RNA–Protein interactions for RNA: ENST00000597724.6

SSBP4-204, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 865 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-204ENST00000597724 HIC1Q14526 733 aa19.01■□□□□ 0.63
SSBP4-204ENST00000597724 SHHQ15465 462 aa19.01■□□□□ 0.63
SSBP4-204ENST00000597724 LRIT3Q3SXY7 679 aa19.01■□□□□ 0.63
SSBP4-204ENST00000597724 C9orf50Q5SZB4 431 aa19.01■□□□□ 0.63
SSBP4-204ENST00000597724 KRT25Q7Z3Z0 450 aa19.01■□□□□ 0.63
SSBP4-204ENST00000597724 CCDC83Q8IWF9 413 aa19.01■□□□□ 0.63
SSBP4-204ENST00000597724 LENG9Q96B70 501 aa19.01■□□□□ 0.63
SSBP4-204ENST00000597724 ZNF577Q9BSK1 485 aa19.01■□□□□ 0.63
SSBP4-204ENST00000597724 WNT8AQ9H1J5 351 aa19.01■□□□□ 0.63
SSBP4-204ENST00000597724 SH2B1Q9NRF2 756 aaPredicted RBP19.01■□□□□ 0.63
SSBP4-204ENST00000597724 ZNF215Q9UL58 517 aaPredicted RBP19.01■□□□□ 0.63
SSBP4-204ENST00000597724 HOXC8P31273 242 aa19■□□□□ 0.63
SSBP4-204ENST00000597724 ACTR2P61160 394 aa19■□□□□ 0.63
SSBP4-204ENST00000597724 NONOQ15233 471 aaKnown RBP eCLIP19■□□□□ 0.631e-6■■■■□ 20.4
SSBP4-204ENST00000597724 PRR16Q569H4 304 aa19■□□□□ 0.63
SSBP4-204ENST00000597724 C16orf59Q7L2K0 433 aa19■□□□□ 0.63
SSBP4-204ENST00000597724 OXER1Q8TDS5 423 aa19■□□□□ 0.63
SSBP4-204ENST00000597724 LLPHQ9BRT6 129 aaKnown RBP19■□□□□ 0.63
SSBP4-204ENST00000597724 BACH2Q9BYV9 841 aa19■□□□□ 0.63
SSBP4-204ENST00000597724 RNPEPQ9H4A4 650 aa19■□□□□ 0.63
SSBP4-204ENST00000597724 CYP3A7-CYP3A51PA0A087WV96 503 aa18.99■□□□□ 0.63
SSBP4-204ENST00000597724 C17orf102A2RUQ5 167 aa18.99■□□□□ 0.63
SSBP4-204ENST00000597724 PITPNM1O00562 1244 aa18.99■□□□□ 0.63
SSBP4-204ENST00000597724 ST18O60284 1047 aa18.99■□□□□ 0.63
SSBP4-204ENST00000597724 LGR5O75473 907 aa18.99■□□□□ 0.63
SSBP4-204ENST00000597724 ATG7O95352 703 aa18.99■□□□□ 0.63
SSBP4-204ENST00000597724 CCNE2O96020 404 aa18.99■□□□□ 0.63
SSBP4-204ENST00000597724 SMIM10L2AP0DMW4 78 aa18.99■□□□□ 0.63
SSBP4-204ENST00000597724 SMIM10L2BP0DMW5 78 aa18.99■□□□□ 0.63
SSBP4-204ENST00000597724 CYP3A7P24462 503 aa18.99■□□□□ 0.63
SSBP4-204ENST00000597724 ZNF200P98182 395 aaPredicted RBP18.99■□□□□ 0.63
SSBP4-204ENST00000597724 BFSP2Q13515 415 aa18.99■□□□□ 0.63
SSBP4-204ENST00000597724 UIMC1Q96RL1 719 aa18.99■□□□□ 0.63
SSBP4-204ENST00000597724 PCYT2Q99447 389 aa18.99■□□□□ 0.63
SSBP4-204ENST00000597724 SMARCAD1Q9H4L7 1026 aa18.99■□□□□ 0.63
SSBP4-204ENST00000597724 TBC1D22BQ9NU19 505 aa18.99■□□□□ 0.63
SSBP4-204ENST00000597724 TRIP12Q14669 1992 aaPredicted RBP18.99■□□□□ 0.63
SSBP4-204ENST00000597724 EMSYQ7Z589 1322 aa18.99■□□□□ 0.63
SSBP4-204ENST00000597724 CCDC194A0A1B0GVG4 234 aa18.98■□□□□ 0.63
SSBP4-204ENST00000597724 SOX1O00570 391 aaPredicted RBP18.98■□□□□ 0.63
SSBP4-204ENST00000597724 RBL2Q08999 1139 aa18.98■□□□□ 0.63
SSBP4-204ENST00000597724 PTK7Q13308 1070 aa18.98■□□□□ 0.63
SSBP4-204ENST00000597724 INF2Q27J81 1249 aa18.98■□□□□ 0.63
SSBP4-204ENST00000597724 Q4G0T1 1027 aa18.98■□□□□ 0.63
SSBP4-204ENST00000597724 CAGE1Q8TC20 777 aa18.98■□□□□ 0.63
SSBP4-204ENST00000597724 DHX38Q92620 1227 aaKnown RBP18.98■□□□□ 0.63
SSBP4-204ENST00000597724 GLG1Q92896 1179 aa18.98■□□□□ 0.63
SSBP4-204ENST00000597724 SCLYQ96I15 445 aa18.98■□□□□ 0.63
SSBP4-204ENST00000597724 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.98■□□□□ 0.632e-9■□□□□ 10.9
SSBP4-204ENST00000597724 IL23AQ9NPF7 189 aa18.98■□□□□ 0.63
SSBP4-204ENST00000597724 SETD4Q9NVD3 440 aa18.98■□□□□ 0.63
SSBP4-204ENST00000597724 ERAP1Q9NZ08 941 aa18.98■□□□□ 0.63
SSBP4-204ENST00000597724 DDX39AO00148 427 aaKnown RBP18.97■□□□□ 0.63
SSBP4-204ENST00000597724 MSH4O15457 936 aa18.97■□□□□ 0.63
SSBP4-204ENST00000597724 ACRP10323 421 aa18.97■□□□□ 0.63
SSBP4-204ENST00000597724 TMEM240Q5SV17 173 aa18.97■□□□□ 0.63
SSBP4-204ENST00000597724 MOXD1Q6UVY6 613 aa18.97■□□□□ 0.63
SSBP4-204ENST00000597724 ABHD15Q6UXT9 468 aa18.97■□□□□ 0.63
SSBP4-204ENST00000597724 SERINC5Q86VE9 423 aa18.97■□□□□ 0.63
SSBP4-204ENST00000597724 CCDC155Q8N6L0 562 aa18.97■□□□□ 0.63
SSBP4-204ENST00000597724 RETREG2Q8NC44 543 aa18.97■□□□□ 0.63
SSBP4-204ENST00000597724 ATP6V0A1Q93050 837 aa18.97■□□□□ 0.63
SSBP4-204ENST00000597724 MBOAT7Q96N66 472 aa18.97■□□□□ 0.63
SSBP4-204ENST00000597724 SZT2Q5T011 3432 aa18.96■□□□□ 0.63
SSBP4-204ENST00000597724 IGKV6D-21A0A0A0MT36 114 aa18.96■□□□□ 0.63
SSBP4-204ENST00000597724 TDP2O95551 362 aa18.96■□□□□ 0.63
SSBP4-204ENST00000597724 MMP1P03956 469 aa18.96■□□□□ 0.63
SSBP4-204ENST00000597724 IQCF3P0C7M6 154 aa18.96■□□□□ 0.63
SSBP4-204ENST00000597724 KRT2P35908 639 aa18.96■□□□□ 0.63
SSBP4-204ENST00000597724 ADAM17P78536 824 aa18.96■□□□□ 0.63
SSBP4-204ENST00000597724 NR5A1Q13285 461 aa18.96■□□□□ 0.63
SSBP4-204ENST00000597724 TRIM29Q14134 588 aa18.96■□□□□ 0.63
SSBP4-204ENST00000597724 TRIM71Q2Q1W2 868 aaKnown RBP18.96■□□□□ 0.63
SSBP4-204ENST00000597724 KRT40Q6A162 431 aa18.96■□□□□ 0.63
SSBP4-204ENST00000597724 PLPPR4Q7Z2D5 763 aa18.96■□□□□ 0.63
SSBP4-204ENST00000597724 AFAP1L1Q8TED9 768 aa18.96■□□□□ 0.63
SSBP4-204ENST00000597724 SLC5A5Q92911 643 aa18.96■□□□□ 0.63
SSBP4-204ENST00000597724 TNFRSF25Q93038 417 aa18.96■□□□□ 0.63
SSBP4-204ENST00000597724 WNT8BQ93098 351 aa18.96■□□□□ 0.63
SSBP4-204ENST00000597724 VWCEQ96DN2 955 aa18.96■□□□□ 0.63
SSBP4-204ENST00000597724 RIT2Q99578 217 aa18.96■□□□□ 0.63
SSBP4-204ENST00000597724 AZI2Q9H6S1 392 aa18.96■□□□□ 0.63
SSBP4-204ENST00000597724 BRMS1Q9HCU9 246 aa18.96■□□□□ 0.63
SSBP4-204ENST00000597724 NRCAMQ92823 1304 aa18.96■□□□□ 0.63
SSBP4-204ENST00000597724 TREHO43280 583 aa18.95■□□□□ 0.62
SSBP4-204ENST00000597724 CD2BP2O95400 341 aaKnown RBP18.95■□□□□ 0.62
SSBP4-204ENST00000597724 GNAT1P11488 350 aa18.95■□□□□ 0.62
SSBP4-204ENST00000597724 CKBP12277 381 aa18.95■□□□□ 0.62
SSBP4-204ENST00000597724 MARK3P27448 753 aa18.95■□□□□ 0.62
SSBP4-204ENST00000597724 STAT5BP51692 787 aa18.95■□□□□ 0.62
SSBP4-204ENST00000597724 HMGN5P82970 282 aaKnown RBP18.95■□□□□ 0.62
SSBP4-204ENST00000597724 EARS2Q5JPH6 523 aaKnown RBP18.95■□□□□ 0.62
SSBP4-204ENST00000597724 PPP4R3AQ6IN85 833 aa18.95■□□□□ 0.62
SSBP4-204ENST00000597724 ZNF746Q6NUN9 644 aaPredicted RBP18.95■□□□□ 0.62
SSBP4-204ENST00000597724 PSRC1Q6PGN9 363 aaPredicted RBP18.95■□□□□ 0.62
SSBP4-204ENST00000597724 PIK3AP1Q6ZUJ8 805 aa18.95■□□□□ 0.62
SSBP4-204ENST00000597724 ZNF365Q70YC5 407 aa18.95■□□□□ 0.62
SSBP4-204ENST00000597724 NEK8Q86SG6 692 aa18.95■□□□□ 0.62
SSBP4-204ENST00000597724 RPUSD2Q8IZ73 545 aaKnown RBP18.95■□□□□ 0.62
SSBP4-204ENST00000597724 BTBD18B2RXH4 712 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms