RNA–Protein interactions for RNA: ENST00000598159.6

SSBP4-205, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 3

Gene SSBP4, Length 747 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-205ENST00000598159 RUFY3Q7L099 469 aa26.3■■□□□ 1.8
SSBP4-205ENST00000598159 PHF6Q8IWS0 365 aaKnown RBP eCLIP26.3■■□□□ 1.82e-6■■■■□ 19.6
SSBP4-205ENST00000598159 ANO3Q9BYT9 981 aa26.3■■□□□ 1.8
SSBP4-205ENST00000598159 KCNH7Q9NS40 1196 aa26.3■■□□□ 1.8
SSBP4-205ENST00000598159 EMSYQ7Z589 1322 aa26.3■■□□□ 1.8
SSBP4-205ENST00000598159 NID2Q14112 1375 aa26.3■■□□□ 1.8
SSBP4-205ENST00000598159 IKBKEQ14164 716 aa26.29■■□□□ 1.8
SSBP4-205ENST00000598159 PPP2R2DQ66LE6 453 aa26.29■■□□□ 1.8
SSBP4-205ENST00000598159 MCTP2Q6DN12 878 aa26.29■■□□□ 1.8
SSBP4-205ENST00000598159 TRIM50Q86XT4 487 aa26.29■■□□□ 1.8
SSBP4-205ENST00000598159 HERC6Q8IVU3 1022 aa26.29■■□□□ 1.8
SSBP4-205ENST00000598159 CCDC12Q8WUD4 166 aaPredicted RBP26.29■■□□□ 1.8
SSBP4-205ENST00000598159 PGBD1Q96JS3 809 aa26.29■■□□□ 1.8
SSBP4-205ENST00000598159 SMARCAD1Q9H4L7 1026 aa26.29■■□□□ 1.8
SSBP4-205ENST00000598159 ZSWIM6Q9HCJ5 1215 aa26.29■■□□□ 1.8
SSBP4-205ENST00000598159 NRCAMQ92823 1304 aa26.29■■□□□ 1.8
SSBP4-205ENST00000598159 ESYT2A0FGR8 921 aa26.28■■□□□ 1.8
SSBP4-205ENST00000598159 SREBF1P36956 1147 aa26.28■■□□□ 1.8
SSBP4-205ENST00000598159 ADAM17P78536 824 aa26.28■■□□□ 1.8
SSBP4-205ENST00000598159 AKAP17AQ02040 695 aaKnown RBP26.28■■□□□ 1.8
SSBP4-205ENST00000598159 CEP55Q53EZ4 464 aa26.28■■□□□ 1.8
SSBP4-205ENST00000598159 ZMYND12Q9H0C1 365 aa26.28■■□□□ 1.8
SSBP4-205ENST00000598159 ERAP1Q9NZ08 941 aa26.28■■□□□ 1.8
SSBP4-205ENST00000598159 PKD2L1Q9P0L9 805 aa26.28■■□□□ 1.8
SSBP4-205ENST00000598159 CDH23Q9H251 3354 aa26.28■■□□□ 1.8
SSBP4-205ENST00000598159 DLL1O00548 723 aa26.27■■□□□ 1.8
SSBP4-205ENST00000598159 LGR5O75473 907 aa26.27■■□□□ 1.8
SSBP4-205ENST00000598159 PDIA3P30101 505 aaKnown RBP26.27■■□□□ 1.8
SSBP4-205ENST00000598159 ZNF76P36508 570 aa26.27■■□□□ 1.8
SSBP4-205ENST00000598159 WDR5P61964 334 aaKnown RBP26.27■■□□□ 1.8
SSBP4-205ENST00000598159 PKN1Q16512 942 aa26.27■■□□□ 1.8
SSBP4-205ENST00000598159 CYP2W1Q8TAV3 490 aa26.27■■□□□ 1.8
SSBP4-205ENST00000598159 GLG1Q92896 1179 aa26.27■■□□□ 1.8
SSBP4-205ENST00000598159 SDF4Q9BRK5 362 aa26.27■■□□□ 1.8
SSBP4-205ENST00000598159 TM6SF1Q9BZW5 370 aa26.27■■□□□ 1.8
SSBP4-205ENST00000598159 C6orf50Q9HD87 102 aa26.27■■□□□ 1.8
SSBP4-205ENST00000598159 JPH1Q9HDC5 661 aaPredicted RBP26.27■■□□□ 1.8
SSBP4-205ENST00000598159 TMEM260Q9NX78 707 aa26.27■■□□□ 1.8
SSBP4-205ENST00000598159 SLC9A2Q9UBY0 812 aa26.27■■□□□ 1.8
SSBP4-205ENST00000598159 CYP46A1Q9Y6A2 500 aa26.27■■□□□ 1.8
SSBP4-205ENST00000598159 NFASCO94856 1347 aa26.27■■□□□ 1.8
SSBP4-205ENST00000598159 MEIS1O00470 390 aa26.26■■□□□ 1.79
SSBP4-205ENST00000598159 ARHGAP4P98171 946 aa26.26■■□□□ 1.79
SSBP4-205ENST00000598159 MBTPS1Q14703 1052 aa26.26■■□□□ 1.79
SSBP4-205ENST00000598159 NTRK3Q16288 839 aa26.26■■□□□ 1.79
SSBP4-205ENST00000598159 NIPA1Q7RTP0 329 aa26.26■■□□□ 1.79
SSBP4-205ENST00000598159 RNF26Q9BY78 433 aaPredicted RBP26.26■■□□□ 1.79
SSBP4-205ENST00000598159 CA3P07451 260 aa26.25■■□□□ 1.79
SSBP4-205ENST00000598159 ARP10275 920 aa26.25■■□□□ 1.79
SSBP4-205ENST00000598159 IFNAR1P17181 557 aa26.25■■□□□ 1.79
SSBP4-205ENST00000598159 GNA11P29992 359 aa26.25■■□□□ 1.79
SSBP4-205ENST00000598159 JAKMIP3Q5VZ66 844 aa26.25■■□□□ 1.79
SSBP4-205ENST00000598159 LMBR1Q8WVP7 490 aa26.25■■□□□ 1.79
SSBP4-205ENST00000598159 TNPO1Q92973 898 aaKnown RBP26.25■■□□□ 1.79
SSBP4-205ENST00000598159 TLL1O43897 1013 aa26.24■■□□□ 1.79
SSBP4-205ENST00000598159 CYP3A4P08684 503 aa26.24■■□□□ 1.79
SSBP4-205ENST00000598159 PHKBQ93100 1093 aa26.24■■□□□ 1.79
SSBP4-205ENST00000598159 ZBED2Q9BTP6 218 aa26.24■■□□□ 1.79
SSBP4-205ENST00000598159 AZI2Q9H6S1 392 aa26.24■■□□□ 1.79
SSBP4-205ENST00000598159 AGO4Q9HCK5 861 aaKnown RBP26.24■■□□□ 1.79
SSBP4-205ENST00000598159 IGFBP4P22692 258 aa26.23■■□□□ 1.79
SSBP4-205ENST00000598159 CCT2P78371 535 aaKnown RBP26.23■■□□□ 1.79
SSBP4-205ENST00000598159 TOB2Q14106 344 aaPredicted RBP26.23■■□□□ 1.79
SSBP4-205ENST00000598159 TCTN1Q2MV58 587 aa26.23■■□□□ 1.79
SSBP4-205ENST00000598159 PLEKHG4Q58EX7 1191 aa26.23■■□□□ 1.79
SSBP4-205ENST00000598159 RPAINQ86UA6 219 aa26.23■■□□□ 1.79
SSBP4-205ENST00000598159 DBF4BQ8NFT6 615 aa26.23■■□□□ 1.79
SSBP4-205ENST00000598159 ZNF274Q96GC6 653 aaPredicted RBP26.23■■□□□ 1.79
SSBP4-205ENST00000598159 PPFIA1Q13136 1202 aa26.22■■□□□ 1.79
SSBP4-205ENST00000598159 ADGRE1Q14246 886 aa26.22■■□□□ 1.79
SSBP4-205ENST00000598159 FAM26DQ5JW98 314 aa26.22■■□□□ 1.79
SSBP4-205ENST00000598159 TAF2Q6P1X5 1199 aa26.22■■□□□ 1.79
SSBP4-205ENST00000598159 BICD2Q8TD16 824 aa26.22■■□□□ 1.79
SSBP4-205ENST00000598159 SLC26A6Q9BXS9 759 aa26.22■■□□□ 1.79
SSBP4-205ENST00000598159 EYSQ5T1H1 3165 aa26.21■■□□□ 1.79
SSBP4-205ENST00000598159 RRN3P2A6NIE6 340 aa26.21■■□□□ 1.79
SSBP4-205ENST00000598159 ATG7O95352 703 aa26.21■■□□□ 1.79
SSBP4-205ENST00000598159 MARK3P27448 753 aa26.21■■□□□ 1.79
SSBP4-205ENST00000598159 ACTR2P61160 394 aa26.21■■□□□ 1.79
SSBP4-205ENST00000598159 DEFB103AP81534 67 aa26.21■■□□□ 1.79
SSBP4-205ENST00000598159 GRIK4Q16099 956 aa26.21■■□□□ 1.79
SSBP4-205ENST00000598159 PLPPR4Q7Z2D5 763 aa26.21■■□□□ 1.79
SSBP4-205ENST00000598159 RSPH3Q86UC2 560 aa26.21■■□□□ 1.79
SSBP4-205ENST00000598159 PLA2G4DQ86XP0 818 aa26.21■■□□□ 1.79
SSBP4-205ENST00000598159 REXO1Q8N1G1 1221 aaKnown RBP26.21■■□□□ 1.79
SSBP4-205ENST00000598159 CCDC148Q8NFR7 591 aa26.21■■□□□ 1.79
SSBP4-205ENST00000598159 CRYGNQ8WXF5 182 aa26.21■■□□□ 1.79
SSBP4-205ENST00000598159 SEPT8Q92599 483 aa26.21■■□□□ 1.79
SSBP4-205ENST00000598159 PCYT2Q99447 389 aa26.21■■□□□ 1.79
SSBP4-205ENST00000598159 STAT5BP51692 787 aa26.2■■□□□ 1.78
SSBP4-205ENST00000598159 TAP1Q03518 808 aa26.2■■□□□ 1.78
SSBP4-205ENST00000598159 ITGB3BPQ13352 177 aaPredicted RBP26.2■■□□□ 1.78
SSBP4-205ENST00000598159 RAD9AQ99638 391 aa26.2■■□□□ 1.78
SSBP4-205ENST00000598159 SH3GLB2Q9NR46 395 aa26.2■■□□□ 1.78
SSBP4-205ENST00000598159 MBLAC1A4D2B0 266 aaPredicted RBP26.19■■□□□ 1.78
SSBP4-205ENST00000598159 FAM86B1E9PN63 330 aa26.19■■□□□ 1.78
SSBP4-205ENST00000598159 GJB5O95377 273 aa26.19■■□□□ 1.78
SSBP4-205ENST00000598159 CTSHP09668 335 aa26.19■■□□□ 1.78
SSBP4-205ENST00000598159 FAM86B2P0C5J1 330 aa26.19■■□□□ 1.78
SSBP4-205ENST00000598159 SSRP1Q08945 709 aaKnown RBP26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms