RNA–Protein interactions for RNA: ENST00000601685.1

CAPN12-211, Transcript of calpain 12, human

Gene CAPN12, Length 2,552 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN12-211	ENST00000601685	NEDD9	Q14511	834 aa		18.2	■□□□□ 0.5
CAPN12-211	ENST00000601685	CALCRL	Q16602	461 aa		18.2	■□□□□ 0.5
CAPN12-211	ENST00000601685	WLS	Q5T9L3	541 aa		18.2	■□□□□ 0.5
CAPN12-211	ENST00000601685	ACTRT1	Q8TDG2	376 aa		18.2	■□□□□ 0.5
CAPN12-211	ENST00000601685	TRAF5	O00463	557 aa		18.2	■□□□□ 0.5
CAPN12-211	ENST00000601685	PAEP	P09466	180 aa		18.2	■□□□□ 0.5
CAPN12-211	ENST00000601685	USP11	P51784	963 aa		18.2	■□□□□ 0.5
CAPN12-211	ENST00000601685	RPS8	P62241	208 aa	Known RBP	18.2	■□□□□ 0.5
CAPN12-211	ENST00000601685	QPCT	Q16769	361 aa		18.2	■□□□□ 0.5
CAPN12-211	ENST00000601685	SOGA3	Q5TF21	947 aa		18.2	■□□□□ 0.5
CAPN12-211	ENST00000601685	NEUROG2	Q9H2A3	272 aa		18.2	■□□□□ 0.5
CAPN12-211	ENST00000601685	DONSON	Q9NYP3	566 aa		18.2	■□□□□ 0.5
CAPN12-211	ENST00000601685	ROBO3	Q96MS0	1386 aa		18.2	■□□□□ 0.5
CAPN12-211	ENST00000601685	COL16A1	Q07092	1604 aa	Predicted RBP	18.19	■□□□□ 0.5
CAPN12-211	ENST00000601685	DNM1L	O00429	736 aa		18.19	■□□□□ 0.5
CAPN12-211	ENST00000601685	PPP2R2A	P63151	447 aa		18.19	■□□□□ 0.5
CAPN12-211	ENST00000601685	ASIC2	Q16515	512 aa		18.19	■□□□□ 0.5
CAPN12-211	ENST00000601685	TMEM266	Q2M3C6	531 aa		18.19	■□□□□ 0.5
CAPN12-211	ENST00000601685	ANKRD20A8P	Q5CZ79	823 aa		18.19	■□□□□ 0.5
CAPN12-211	ENST00000601685	DDX42	Q86XP3	938 aa	Known RBP eCLIP	18.19	■□□□□ 0.5
CAPN12-211	ENST00000601685	TEX2	Q8IWB9	1127 aa		18.19	■□□□□ 0.5
CAPN12-211	ENST00000601685	GIMAP7	Q8NHV1	300 aa		18.19	■□□□□ 0.5
CAPN12-211	ENST00000601685	CALR3	Q96L12	384 aa	Known RBP	18.19	■□□□□ 0.5
CAPN12-211	ENST00000601685	CEP63	Q96MT8	703 aa		18.19	■□□□□ 0.5
CAPN12-211	ENST00000601685	CDCA7	Q9BWT1	371 aa	Predicted RBP	18.19	■□□□□ 0.5
CAPN12-211	ENST00000601685	BIN2	Q9UBW5	565 aa	Predicted RBP	18.19	■□□□□ 0.5
CAPN12-211	ENST00000601685	STX8	Q9UNK0	236 aa		18.19	■□□□□ 0.5
CAPN12-211	ENST00000601685	TMOD1	P28289	359 aa		18.19	■□□□□ 0.5
CAPN12-211	ENST00000601685	ARID5A	Q03989	594 aa		18.19	■□□□□ 0.5
CAPN12-211	ENST00000601685	SPRED3	Q2MJR0	410 aa		18.19	■□□□□ 0.5
CAPN12-211	ENST00000601685	ZNF444	Q8N0Y2	327 aa	Predicted RBP	18.19	■□□□□ 0.5
CAPN12-211	ENST00000601685	FAM133A	Q8N9E0	248 aa		18.19	■□□□□ 0.5
CAPN12-211	ENST00000601685	SEC16B	Q96JE7	1060 aa		18.19	■□□□□ 0.5
CAPN12-211	ENST00000601685	NUDT12	Q9BQG2	462 aa		18.19	■□□□□ 0.5
CAPN12-211	ENST00000601685	LEMD3	Q9Y2U8	911 aa		18.19	■□□□□ 0.5
CAPN12-211	ENST00000601685	SPATA31A1	Q5TZJ5	1347 aa		18.19	■□□□□ 0.5
CAPN12-211	ENST00000601685	MAST2	Q6P0Q8	1798 aa		18.19	■□□□□ 0.5
CAPN12-211	ENST00000601685	CEP104	O60308	925 aa		18.18	■□□□□ 0.5
CAPN12-211	ENST00000601685	MARS	P56192	900 aa	Known RBP	18.18	■□□□□ 0.5
CAPN12-211	ENST00000601685	COASY	Q13057	564 aa		18.18	■□□□□ 0.5
CAPN12-211	ENST00000601685	MTMR3	Q13615	1198 aa		18.18	■□□□□ 0.5
CAPN12-211	ENST00000601685	TMEM119	Q4V9L6	283 aa		18.18	■□□□□ 0.5
CAPN12-211	ENST00000601685	C10orf76	Q5T2E6	689 aa		18.18	■□□□□ 0.5
CAPN12-211	ENST00000601685	TBC1D9B	Q66K14	1250 aa		18.18	■□□□□ 0.5
CAPN12-211	ENST00000601685	CYB5D1	Q6P9G0	228 aa		18.18	■□□□□ 0.5
CAPN12-211	ENST00000601685	KCNK18	Q7Z418	384 aa		18.18	■□□□□ 0.5
CAPN12-211	ENST00000601685	TXNRD3	Q86VQ6	643 aa		18.18	■□□□□ 0.5
CAPN12-211	ENST00000601685	TRIM59	Q8IWR1	403 aa		18.18	■□□□□ 0.5
CAPN12-211	ENST00000601685	FUK	Q8N0W3	1084 aa		18.18	■□□□□ 0.5
CAPN12-211	ENST00000601685	REXO1	Q8N1G1	1221 aa	Known RBP	18.18	■□□□□ 0.5
CAPN12-211	ENST00000601685	CNOT8	Q9UFF9	292 aa	Known RBP	18.18	■□□□□ 0.5
CAPN12-211	ENST00000601685	FBXL5	Q9UKA1	691 aa		18.18	■□□□□ 0.5
CAPN12-211	ENST00000601685	GNA14	O95837	355 aa		18.18	■□□□□ 0.5
CAPN12-211	ENST00000601685	BYSL	Q13895	437 aa	Known RBP	18.18	■□□□□ 0.5
CAPN12-211	ENST00000601685	PDIA5	Q14554	519 aa		18.18	■□□□□ 0.5
CAPN12-211	ENST00000601685	SNCB	Q16143	134 aa		18.18	■□□□□ 0.5
CAPN12-211	ENST00000601685	ARMC9	Q7Z3E5	817 aa		18.18	■□□□□ 0.5
CAPN12-211	ENST00000601685	DZIP1	Q86YF9	867 aa	Known RBP	18.18	■□□□□ 0.5
CAPN12-211	ENST00000601685	PARP9	Q8IXQ6	854 aa		18.18	■□□□□ 0.5
CAPN12-211	ENST00000601685	CCDC24	Q8N4L8	307 aa		18.18	■□□□□ 0.5
CAPN12-211	ENST00000601685	SNX29	Q8TEQ0	813 aa		18.18	■□□□□ 0.5
CAPN12-211	ENST00000601685	RAPGEF5	Q92565	580 aa		18.18	■□□□□ 0.5
CAPN12-211	ENST00000601685	GAN	Q9H2C0	597 aa		18.18	■□□□□ 0.5
CAPN12-211	ENST00000601685	TMEM260	Q9NX78	707 aa		18.18	■□□□□ 0.5
CAPN12-211	ENST00000601685	BCCIP	Q9P287	314 aa	Known RBP eCLIP	18.18	■□□□□ 0.5
CAPN12-211	ENST00000601685	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	18.18	■□□□□ 0.5
CAPN12-211	ENST00000601685	POTEM	A6NI47	508 aa		18.17	■□□□□ 0.5
CAPN12-211	ENST00000601685	SART1	O43290	800 aa	Known RBP	18.17	■□□□□ 0.5
CAPN12-211	ENST00000601685	CHRM1	P11229	460 aa	Predicted RBP	18.17	■□□□□ 0.5
CAPN12-211	ENST00000601685	ENOX2	Q16206	610 aa	Known RBP	18.17	■□□□□ 0.5
CAPN12-211	ENST00000601685	LACTB2	Q53H82	288 aa	Predicted RBP	18.17	■□□□□ 0.5
CAPN12-211	ENST00000601685	CCDC50	Q8IVM0	306 aa		18.17	■□□□□ 0.5
CAPN12-211	ENST00000601685	DNAJC19	Q96DA6	116 aa		18.17	■□□□□ 0.5
CAPN12-211	ENST00000601685	RAB34	Q9BZG1	259 aa		18.17	■□□□□ 0.5
CAPN12-211	ENST00000601685	CCDC88A	Q3V6T2	1871 aa		18.17	■□□□□ 0.5
CAPN12-211	ENST00000601685	SLC37A4	O43826	429 aa		18.17	■□□□□ 0.5
CAPN12-211	ENST00000601685	ZBTB48	P10074	688 aa	Predicted RBP	18.17	■□□□□ 0.5
CAPN12-211	ENST00000601685	IFI16	Q16666	785 aa	Known RBP	18.17	■□□□□ 0.5
CAPN12-211	ENST00000601685	ODF2	Q5BJF6	829 aa		18.17	■□□□□ 0.5
CAPN12-211	ENST00000601685	KRT79	Q5XKE5	535 aa		18.17	■□□□□ 0.5
CAPN12-211	ENST00000601685	AEBP2	Q6ZN18	517 aa	Predicted RBP	18.17	■□□□□ 0.5
CAPN12-211	ENST00000601685	CACNA2D3	Q8IZS8	1091 aa		18.17	■□□□□ 0.5
CAPN12-211	ENST00000601685	LRRC57	Q8N9N7	239 aa		18.17	■□□□□ 0.5
CAPN12-211	ENST00000601685	LINC00116	Q8NCU8	138 aa		18.17	■□□□□ 0.5
CAPN12-211	ENST00000601685	UBLCP1	Q8WVY7	318 aa	Predicted RBP	18.17	■□□□□ 0.5
CAPN12-211	ENST00000601685	SGSM3	Q96HU1	749 aa		18.17	■□□□□ 0.5
CAPN12-211	ENST00000601685	NOVA2	Q9UNW9	492 aa	Known RBP	18.17	■□□□□ 0.5
CAPN12-211	ENST00000601685	ESYT2	A0FGR8	921 aa		18.16	■□□□□ 0.5
CAPN12-211	ENST00000601685	PGRMC1	O00264	195 aa	Known RBP	18.16	■□□□□ 0.5
CAPN12-211	ENST00000601685	KIF1C	O43896	1103 aa	Known RBP	18.16	■□□□□ 0.5
CAPN12-211	ENST00000601685	FLT3	P36888	993 aa		18.16	■□□□□ 0.5
CAPN12-211	ENST00000601685	PPARD	Q03181	441 aa		18.16	■□□□□ 0.5
CAPN12-211	ENST00000601685	SEPT2	Q15019	361 aa		18.16	■□□□□ 0.5
CAPN12-211	ENST00000601685	SLC44A5	Q8NCS7	719 aa		18.16	■□□□□ 0.5
CAPN12-211	ENST00000601685	MAGEC3	Q8TD91	643 aa		18.16	■□□□□ 0.5
CAPN12-211	ENST00000601685	TATDN2	Q93075	761 aa		18.16	■□□□□ 0.5
CAPN12-211	ENST00000601685	AP1M1	Q9BXS5	423 aa		18.16	■□□□□ 0.5
CAPN12-211	ENST00000601685	SEC63	Q9UGP8	760 aa	Known RBP	18.16	■□□□□ 0.5
CAPN12-211	ENST00000601685	CCDC188	H7C350	402 aa		18.16	■□□□□ 0.5
CAPN12-211	ENST00000601685	ELF1	P32519	619 aa		18.16	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 24 ms