000601849 MCM5P33992 734 aa11□□□□□ -0.65
VRK3-224ENST00000601849 CTNNB1P35222 781 aa11□□□□□ -0.65
VRK3-224ENST00000601849 PPFIA1Q13136 1202 aa11□□□□□ -0.65
VRK3-224ENST00000601849 MTMR1Q13613 665 aa11□□□□□ -0.65
VRK3-224ENST00000601849 USP17L6PQ6QN14 398 aa11□□□□□ -0.65
VRK3-224ENST00000601849 FAM43BQ6ZT52 329 aaPredicted RBP11□□□□□ -0.65
VRK3-224ENST00000601849 RPAINQ86UA6 219 aa11□□□□□ -0.65
VRK3-224ENST00000601849 ZNF654Q8IZM8 581 aa11□□□□□ -0.65
VRK3-224ENST00000601849 NEK9Q8TD19 979 aa11□□□□□ -0.65
VRK3-224ENST00000601849 LMBR1Q8WVP7 490 aa11□□□□□ -0.65
VRK3-224ENST00000601849 TMEM87BQ96K49 555 aa11□□□□□ -0.65
VRK3-224ENST00000601849 YTHDC1Q96MU7 727 aaKnown RBP11□□□□□ -0.65
VRK3-224ENST00000601849 UIMC1Q96RL1 719 aa11□□□□□ -0.65
VRK3-224ENST00000601849 POP1Q99575 1024 aaKnown RBP11□□□□□ -0.65
VRK3-224ENST00000601849 FTHL17Q9BXU8 183 aa11□□□□□ -0.65
VRK3-224ENST00000601849 CLDND1Q9NY35 253 aa11□□□□□ -0.65
VRK3-224ENST00000601849 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.99□□□□□ -0.65
VRK3-224ENST00000601849 H3BQ06 376 aaPredicted RBP10.99□□□□□ -0.65
VRK3-224ENST00000601849 STAG3L1P0CL83 205 aa10.99□□□□□ -0.65
VRK3-224ENST00000601849 IL9P15248 144 aa10.99□□□□□ -0.65
VRK3-224ENST00000601849 BMPR1AP36894 532 aa10.99□□□□□ -0.65
VRK3-224ENST00000601849 PTH1RQ03431 593 aa10.99□□□□□ -0.65
VRK3-224ENST00000601849 MKRN4PQ13434 485 aaPredicted RBP10.99□□□□□ -0.65
VRK3-224ENST00000601849 BTG3Q14201 252 aaPredicted RBP10.99□□□□□ -0.65
VRK3-224ENST00000601849 TCEAL5Q5H9L2 206 aa10.99□□□□□ -0.65
VRK3-224ENST00000601849 IGDCC4Q8TDY8 1250 aa10.99□□□□□ -0.65
VRK3-224ENST00000601849 MAP4K1Q92918 833 aa10.99□□□□□ -0.65
VRK3-224ENST00000601849 PLVAPQ9BX97 442 aa10.99□□□□□ -0.65
VRK3-224ENST00000601849 BCAS3Q9H6U6 928 aa10.99□□□□□ -0.65
VRK3-224ENST00000601849 TUBE1Q9UJT0 475 aa10.99□□□□□ -0.65
VRK3-224ENST00000601849 C5orf67F2Z3F1 127 aa10.98□□□□□ -0.65
VRK3-224ENST00000601849 ENPP3O14638 875 aa10.98□□□□□ -0.65
VRK3-224ENST00000601849 MEIS2O14770 477 aa10.98□□□□□ -0.65
VRK3-224ENST00000601849 SGSM2O43147 1006 aa10.98□□□□□ -0.65
VRK3-224ENST00000601849 DCXO43602 365 aa10.98□□□□□ -0.65
VRK3-224ENST00000601849 PRC1O43663 620 aa10.98□□□□□ -0.65
VRK3-224ENST00000601849 CHRNA1P02708 482 aa10.98□□□□□ -0.65
VRK3-224ENST00000601849 GHRP10912 638 aa10.98□□□□□ -0.65
VRK3-224ENST00000601849 ADAM17P78536 824 aa10.98□□□□□ -0.65
VRK3-224ENST00000601849 GRIK4Q16099 956 aa10.98□□□□□ -0.65
VRK3-224ENST00000601849 NAALADL2Q58DX5 795 aa10.98□□□□□ -0.65
VRK3-224ENST00000601849 ODR4Q5SWX8 454 aa10.98□□□□□ -0.65
VRK3-224ENST00000601849 TRIM50Q86XT4 487 aa10.98□□□□□ -0.65
VRK3-224ENST00000601849 TEX2Q8IWB9 1127 aa10.98□□□□□ -0.65
VRK3-224ENST00000601849 SDF4Q9BRK5 362 aa10.98□□□□□ -0.65
VRK3-224ENST00000601849 SLC12A7Q9Y666 1083 aa10.98□□□□□ -0.65
VRK3-224ENST00000601849 SQORQ9Y6N5 450 aa10.98□□□□□ -0.65
VRK3-224ENST00000601849 SIP14410 1827 aa10.98□□□□□ -0.65
VRK3-224ENST00000601849 FAM86C2PA6NEL3 165 aa10.97□□□□□ -0.65
VRK3-224ENST00000601849 GSPT1P15170 499 aaKnown RBP10.97□□□□□ -0.65
VRK3-224ENST00000601849 MARK3P27448 753 aa10.97□□□□□ -0.65
VRK3-224ENST00000601849 HOXD11P31277 338 aaPredicted RBP10.97□□□□□ -0.65
VRK3-224ENST00000601849 LIFRP42702 1097 aa10.97□□□□□ -0.65
VRK3-224ENST00000601849 IGBP1P78318 339 aa10.97□□□□□ -0.65
VRK3-224ENST00000601849 SEMA3FQ13275 785 aa10.97□□□□□ -0.65
VRK3-224ENST00000601849 TSHZ1Q6ZSZ6 1077 aa10.97□□□□□ -0.65
VRK3-224ENST00000601849 ADHFE1Q8IWW8 467 aa10.97□□□□□ -0.65
VRK3-224ENST00000601849 NME8Q8N427 588 aa10.97□□□□□ -0.65
VRK3-224ENST00000601849 DNAJB3Q8WWF6 145 aa10.97□□□□□ -0.65
VRK3-224ENST00000601849 IL25Q9H293 177 aa10.97□□□□□ -0.65
VRK3-224ENST00000601849 LY9Q9HBG7 655 aa10.97□□□□□ -0.65
VRK3-224ENST00000601849 SENP2Q9HC62 589 aa10.97□□□□□ -0.65
VRK3-224ENST00000601849 CD320Q9NPF0 282 aa10.97□□□□□ -0.65
VRK3-224ENST00000601849 JADE2Q9NQC1 790 aa10.97□□□□□ -0.65
VRK3-224ENST00000601849 LRFN2Q9ULH4 789 aa10.97□□□□□ -0.65
VRK3-224ENST00000601849 PCDHA6Q9UN73 950 aa10.97□□□□□ -0.65
VRK3-224ENST00000601849 PCDHA8Q9Y5H6 950 aa10.97□□□□□ -0.65
VRK3-224ENST00000601849 RBM8AQ9Y5S9 174 aaKnown RBP10.97□□□□□ -0.65
VRK3-224ENST00000601849 ADGRA3Q8IWK6 1321 aa10.97□□□□□ -0.65
VRK3-224ENST00000601849 COL4A4P53420 1690 aaPredicted RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms