RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 NKX2-4Q9H2Z4 354 aa15.86■□□□□ 0.13
APOC1-208ENST00000592535 KCNH7Q9NS40 1196 aa15.86■□□□□ 0.13
APOC1-208ENST00000592535 SETD4Q9NVD3 440 aa15.86■□□□□ 0.13
APOC1-208ENST00000592535 MYO9BQ13459 2157 aa15.86■□□□□ 0.13
APOC1-208ENST00000592535 TREHO43280 583 aa15.85■□□□□ 0.13
APOC1-208ENST00000592535 ARP10275 920 aa15.85■□□□□ 0.13
APOC1-208ENST00000592535 MYOGP15173 224 aa15.85■□□□□ 0.13
APOC1-208ENST00000592535 IFNAR1P17181 557 aa15.85■□□□□ 0.13
APOC1-208ENST00000592535 AKAP17AQ02040 695 aaKnown RBP15.85■□□□□ 0.13
APOC1-208ENST00000592535 SEPT1Q8WYJ6 367 aa15.85■□□□□ 0.13
APOC1-208ENST00000592535 RNF26Q9BY78 433 aaPredicted RBP15.85■□□□□ 0.13
APOC1-208ENST00000592535 ZMYND12Q9H0C1 365 aa15.85■□□□□ 0.13
APOC1-208ENST00000592535 C6orf50Q9HD87 102 aa15.85■□□□□ 0.13
APOC1-208ENST00000592535 COL6A3P12111 3177 aa15.85■□□□□ 0.13
APOC1-208ENST00000592535 PARNO95453 639 aaKnown RBP15.84■□□□□ 0.13
APOC1-208ENST00000592535 CXCL10P02778 98 aa15.84■□□□□ 0.13
APOC1-208ENST00000592535 THPOP40225 353 aa15.84■□□□□ 0.13
APOC1-208ENST00000592535 ARHGAP4P98171 946 aa15.84■□□□□ 0.13
APOC1-208ENST00000592535 MBTPS1Q14703 1052 aa15.84■□□□□ 0.13
APOC1-208ENST00000592535 TCTN1Q2MV58 587 aa15.84■□□□□ 0.13
APOC1-208ENST00000592535 CEP55Q53EZ4 464 aa15.84■□□□□ 0.13
APOC1-208ENST00000592535 SLC17A8Q8NDX2 589 aa15.84■□□□□ 0.13
APOC1-208ENST00000592535 CCDC12Q8WUD4 166 aaPredicted RBP15.84■□□□□ 0.13
APOC1-208ENST00000592535 SLC9A7Q96T83 725 aa15.84■□□□□ 0.13
APOC1-208ENST00000592535 AGO4Q9HCK5 861 aaKnown RBP15.84■□□□□ 0.13
APOC1-208ENST00000592535 JPH1Q9HDC5 661 aaPredicted RBP15.84■□□□□ 0.13
APOC1-208ENST00000592535 MEIS1O00470 390 aa15.83■□□□□ 0.12
APOC1-208ENST00000592535 BAIAP3O94812 1187 aa15.83■□□□□ 0.12
APOC1-208ENST00000592535 FOSL2P15408 326 aa15.83■□□□□ 0.12
APOC1-208ENST00000592535 MARK3P27448 753 aa15.83■□□□□ 0.12
APOC1-208ENST00000592535 ZNF76P36508 570 aa15.83■□□□□ 0.12
APOC1-208ENST00000592535 ADAM17P78536 824 aa15.83■□□□□ 0.12
APOC1-208ENST00000592535 CNKSR3Q6P9H4 555 aa15.83■□□□□ 0.12
APOC1-208ENST00000592535 REXO1Q8N1G1 1221 aaKnown RBP15.83■□□□□ 0.12
APOC1-208ENST00000592535 MAFAQ8NHW3 353 aaPredicted RBP15.83■□□□□ 0.12
APOC1-208ENST00000592535 RASGRP4Q8TDF6 673 aa15.83■□□□□ 0.12
APOC1-208ENST00000592535 LMBR1Q8WVP7 490 aa15.83■□□□□ 0.12
APOC1-208ENST00000592535 CRYGNQ8WXF5 182 aa15.83■□□□□ 0.12
APOC1-208ENST00000592535 ZNF274Q96GC6 653 aaPredicted RBP15.83■□□□□ 0.12
APOC1-208ENST00000592535 SDF4Q9BRK5 362 aa15.83■□□□□ 0.12
APOC1-208ENST00000592535 SLC28A3Q9HAS3 691 aa15.83■□□□□ 0.12
APOC1-208ENST00000592535 PDRG1Q9NUG6 133 aa15.83■□□□□ 0.12
APOC1-208ENST00000592535 VPS54Q9P1Q0 977 aa15.83■□□□□ 0.12
APOC1-208ENST00000592535 SLC9A2Q9UBY0 812 aa15.83■□□□□ 0.12
APOC1-208ENST00000592535 PCDHA11Q9Y5I1 949 aa15.83■□□□□ 0.12
APOC1-208ENST00000592535 NFASCO94856 1347 aa15.83■□□□□ 0.12
APOC1-208ENST00000592535 MICAL3Q7RTP6 2002 aa15.83■□□□□ 0.12
APOC1-208ENST00000592535 SIP14410 1827 aa15.82■□□□□ 0.12
APOC1-208ENST00000592535 RSPH10B2B2RC85 870 aa15.82■□□□□ 0.12
APOC1-208ENST00000592535 FAM86B1E9PN63 330 aa15.82■□□□□ 0.12
APOC1-208ENST00000592535 FAM86B2P0C5J1 330 aa15.82■□□□□ 0.12
APOC1-208ENST00000592535 RSPH10BP0C881 870 aa15.82■□□□□ 0.12
APOC1-208ENST00000592535 GNAT1P11488 350 aa15.82■□□□□ 0.12
APOC1-208ENST00000592535 GNA11P29992 359 aa15.82■□□□□ 0.12
APOC1-208ENST00000592535 STK3Q13188 491 aa15.82■□□□□ 0.12
APOC1-208ENST00000592535 ITGB3BPQ13352 177 aaPredicted RBP15.82■□□□□ 0.12
APOC1-208ENST00000592535 CCDC148Q8NFR7 591 aa15.82■□□□□ 0.12
APOC1-208ENST00000592535 GLG1Q92896 1179 aa15.82■□□□□ 0.12
APOC1-208ENST00000592535 PCYT2Q99447 389 aa15.82■□□□□ 0.12
APOC1-208ENST00000592535 SMARCAD1Q9H4L7 1026 aa15.82■□□□□ 0.12
APOC1-208ENST00000592535 PRDM12Q9H4Q4 367 aa15.82■□□□□ 0.12
APOC1-208ENST00000592535 ERAP1Q9NZ08 941 aa15.82■□□□□ 0.12
APOC1-208ENST00000592535 EMSYQ7Z589 1322 aa15.82■□□□□ 0.12
APOC1-208ENST00000592535 NRCAMQ92823 1304 aa15.82■□□□□ 0.12
APOC1-208ENST00000592535 DDX39AO00148 427 aaKnown RBP15.81■□□□□ 0.12
APOC1-208ENST00000592535 LGR5O75473 907 aa15.81■□□□□ 0.12
APOC1-208ENST00000592535 CYP3A4P08684 503 aa15.81■□□□□ 0.12
APOC1-208ENST00000592535 CTSHP09668 335 aa15.81■□□□□ 0.12
APOC1-208ENST00000592535 KCNJ6P48051 423 aa15.81■□□□□ 0.12
APOC1-208ENST00000592535 ACTR2P61160 394 aa15.81■□□□□ 0.12
APOC1-208ENST00000592535 WDR5P61964 334 aaKnown RBP15.81■□□□□ 0.12
APOC1-208ENST00000592535 SSRP1Q08945 709 aaKnown RBP15.81■□□□□ 0.12
APOC1-208ENST00000592535 PPFIA1Q13136 1202 aa15.81■□□□□ 0.12
APOC1-208ENST00000592535 MCTP2Q6DN12 878 aa15.81■□□□□ 0.12
APOC1-208ENST00000592535 NIPA1Q7RTP0 329 aa15.81■□□□□ 0.12
APOC1-208ENST00000592535 PLA2G4DQ86XP0 818 aa15.81■□□□□ 0.12
APOC1-208ENST00000592535 HERC6Q8IVU3 1022 aa15.81■□□□□ 0.12
APOC1-208ENST00000592535 PHOSPHO2Q8TCD6 241 aa15.81■□□□□ 0.12
APOC1-208ENST00000592535 WDR81Q562E7 1941 aa15.8■□□□□ 0.12
APOC1-208ENST00000592535 IGLV3-22A0A075B6J6 115 aa15.8■□□□□ 0.12
APOC1-208ENST00000592535 CPLX1O14810 134 aa15.8■□□□□ 0.12
APOC1-208ENST00000592535 CA3P07451 260 aa15.8■□□□□ 0.12
APOC1-208ENST00000592535 DEFB103AP81534 67 aa15.8■□□□□ 0.12
APOC1-208ENST00000592535 GRIK4Q16099 956 aa15.8■□□□□ 0.12
APOC1-208ENST00000592535 PPP2R2DQ66LE6 453 aa15.8■□□□□ 0.12
APOC1-208ENST00000592535 RUFY4Q6ZNE9 571 aa15.8■□□□□ 0.12
APOC1-208ENST00000592535 TMCO2Q7Z6W1 182 aaPredicted RBP15.8■□□□□ 0.12
APOC1-208ENST00000592535 TRIM22Q8IYM9 498 aa15.8■□□□□ 0.12
APOC1-208ENST00000592535 UIMC1Q96RL1 719 aa15.8■□□□□ 0.12
APOC1-208ENST00000592535 OSBPL7Q9BZF2 842 aa15.8■□□□□ 0.12
APOC1-208ENST00000592535 MYH9P35579 1960 aaKnown RBP15.79■□□□□ 0.12
APOC1-208ENST00000592535 ABHD14A-ACY1A0A1B0GW23 586 aa15.79■□□□□ 0.12
APOC1-208ENST00000592535 CAND2O75155 1236 aa15.79■□□□□ 0.12
APOC1-208ENST00000592535 CCNE2O96020 404 aa15.79■□□□□ 0.12
APOC1-208ENST00000592535 NLRP5P59047 1200 aa15.79■□□□□ 0.12
APOC1-208ENST00000592535 ANAPC15P60006 121 aa15.79■□□□□ 0.12
APOC1-208ENST00000592535 IKBKEQ14164 716 aa15.79■□□□□ 0.12
APOC1-208ENST00000592535 DBF4BQ8NFT6 615 aa15.79■□□□□ 0.12
APOC1-208ENST00000592535 BICD2Q8TD16 824 aa15.79■□□□□ 0.12
APOC1-208ENST00000592535 GAS2L1Q99501 681 aaPredicted RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms