RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 SERINC5Q86VE9 423 aa12.02□□□□□ -0.49
VPS4B-207ENST00000591519 FCHSD1Q86WN1 690 aa12.02□□□□□ -0.49
VPS4B-207ENST00000591519 ANKK1Q8NFD2 765 aa12.02□□□□□ -0.49
VPS4B-207ENST00000591519 INPP4AQ96PE3 977 aaPredicted RBP12.02□□□□□ -0.49
VPS4B-207ENST00000591519 LZTS2Q9BRK4 669 aa12.02□□□□□ -0.49
VPS4B-207ENST00000591519 SPZ1Q9BXG8 430 aa12.02□□□□□ -0.49
VPS4B-207ENST00000591519 MLXIPQ9HAP2 919 aa12.02□□□□□ -0.49
VPS4B-207ENST00000591519 PRRC2BQ5JSZ5 2229 aaKnown RBP12.01□□□□□ -0.49
VPS4B-207ENST00000591519 H3BRB1 525 aa12.01□□□□□ -0.49
VPS4B-207ENST00000591519 TNFRSF10AO00220 468 aa12.01□□□□□ -0.49
VPS4B-207ENST00000591519 RFXAPO00287 272 aa12.01□□□□□ -0.49
VPS4B-207ENST00000591519 TLL1O43897 1013 aa12.01□□□□□ -0.49
VPS4B-207ENST00000591519 DDAH1O94760 285 aa12.01□□□□□ -0.49
VPS4B-207ENST00000591519 ARHGEF15O94989 841 aa12.01□□□□□ -0.49
VPS4B-207ENST00000591519 BMP1P13497 986 aa12.01□□□□□ -0.49
VPS4B-207ENST00000591519 KCNJ6P48051 423 aa12.01□□□□□ -0.49
VPS4B-207ENST00000591519 ZNF200P98182 395 aaPredicted RBP12.01□□□□□ -0.49
VPS4B-207ENST00000591519 CAMK2BQ13554 666 aa12.01□□□□□ -0.49
VPS4B-207ENST00000591519 IKBKEQ14164 716 aa12.01□□□□□ -0.49
VPS4B-207ENST00000591519 NEDD9Q14511 834 aa12.01□□□□□ -0.49
VPS4B-207ENST00000591519 MBTPS1Q14703 1052 aa12.01□□□□□ -0.49
VPS4B-207ENST00000591519 GNPTABQ3T906 1256 aa12.01□□□□□ -0.49
VPS4B-207ENST00000591519 ZNF618Q5T7W0 954 aa12.01□□□□□ -0.49
VPS4B-207ENST00000591519 METTL7BQ6UX53 244 aa12.01□□□□□ -0.49
VPS4B-207ENST00000591519 GPKOWQ92917 476 aaPredicted RBP eCLIP12.01□□□□□ -0.49
VPS4B-207ENST00000591519 WNT8BQ93098 351 aa12.01□□□□□ -0.49
VPS4B-207ENST00000591519 SENP7Q9BQF6 1050 aa12.01□□□□□ -0.49
VPS4B-207ENST00000591519 USP26Q9BXU7 913 aa12.01□□□□□ -0.49
VPS4B-207ENST00000591519 TUT1Q9H6E5 874 aaKnown RBP12.01□□□□□ -0.49
VPS4B-207ENST00000591519 BCAS3Q9H6U6 928 aa12.01□□□□□ -0.49
VPS4B-207ENST00000591519 LY9Q9HBG7 655 aa12.01□□□□□ -0.49
VPS4B-207ENST00000591519 LMCD1Q9NZU5 365 aa12.01□□□□□ -0.49
VPS4B-207ENST00000591519 RBM8AQ9Y5S9 174 aaKnown RBP12.01□□□□□ -0.49
VPS4B-207ENST00000591519 TRANK1O15050 2925 aa12□□□□□ -0.49
VPS4B-207ENST00000591519 EPOPA6NHQ4 379 aa12□□□□□ -0.49
VPS4B-207ENST00000591519 MEIS2O14770 477 aa12□□□□□ -0.49
VPS4B-207ENST00000591519 GJB5O95377 273 aa12□□□□□ -0.49
VPS4B-207ENST00000591519 KIF5BP33176 963 aa12□□□□□ -0.49
VPS4B-207ENST00000591519 LIFRP42702 1097 aa12□□□□□ -0.49
VPS4B-207ENST00000591519 GNAQP50148 359 aa12□□□□□ -0.49
VPS4B-207ENST00000591519 SEMA3FQ13275 785 aa12□□□□□ -0.49
VPS4B-207ENST00000591519 TCTN1Q2MV58 587 aa12□□□□□ -0.49
VPS4B-207ENST00000591519 PCNX4Q63HM2 1172 aa12□□□□□ -0.49
VPS4B-207ENST00000591519 ZNF654Q8IZM8 581 aa12□□□□□ -0.49
VPS4B-207ENST00000591519 CTCFLQ8NI51 663 aaPredicted RBP12□□□□□ -0.49
VPS4B-207ENST00000591519 TMEM87BQ96K49 555 aa12□□□□□ -0.49
VPS4B-207ENST00000591519 RAD9AQ99638 391 aa12□□□□□ -0.49
VPS4B-207ENST00000591519 RNPEPQ9H4A4 650 aa12□□□□□ -0.49
VPS4B-207ENST00000591519 KIAA1468Q9P260 1216 aa12□□□□□ -0.49
VPS4B-207ENST00000591519 EMSYQ7Z589 1322 aa12□□□□□ -0.49
VPS4B-207ENST00000591519 NCOR1O75376 2440 aa12□□□□□ -0.49
VPS4B-207ENST00000591519 PTPRSQ13332 1948 aa11.99□□□□□ -0.49
VPS4B-207ENST00000591519 MUC3AQ02505 3323 aa11.99□□□□□ -0.49
VPS4B-207ENST00000591519 RSPH10B2B2RC85 870 aa11.99□□□□□ -0.49
VPS4B-207ENST00000591519 FIBPO43427 364 aa11.99□□□□□ -0.49
VPS4B-207ENST00000591519 LPXNO60711 386 aa11.99□□□□□ -0.49
VPS4B-207ENST00000591519 CAND2O75155 1236 aa11.99□□□□□ -0.49
VPS4B-207ENST00000591519 LGR5O75473 907 aa11.99□□□□□ -0.49
VPS4B-207ENST00000591519 LGALS2P05162 132 aa11.99□□□□□ -0.49
VPS4B-207ENST00000591519 RSPH10BP0C881 870 aa11.99□□□□□ -0.49
VPS4B-207ENST00000591519 MCM5P33992 734 aa11.99□□□□□ -0.49
VPS4B-207ENST00000591519 ADAM17P78536 824 aa11.99□□□□□ -0.49
VPS4B-207ENST00000591519 DEFB103AP81534 67 aa11.99□□□□□ -0.49
VPS4B-207ENST00000591519 NECTIN1Q15223 517 aa11.99□□□□□ -0.49
VPS4B-207ENST00000591519 AAK1Q2M2I8 961 aa11.99□□□□□ -0.49
VPS4B-207ENST00000591519 ADAMTS19Q8TE59 1207 aa11.99□□□□□ -0.49
VPS4B-207ENST00000591519 ARNTL2Q8WYA1 636 aa11.99□□□□□ -0.49
VPS4B-207ENST00000591519 DDX12PQ92771 950 aa11.99□□□□□ -0.49
VPS4B-207ENST00000591519 RRP36Q96EU6 259 aaKnown RBP11.99□□□□□ -0.49
VPS4B-207ENST00000591519 GPR20Q99678 358 aa11.99□□□□□ -0.49
VPS4B-207ENST00000591519 LSG1Q9H089 658 aaKnown RBP11.99□□□□□ -0.49
VPS4B-207ENST00000591519 CERS4Q9HA82 394 aa11.99□□□□□ -0.49
VPS4B-207ENST00000591519 RTEL1Q9NZ71 1219 aa11.99□□□□□ -0.49
VPS4B-207ENST00000591519 SEPT9Q9UHD8 586 aaPredicted RBP11.99□□□□□ -0.49
VPS4B-207ENST00000591519 COG5Q9UP83 839 aa11.99□□□□□ -0.49
VPS4B-207ENST00000591519 C17orf102A2RUQ5 167 aa11.98□□□□□ -0.49
VPS4B-207ENST00000591519 LCHNA4D1U4 455 aa11.98□□□□□ -0.49
VPS4B-207ENST00000591519 PRC1O43663 620 aa11.98□□□□□ -0.49
VPS4B-207ENST00000591519 CALM1P0DP23 149 aa11.98□□□□□ -0.49
VPS4B-207ENST00000591519 CALM2P0DP24 149 aa11.98□□□□□ -0.49
VPS4B-207ENST00000591519 CALM3P0DP25 149 aa11.98□□□□□ -0.49
VPS4B-207ENST00000591519 GNAT1P11488 350 aa11.98□□□□□ -0.49
VPS4B-207ENST00000591519 ERVK-21P61565 698 aa11.98□□□□□ -0.49
VPS4B-207ENST00000591519 GRB10Q13322 594 aa11.98□□□□□ -0.49
VPS4B-207ENST00000591519 PLEKHG4Q58EX7 1191 aa11.98□□□□□ -0.49
VPS4B-207ENST00000591519 C6orf132Q5T0Z8 1188 aa11.98□□□□□ -0.49
VPS4B-207ENST00000591519 USP17L6PQ6QN14 398 aa11.98□□□□□ -0.49
VPS4B-207ENST00000591519 CASC1Q6TDU7 716 aa11.98□□□□□ -0.49
VPS4B-207ENST00000591519 CYFIP1Q7L576 1253 aa11.98□□□□□ -0.49
VPS4B-207ENST00000591519 SRBD1Q8N5C6 995 aaKnown RBP11.98□□□□□ -0.49
VPS4B-207ENST00000591519 GIMAP8Q8ND71 665 aaPredicted RBP11.98□□□□□ -0.49
VPS4B-207ENST00000591519 DBF4BQ8NFT6 615 aa11.98□□□□□ -0.49
VPS4B-207ENST00000591519 SMARCC2Q8TAQ2 1214 aa11.98□□□□□ -0.49
VPS4B-207ENST00000591519 CUL5Q93034 780 aa11.98□□□□□ -0.49
VPS4B-207ENST00000591519 ATP6V0A1Q93050 837 aa11.98□□□□□ -0.49
VPS4B-207ENST00000591519 NOP56O00567 594 aaKnown RBP11.97□□□□□ -0.49
VPS4B-207ENST00000591519 SH2B2O14492 632 aaPredicted RBP11.97□□□□□ -0.49
VPS4B-207ENST00000591519 TREHO43280 583 aa11.97□□□□□ -0.49
VPS4B-207ENST00000591519 SORBS3O60504 671 aa11.97□□□□□ -0.49
VPS4B-207ENST00000591519 SMIM10L2AP0DMW4 78 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms