RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 KCNA2P16389 499 aa21.46■■□□□ 1.03
PNKP-213ENST00000599543 ITGB5P18084 799 aa21.46■■□□□ 1.03
PNKP-213ENST00000599543 TCF7P36402 384 aaPredicted RBP21.46■■□□□ 1.03
PNKP-213ENST00000599543 KRT32Q14532 448 aa21.46■■□□□ 1.03
PNKP-213ENST00000599543 RTN1Q16799 776 aa21.46■■□□□ 1.03
PNKP-213ENST00000599543 FAM117BQ6P1L5 589 aa21.46■■□□□ 1.03
PNKP-213ENST00000599543 DHX32Q7L7V1 743 aaKnown RBP21.46■■□□□ 1.03
PNKP-213ENST00000599543 DBF4BQ8NFT6 615 aa21.46■■□□□ 1.03
PNKP-213ENST00000599543 LMBR1Q8WVP7 490 aa21.46■■□□□ 1.03
PNKP-213ENST00000599543 TCEANC2Q96MN5 208 aa21.46■■□□□ 1.03
PNKP-213ENST00000599543 PKD2L1Q9P0L9 805 aa21.46■■□□□ 1.03
PNKP-213ENST00000599543 PCDHA6Q9UN73 950 aa21.46■■□□□ 1.03
PNKP-213ENST00000599543 PCDHA8Q9Y5H6 950 aa21.46■■□□□ 1.03
PNKP-213ENST00000599543 ZBTB43O43298 467 aa21.45■■□□□ 1.02
PNKP-213ENST00000599543 ATP9AO75110 1047 aa21.45■■□□□ 1.02
PNKP-213ENST00000599543 NAPAP54920 295 aa21.45■■□□□ 1.02
PNKP-213ENST00000599543 PLEKHG4Q58EX7 1191 aa21.45■■□□□ 1.02
PNKP-213ENST00000599543 WWC2Q6AWC2 1192 aa21.45■■□□□ 1.02
PNKP-213ENST00000599543 SPRED2Q7Z698 418 aa21.45■■□□□ 1.02
PNKP-213ENST00000599543 RASEFQ8IZ41 740 aa21.45■■□□□ 1.02
PNKP-213ENST00000599543 BDP1A6H8Y1 2624 aa21.45■■□□□ 1.02
PNKP-213ENST00000599543 NRCAMQ92823 1304 aa21.45■■□□□ 1.02
PNKP-213ENST00000599543 EXOSC10Q01780 885 aaKnown RBP21.44■■□□□ 1.02
PNKP-213ENST00000599543 GRB10Q13322 594 aa21.44■■□□□ 1.02
PNKP-213ENST00000599543 TSGA10IPQ3SY00 556 aa21.44■■□□□ 1.02
PNKP-213ENST00000599543 KRT40Q6A162 431 aa21.44■■□□□ 1.02
PNKP-213ENST00000599543 PPP1R18Q6NYC8 613 aa21.44■■□□□ 1.02
PNKP-213ENST00000599543 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.44■■□□□ 1.02
PNKP-213ENST00000599543 MYOCDQ8IZQ8 938 aa21.44■■□□□ 1.02
PNKP-213ENST00000599543 SEPT8Q92599 483 aa21.44■■□□□ 1.02
PNKP-213ENST00000599543 MTUS1Q9ULD2 1270 aa21.44■■□□□ 1.02
PNKP-213ENST00000599543 BRPF3Q9ULD4 1205 aa21.44■■□□□ 1.02
PNKP-213ENST00000599543 UBIAD1Q9Y5Z9 338 aa21.44■■□□□ 1.02
PNKP-213ENST00000599543 TCF20Q9UGU0 1960 aaKnown RBP21.44■■□□□ 1.02
PNKP-213ENST00000599543 BRWD1Q9NSI6 2320 aa21.43■■□□□ 1.02
PNKP-213ENST00000599543 RBAK-RBAKDNI3L0D1 243 aa21.43■■□□□ 1.02
PNKP-213ENST00000599543 TNFRSF10AO00220 468 aa21.43■■□□□ 1.02
PNKP-213ENST00000599543 MAFGO15525 162 aa21.43■■□□□ 1.02
PNKP-213ENST00000599543 FGD1P98174 961 aa21.43■■□□□ 1.02
PNKP-213ENST00000599543 ADCK5Q3MIX3 580 aa21.43■■□□□ 1.02
PNKP-213ENST00000599543 ADAMTS19Q8TE59 1207 aa21.43■■□□□ 1.02
PNKP-213ENST00000599543 GDPD5Q8WTR4 605 aa21.43■■□□□ 1.02
PNKP-213ENST00000599543 SEPT1Q8WYJ6 367 aa21.43■■□□□ 1.02
PNKP-213ENST00000599543 GLG1Q92896 1179 aa21.43■■□□□ 1.02
PNKP-213ENST00000599543 TGS1Q96RS0 853 aaKnown RBP21.43■■□□□ 1.02
PNKP-213ENST00000599543 JADE2Q9NQC1 790 aa21.43■■□□□ 1.02
PNKP-213ENST00000599543 ERAP1Q9NZ08 941 aa21.43■■□□□ 1.02
PNKP-213ENST00000599543 INSL6Q9Y581 213 aa21.43■■□□□ 1.02
PNKP-213ENST00000599543 KLF18A0A0U1RQI7 1052 aa21.42■■□□□ 1.02
PNKP-213ENST00000599543 LINC01553A4QN01 128 aa21.42■■□□□ 1.02
PNKP-213ENST00000599543 GOLGA8AA7E2F4 631 aa21.42■■□□□ 1.02
PNKP-213ENST00000599543 GOLGA8BA8MQT2 603 aa21.42■■□□□ 1.02
PNKP-213ENST00000599543 hCG_1984214I3L0E3 225 aa21.42■■□□□ 1.02
PNKP-213ENST00000599543 HMGB1P09429 215 aaKnown RBP21.42■■□□□ 1.02
PNKP-213ENST00000599543 MARK3P27448 753 aa21.42■■□□□ 1.02
PNKP-213ENST00000599543 ADCY7P51828 1080 aa21.42■■□□□ 1.02
PNKP-213ENST00000599543 ADAM17P78536 824 aa21.42■■□□□ 1.02
PNKP-213ENST00000599543 PPFIA1Q13136 1202 aa21.42■■□□□ 1.02
PNKP-213ENST00000599543 MKRN4PQ13434 485 aaPredicted RBP21.42■■□□□ 1.02
PNKP-213ENST00000599543 AAK1Q2M2I8 961 aa21.42■■□□□ 1.02
PNKP-213ENST00000599543 TEX2Q8IWB9 1127 aa21.42■■□□□ 1.02
PNKP-213ENST00000599543 ZNF713Q8N859 430 aaPredicted RBP21.42■■□□□ 1.02
PNKP-213ENST00000599543 JPH1Q9HDC5 661 aaPredicted RBP21.42■■□□□ 1.02
PNKP-213ENST00000599543 RIC8AQ9NPQ8 531 aa21.42■■□□□ 1.02
PNKP-213ENST00000599543 NAP1L2Q9ULW6 460 aaPredicted RBP21.42■■□□□ 1.02
PNKP-213ENST00000599543 LPXNO60711 386 aa21.41■■□□□ 1.02
PNKP-213ENST00000599543 REC8O95072 547 aa21.41■■□□□ 1.02
PNKP-213ENST00000599543 TYW1BQ6NUM6 668 aa21.41■■□□□ 1.02
PNKP-213ENST00000599543 TAF2Q6P1X5 1199 aa21.41■■□□□ 1.02
PNKP-213ENST00000599543 APBB2Q92870 758 aa21.41■■□□□ 1.02
PNKP-213ENST00000599543 SMARCAD1Q9H4L7 1026 aa21.41■■□□□ 1.02
PNKP-213ENST00000599543 V9GY48 417 aaPredicted RBP21.41■■□□□ 1.02
PNKP-213ENST00000599543 NLRC5Q86WI3 1866 aa21.41■■□□□ 1.02
PNKP-213ENST00000599543 GSTTP1A0A1W2PQM5 241 aa21.4■■□□□ 1.02
PNKP-213ENST00000599543 FOSP01100 380 aaPredicted RBP21.4■■□□□ 1.02
PNKP-213ENST00000599543 CPA1P15085 419 aa21.4■■□□□ 1.02
PNKP-213ENST00000599543 RCAN1P53805 252 aa21.4■■□□□ 1.02
PNKP-213ENST00000599543 ERVK-21P61565 698 aa21.4■■□□□ 1.02
PNKP-213ENST00000599543 TFF2Q03403 129 aa21.4■■□□□ 1.02
PNKP-213ENST00000599543 FUT2Q10981 343 aa21.4■■□□□ 1.02
PNKP-213ENST00000599543 RSPH3Q86UC2 560 aa21.4■■□□□ 1.02
PNKP-213ENST00000599543 UHRF1Q96T88 793 aaPredicted RBP21.4■■□□□ 1.02
PNKP-213ENST00000599543 IFIH1Q9BYX4 1025 aaKnown RBP21.4■■□□□ 1.02
PNKP-213ENST00000599543 KCNH7Q9NS40 1196 aa21.4■■□□□ 1.02
PNKP-213ENST00000599543 TUBE1Q9UJT0 475 aa21.4■■□□□ 1.02
PNKP-213ENST00000599543 STXBP3O00186 592 aa21.39■■□□□ 1.01
PNKP-213ENST00000599543 GRIK4Q16099 956 aa21.39■■□□□ 1.01
PNKP-213ENST00000599543 FAM26DQ5JW98 314 aa21.39■■□□□ 1.01
PNKP-213ENST00000599543 PGBD1Q96JS3 809 aa21.39■■□□□ 1.01
PNKP-213ENST00000599543 YME1L1Q96TA2 773 aa21.39■■□□□ 1.01
PNKP-213ENST00000599543 MXRA8Q9BRK3 442 aa21.39■■□□□ 1.01
PNKP-213ENST00000599543 SDF4Q9BRK5 362 aa21.39■■□□□ 1.01
PNKP-213ENST00000599543 ANO3Q9BYT9 981 aa21.39■■□□□ 1.01
PNKP-213ENST00000599543 OSBPL7Q9BZF2 842 aa21.39■■□□□ 1.01
PNKP-213ENST00000599543 GLT8D2Q9H1C3 349 aa21.39■■□□□ 1.01
PNKP-213ENST00000599543 AZI2Q9H6S1 392 aa21.39■■□□□ 1.01
PNKP-213ENST00000599543 SUGCTQ9HAC7 445 aa21.39■■□□□ 1.01
PNKP-213ENST00000599543 BARHL2Q9NY43 387 aa21.39■■□□□ 1.01
PNKP-213ENST00000599543 LMCD1Q9NZU5 365 aa21.39■■□□□ 1.01
PNKP-213ENST00000599543 SLC9A2Q9UBY0 812 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms