RNA–Protein interactions for RNA: ENST00000600055.1

LIG1-219, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 602 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-219ENST00000600055 CCNE2O96020 404 aa17.27■□□□□ 0.36
LIG1-219ENST00000600055 MCM2P49736 904 aa17.27■□□□□ 0.36
LIG1-219ENST00000600055 ACTR2P61160 394 aa17.27■□□□□ 0.36
LIG1-219ENST00000600055 SETQ01105 290 aaPredicted RBP17.27■□□□□ 0.36
LIG1-219ENST00000600055 PTPN11Q06124 597 aaPredicted RBP17.27■□□□□ 0.36
LIG1-219ENST00000600055 HIC1Q14526 733 aa17.27■□□□□ 0.36
LIG1-219ENST00000600055 DIS3L2Q8IYB7 885 aaKnown RBP17.27■□□□□ 0.36
LIG1-219ENST00000600055 C7orf31Q8N865 590 aa17.27■□□□□ 0.36
LIG1-219ENST00000600055 GJA10Q969M2 543 aa17.27■□□□□ 0.36
LIG1-219ENST00000600055 C8orf76Q96K31 380 aa17.27■□□□□ 0.36
LIG1-219ENST00000600055 PCYT2Q99447 389 aa17.27■□□□□ 0.36
LIG1-219ENST00000600055 BRMS1Q9HCU9 246 aa17.27■□□□□ 0.36
LIG1-219ENST00000600055 CYP3A7-CYP3A51PA0A087WV96 503 aa17.26■□□□□ 0.35
LIG1-219ENST00000600055 TIMP1P01033 207 aa17.26■□□□□ 0.35
LIG1-219ENST00000600055 CYP3A7P24462 503 aa17.26■□□□□ 0.35
LIG1-219ENST00000600055 CYP2C18P33260 490 aa17.26■□□□□ 0.35
LIG1-219ENST00000600055 ZNF200P98182 395 aaPredicted RBP17.26■□□□□ 0.35
LIG1-219ENST00000600055 LETM2Q2VYF4 491 aa17.26■□□□□ 0.35
LIG1-219ENST00000600055 SESTD1Q86VW0 696 aa17.26■□□□□ 0.35
LIG1-219ENST00000600055 FAM184AQ8NB25 1140 aa17.26■□□□□ 0.35
LIG1-219ENST00000600055 CTAGE1Q96RT6 745 aa17.26■□□□□ 0.35
LIG1-219ENST00000600055 GTF2IRD1Q9UHL9 959 aa17.26■□□□□ 0.35
LIG1-219ENST00000600055 SUPT20HL2P0C7V6 817 aa17.25■□□□□ 0.35
LIG1-219ENST00000600055 MARK3P27448 753 aa17.25■□□□□ 0.35
LIG1-219ENST00000600055 PTGISQ16647 500 aa17.25■□□□□ 0.35
LIG1-219ENST00000600055 Q4G0T1 1027 aa17.25■□□□□ 0.35
LIG1-219ENST00000600055 NEK8Q86SG6 692 aa17.25■□□□□ 0.35
LIG1-219ENST00000600055 MBOAT7Q96N66 472 aa17.25■□□□□ 0.35
LIG1-219ENST00000600055 NOC4LQ9BVI4 516 aaKnown RBP17.25■□□□□ 0.35
LIG1-219ENST00000600055 UBE2OQ9C0C9 1292 aaKnown RBP17.25■□□□□ 0.35
LIG1-219ENST00000600055 HIPK3Q9H422 1215 aa17.25■□□□□ 0.35
LIG1-219ENST00000600055 RNPEPQ9H4A4 650 aa17.25■□□□□ 0.35
LIG1-219ENST00000600055 SLC37A4O43826 429 aa17.24■□□□□ 0.35
LIG1-219ENST00000600055 LGR5O75473 907 aa17.24■□□□□ 0.35
LIG1-219ENST00000600055 ATG7O95352 703 aa17.24■□□□□ 0.35
LIG1-219ENST00000600055 SMIM10L2AP0DMW4 78 aa17.24■□□□□ 0.35
LIG1-219ENST00000600055 SMIM10L2BP0DMW5 78 aa17.24■□□□□ 0.35
LIG1-219ENST00000600055 BMP8BP34820 402 aa17.24■□□□□ 0.35
LIG1-219ENST00000600055 EPHB4P54760 987 aa17.24■□□□□ 0.35
LIG1-219ENST00000600055 FBXO18Q8NFZ0 1043 aa17.24■□□□□ 0.35
LIG1-219ENST00000600055 GLG1Q92896 1179 aa17.24■□□□□ 0.35
LIG1-219ENST00000600055 TBC1D22BQ9NU19 505 aa17.24■□□□□ 0.35
LIG1-219ENST00000600055 DDX25Q9UHL0 483 aaKnown RBP17.24■□□□□ 0.35
LIG1-219ENST00000600055 ZNF215Q9UL58 517 aaPredicted RBP17.24■□□□□ 0.35
LIG1-219ENST00000600055 NOD1Q9Y239 953 aa17.24■□□□□ 0.35
LIG1-219ENST00000600055 LTBP2Q14767 1821 aa17.24■□□□□ 0.35
LIG1-219ENST00000600055 WNT7AO00755 349 aa17.23■□□□□ 0.35
LIG1-219ENST00000600055 CCNT1O60563 726 aaKnown RBP17.23■□□□□ 0.35
LIG1-219ENST00000600055 CCL23P55773 120 aa17.23■□□□□ 0.35
LIG1-219ENST00000600055 MFSD5Q6N075 450 aa17.23■□□□□ 0.35
LIG1-219ENST00000600055 MOXD1Q6UVY6 613 aa17.23■□□□□ 0.35
LIG1-219ENST00000600055 ABHD15Q6UXT9 468 aa17.23■□□□□ 0.35
LIG1-219ENST00000600055 DHX38Q92620 1227 aaKnown RBP17.23■□□□□ 0.35
LIG1-219ENST00000600055 SLC5A5Q92911 643 aa17.23■□□□□ 0.35
LIG1-219ENST00000600055 WNT8AQ9H1J5 351 aa17.23■□□□□ 0.35
LIG1-219ENST00000600055 SMARCAD1Q9H4L7 1026 aa17.23■□□□□ 0.35
LIG1-219ENST00000600055 SETD4Q9NVD3 440 aa17.23■□□□□ 0.35
LIG1-219ENST00000600055 EMSYQ7Z589 1322 aa17.22■□□□□ 0.35
LIG1-219ENST00000600055 C17orf102A2RUQ5 167 aa17.22■□□□□ 0.35
LIG1-219ENST00000600055 RBAK-RBAKDNI3L0D1 243 aa17.22■□□□□ 0.35
LIG1-219ENST00000600055 GJB2P29033 226 aa17.22■□□□□ 0.35
LIG1-219ENST00000600055 SAFBQ15424 915 aaKnown RBP eCLIP17.22■□□□□ 0.35
LIG1-219ENST00000600055 HABP4Q5JVS0 413 aaKnown RBP17.22■□□□□ 0.35
LIG1-219ENST00000600055 LRCH2Q5VUJ6 765 aa17.22■□□□□ 0.35
LIG1-219ENST00000600055 ETNPPLQ8TBG4 499 aa17.22■□□□□ 0.35
LIG1-219ENST00000600055 WNT8BQ93098 351 aa17.22■□□□□ 0.35
LIG1-219ENST00000600055 ERAP1Q9NZ08 941 aa17.22■□□□□ 0.35
LIG1-219ENST00000600055 IGKV6D-21A0A0A0MT36 114 aa17.21■□□□□ 0.35
LIG1-219ENST00000600055 KIF28PB7ZC32 967 aa17.21■□□□□ 0.35
LIG1-219ENST00000600055 BACH1O14867 736 aa17.21■□□□□ 0.35
LIG1-219ENST00000600055 TREHO43280 583 aa17.21■□□□□ 0.35
LIG1-219ENST00000600055 CHMP2AO43633 222 aa17.21■□□□□ 0.35
LIG1-219ENST00000600055 GAS7O60861 476 aa17.21■□□□□ 0.35
LIG1-219ENST00000600055 PSMD10O75832 226 aa17.21■□□□□ 0.35
LIG1-219ENST00000600055 CSF2RAP15509 400 aa17.21■□□□□ 0.35
LIG1-219ENST00000600055 HOXC8P31273 242 aa17.21■□□□□ 0.35
LIG1-219ENST00000600055 STAT5BP51692 787 aa17.21■□□□□ 0.35
LIG1-219ENST00000600055 FPGSQ05932 587 aa17.21■□□□□ 0.35
LIG1-219ENST00000600055 PPP4R3AQ6IN85 833 aa17.21■□□□□ 0.35
LIG1-219ENST00000600055 ZNF746Q6NUN9 644 aaPredicted RBP17.21■□□□□ 0.35
LIG1-219ENST00000600055 SWSAP1Q6NVH7 229 aa17.21■□□□□ 0.35
LIG1-219ENST00000600055 CCDC60Q8IWA6 550 aaPredicted RBP17.21■□□□□ 0.35
LIG1-219ENST00000600055 SCLYQ96I15 445 aa17.21■□□□□ 0.35
LIG1-219ENST00000600055 RIT2Q99578 217 aa17.21■□□□□ 0.35
LIG1-219ENST00000600055 TEKT3Q9BXF9 490 aa17.21■□□□□ 0.35
LIG1-219ENST00000600055 UNC45AQ9H3U1 944 aa17.21■□□□□ 0.35
LIG1-219ENST00000600055 AZI2Q9H6S1 392 aa17.21■□□□□ 0.35
LIG1-219ENST00000600055 CEP290O15078 2479 aa17.2■□□□□ 0.34
LIG1-219ENST00000600055 GCFC2P16383 781 aaKnown RBP17.2■□□□□ 0.34
LIG1-219ENST00000600055 ATP2B1P20020 1258 aa17.2■□□□□ 0.34
LIG1-219ENST00000600055 KRT76Q01546 638 aa17.2■□□□□ 0.34
LIG1-219ENST00000600055 CUL4AQ13619 759 aa17.2■□□□□ 0.34
LIG1-219ENST00000600055 PLCB4Q15147 1175 aa17.2■□□□□ 0.34
LIG1-219ENST00000600055 C9orf50Q5SZB4 431 aa17.2■□□□□ 0.34
LIG1-219ENST00000600055 MIS18BP1Q6P0N0 1132 aa17.2■□□□□ 0.34
LIG1-219ENST00000600055 PLPPR4Q7Z2D5 763 aa17.2■□□□□ 0.34
LIG1-219ENST00000600055 POTEDQ86YR6 584 aa17.2■□□□□ 0.34
LIG1-219ENST00000600055 TMEM199Q8N511 208 aa17.2■□□□□ 0.34
LIG1-219ENST00000600055 LMBR1Q8WVP7 490 aa17.2■□□□□ 0.34
LIG1-219ENST00000600055 ATP6V0A1Q93050 837 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms