RNA–Protein interactions for RNA: ENST00000592017.5

CLIP3-205, Transcript of CAP-Gly domain containing linker protein 3, humanhuman

TSL 5

Gene CLIP3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3-205ENST00000592017 CAGE1Q8TC20 777 aa15.88■□□□□ 0.13
CLIP3-205ENST00000592017 BICD2Q8TD16 824 aa15.88■□□□□ 0.13
CLIP3-205ENST00000592017 GTF3C6Q969F1 213 aa15.88■□□□□ 0.13
CLIP3-205ENST00000592017 SENP7Q9BQF6 1050 aa15.88■□□□□ 0.13
CLIP3-205ENST00000592017 YBX2Q9Y2T7 364 aaKnown RBP15.88■□□□□ 0.13
CLIP3-205ENST00000592017 KIAA1217Q5T5P2 1943 aa15.88■□□□□ 0.13
CLIP3-205ENST00000592017 ZBBXA8MT70 800 aa15.87■□□□□ 0.13
CLIP3-205ENST00000592017 H3BRB1 525 aa15.87■□□□□ 0.13
CLIP3-205ENST00000592017 LGALS2P05162 132 aa15.87■□□□□ 0.13
CLIP3-205ENST00000592017 CKBP12277 381 aa15.87■□□□□ 0.13
CLIP3-205ENST00000592017 MYOGP15173 224 aa15.87■□□□□ 0.13
CLIP3-205ENST00000592017 SELPP16109 830 aa15.87■□□□□ 0.13
CLIP3-205ENST00000592017 RBL2Q08999 1139 aa15.87■□□□□ 0.13
CLIP3-205ENST00000592017 PTK7Q13308 1070 aa15.87■□□□□ 0.13
CLIP3-205ENST00000592017 CYP2W1Q8TAV3 490 aa15.87■□□□□ 0.13
CLIP3-205ENST00000592017 AFAP1L1Q8TED9 768 aa15.87■□□□□ 0.13
CLIP3-205ENST00000592017 MXRA8Q9BRK3 442 aa15.87■□□□□ 0.13
CLIP3-205ENST00000592017 FTOQ9C0B1 505 aaKnown RBP eCLIP15.87■□□□□ 0.13
CLIP3-205ENST00000592017 TUT1Q9H6E5 874 aaKnown RBP15.87■□□□□ 0.13
CLIP3-205ENST00000592017 SH3GLB2Q9NR46 395 aa15.87■□□□□ 0.13
CLIP3-205ENST00000592017 STK36Q9NRP7 1315 aa15.87■□□□□ 0.13
CLIP3-205ENST00000592017 CTDNEP1O95476 244 aa15.86■□□□□ 0.13
CLIP3-205ENST00000592017 KCNA2P16389 499 aa15.86■□□□□ 0.13
CLIP3-205ENST00000592017 HOXC8P31273 242 aa15.86■□□□□ 0.13
CLIP3-205ENST00000592017 RBM25P49756 843 aaKnown RBP15.86■□□□□ 0.13
CLIP3-205ENST00000592017 RAB30Q15771 203 aa15.86■□□□□ 0.13
CLIP3-205ENST00000592017 CEP55Q53EZ4 464 aa15.86■□□□□ 0.13
CLIP3-205ENST00000592017 MCTP2Q6DN12 878 aa15.86■□□□□ 0.13
CLIP3-205ENST00000592017 LRRC8DQ7L1W4 858 aa15.86■□□□□ 0.13
CLIP3-205ENST00000592017 TRIM50Q86XT4 487 aa15.86■□□□□ 0.13
CLIP3-205ENST00000592017 CCDC155Q8N6L0 562 aa15.86■□□□□ 0.13
CLIP3-205ENST00000592017 KIF2CQ99661 725 aa15.86■□□□□ 0.13
CLIP3-205ENST00000592017 NKX2-4Q9H2Z4 354 aa15.86■□□□□ 0.13
CLIP3-205ENST00000592017 ORC3Q9UBD5 711 aaPredicted RBP15.86■□□□□ 0.13
CLIP3-205ENST00000592017 MSRAQ9UJ68 235 aa15.86■□□□□ 0.13
CLIP3-205ENST00000592017 PCDHA4Q9UN74 947 aa15.86■□□□□ 0.13
CLIP3-205ENST00000592017 EYSQ5T1H1 3165 aa15.85■□□□□ 0.13
CLIP3-205ENST00000592017 NBNO60934 754 aa15.85■□□□□ 0.13
CLIP3-205ENST00000592017 SMIM10L2AP0DMW4 78 aa15.85■□□□□ 0.13
CLIP3-205ENST00000592017 SMIM10L2BP0DMW5 78 aa15.85■□□□□ 0.13
CLIP3-205ENST00000592017 ACTN1P12814 892 aa15.85■□□□□ 0.13
CLIP3-205ENST00000592017 FOSL2P15408 326 aa15.85■□□□□ 0.13
CLIP3-205ENST00000592017 ATP2A2P16615 1042 aaKnown RBP15.85■□□□□ 0.13
CLIP3-205ENST00000592017 XBP1P17861 261 aa15.85■□□□□ 0.13
CLIP3-205ENST00000592017 FOSBP53539 338 aa15.85■□□□□ 0.13
CLIP3-205ENST00000592017 MBTPS1Q14703 1052 aa15.85■□□□□ 0.13
CLIP3-205ENST00000592017 TCTN1Q2MV58 587 aa15.85■□□□□ 0.13
CLIP3-205ENST00000592017 UTP14CQ5TAP6 766 aaKnown RBP15.85■□□□□ 0.13
CLIP3-205ENST00000592017 SERINC5Q86VE9 423 aa15.85■□□□□ 0.13
CLIP3-205ENST00000592017 GIMAP8Q8ND71 665 aaPredicted RBP15.85■□□□□ 0.13
CLIP3-205ENST00000592017 KCNH7Q9NS40 1196 aa15.85■□□□□ 0.13
CLIP3-205ENST00000592017 KCNJ14Q9UNX9 436 aa15.85■□□□□ 0.13
CLIP3-205ENST00000592017 C17orf102A2RUQ5 167 aa15.84■□□□□ 0.13
CLIP3-205ENST00000592017 JAK2O60674 1132 aa15.84■□□□□ 0.13
CLIP3-205ENST00000592017 CXCL10P02778 98 aa15.84■□□□□ 0.13
CLIP3-205ENST00000592017 ARP10275 920 aa15.84■□□□□ 0.13
CLIP3-205ENST00000592017 ZNF618Q5T7W0 954 aa15.84■□□□□ 0.13
CLIP3-205ENST00000592017 PLA2G4DQ86XP0 818 aa15.84■□□□□ 0.13
CLIP3-205ENST00000592017 CCDC83Q8IWF9 413 aa15.84■□□□□ 0.13
CLIP3-205ENST00000592017 BLIDQ8IZY5 108 aa15.84■□□□□ 0.13
CLIP3-205ENST00000592017 MAFAQ8NHW3 353 aaPredicted RBP15.84■□□□□ 0.13
CLIP3-205ENST00000592017 WASF1Q92558 559 aa15.84■□□□□ 0.13
CLIP3-205ENST00000592017 UIMC1Q96RL1 719 aa15.84■□□□□ 0.13
CLIP3-205ENST00000592017 SDF4Q9BRK5 362 aa15.84■□□□□ 0.13
CLIP3-205ENST00000592017 RNPEPQ9H4A4 650 aa15.84■□□□□ 0.13
CLIP3-205ENST00000592017 LIMCH1Q9UPQ0 1083 aa15.84■□□□□ 0.13
CLIP3-205ENST00000592017 PRUNE2Q8WUY3 3088 aa15.83■□□□□ 0.13
CLIP3-205ENST00000592017 UNC80Q8N2C7 3258 aa15.83■□□□□ 0.13
CLIP3-205ENST00000592017 CHD7Q9P2D1 2997 aa15.83■□□□□ 0.12
CLIP3-205ENST00000592017 GSTTP1A0A1W2PQM5 241 aa15.83■□□□□ 0.12
CLIP3-205ENST00000592017 FAM86B1E9PN63 330 aa15.83■□□□□ 0.12
CLIP3-205ENST00000592017 DDX39AO00148 427 aaKnown RBP15.83■□□□□ 0.12
CLIP3-205ENST00000592017 MAFGO15525 162 aa15.83■□□□□ 0.12
CLIP3-205ENST00000592017 TREHO43280 583 aa15.83■□□□□ 0.12
CLIP3-205ENST00000592017 FAM86B2P0C5J1 330 aa15.83■□□□□ 0.12
CLIP3-205ENST00000592017 ST3GAL1Q11201 340 aa15.83■□□□□ 0.12
CLIP3-205ENST00000592017 RABEP1Q15276 862 aa15.83■□□□□ 0.12
CLIP3-205ENST00000592017 NSUN7Q8NE18 718 aaKnown RBP15.83■□□□□ 0.12
CLIP3-205ENST00000592017 ATP6V0A1Q93050 837 aa15.83■□□□□ 0.12
CLIP3-205ENST00000592017 PRDM12Q9H4Q4 367 aa15.83■□□□□ 0.12
CLIP3-205ENST00000592017 AGO4Q9HCK5 861 aaKnown RBP15.83■□□□□ 0.12
CLIP3-205ENST00000592017 JPH1Q9HDC5 661 aaPredicted RBP15.83■□□□□ 0.12
CLIP3-205ENST00000592017 GJB4Q9NTQ9 266 aa15.83■□□□□ 0.12
CLIP3-205ENST00000592017 SETD4Q9NVD3 440 aa15.83■□□□□ 0.12
CLIP3-205ENST00000592017 PCDHA11Q9Y5I1 949 aa15.83■□□□□ 0.12
CLIP3-205ENST00000592017 CUL9Q8IWT3 2517 aa15.82■□□□□ 0.12
CLIP3-205ENST00000592017 MEIS1O00470 390 aa15.82■□□□□ 0.12
CLIP3-205ENST00000592017 CYP3A4P08684 503 aa15.82■□□□□ 0.12
CLIP3-205ENST00000592017 TCF7P36402 384 aaPredicted RBP15.82■□□□□ 0.12
CLIP3-205ENST00000592017 THPOP40225 353 aa15.82■□□□□ 0.12
CLIP3-205ENST00000592017 ADGRE1Q14246 886 aa15.82■□□□□ 0.12
CLIP3-205ENST00000592017 PRR16Q569H4 304 aa15.82■□□□□ 0.12
CLIP3-205ENST00000592017 NIPA1Q7RTP0 329 aa15.82■□□□□ 0.12
CLIP3-205ENST00000592017 DAGLBQ8NCG7 672 aa15.82■□□□□ 0.12
CLIP3-205ENST00000592017 PHOSPHO2Q8TCD6 241 aa15.82■□□□□ 0.12
CLIP3-205ENST00000592017 TBCKQ8TEA7 893 aa15.82■□□□□ 0.12
CLIP3-205ENST00000592017 SEPT1Q8WYJ6 367 aa15.82■□□□□ 0.12
CLIP3-205ENST00000592017 PHF20Q9BVI0 1012 aa15.82■□□□□ 0.12
CLIP3-205ENST00000592017 SLC28A3Q9HAS3 691 aa15.82■□□□□ 0.12
CLIP3-205ENST00000592017 SLC9A2Q9UBY0 812 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms