RNA–Protein interactions for RNA: ENST00000590996.5

NBR1-206, Transcript of NBR1, autophagy cargo receptor, human

APPRIS P3 TSL 1 (best) BASIC

Gene NBR1, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NBR1-206	ENST00000590996	GOLGA6B	A6NDN3	693 aa		11.74	□□□□□ -0.53
NBR1-206	ENST00000590996	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	11.74	□□□□□ -0.53
NBR1-206	ENST00000590996	PALM	O75781	387 aa		11.74	□□□□□ -0.53
NBR1-206	ENST00000590996	ACTN1	P12814	892 aa		11.74	□□□□□ -0.53
NBR1-206	ENST00000590996	RAPGEF1	Q13905	1077 aa		11.74	□□□□□ -0.53
NBR1-206	ENST00000590996	SLC9C1	Q4G0N8	1177 aa		11.74	□□□□□ -0.53
NBR1-206	ENST00000590996	TRIM59	Q8IWR1	403 aa		11.74	□□□□□ -0.53
NBR1-206	ENST00000590996	C10orf67	Q8IYJ2	551 aa		11.74	□□□□□ -0.53
NBR1-206	ENST00000590996	FAM133A	Q8N9E0	248 aa		11.74	□□□□□ -0.53
NBR1-206	ENST00000590996	NOX5	Q96PH1	765 aa		11.74	□□□□□ -0.53
NBR1-206	ENST00000590996	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	11.74	□□□□□ -0.53
NBR1-206	ENST00000590996	LRRC27	Q9C0I9	530 aa		11.74	□□□□□ -0.53
NBR1-206	ENST00000590996	KCNQ5	Q9NR82	932 aa		11.74	□□□□□ -0.53
NBR1-206	ENST00000590996	CWC15	Q9P013	229 aa	Known RBP	11.74	□□□□□ -0.53
NBR1-206	ENST00000590996	CEP72	Q9P209	647 aa		11.74	□□□□□ -0.53
NBR1-206	ENST00000590996	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	11.74	□□□□□ -0.53
NBR1-206	ENST00000590996		A0A087X0T9	212 aa		11.74	□□□□□ -0.53
NBR1-206	ENST00000590996	FAM228B	P0C875	321 aa		11.74	□□□□□ -0.53
NBR1-206	ENST00000590996	DNAJC18	Q9H819	358 aa		11.74	□□□□□ -0.53
NBR1-206	ENST00000590996	BMP2K	Q9NSY1	1161 aa	Predicted RBP	11.74	□□□□□ -0.53
NBR1-206	ENST00000590996	EMILIN3	Q9NT22	766 aa		11.74	□□□□□ -0.53
NBR1-206	ENST00000590996	ADAMTS1	Q9UHI8	967 aa		11.74	□□□□□ -0.53
NBR1-206	ENST00000590996	PCDHA1	Q9Y5I3	950 aa		11.74	□□□□□ -0.53
NBR1-206	ENST00000590996	TAF1L	Q8IZX4	1826 aa		11.74	□□□□□ -0.53
NBR1-206	ENST00000590996	ESYT3	A0FGR9	886 aa		11.74	□□□□□ -0.53
NBR1-206	ENST00000590996	MAGEA9	P43362	315 aa		11.74	□□□□□ -0.53
NBR1-206	ENST00000590996	TCP10	Q12799	353 aa		11.74	□□□□□ -0.53
NBR1-206	ENST00000590996	ADAM9	Q13443	819 aa		11.74	□□□□□ -0.53
NBR1-206	ENST00000590996	CCDC70	Q6NSX1	233 aa		11.74	□□□□□ -0.53
NBR1-206	ENST00000590996	PPP1R18	Q6NYC8	613 aa		11.74	□□□□□ -0.53
NBR1-206	ENST00000590996	GOLGA6L1	Q8N7Z2	621 aa		11.74	□□□□□ -0.53
NBR1-206	ENST00000590996	EHD4	Q9H223	541 aa		11.74	□□□□□ -0.53
NBR1-206	ENST00000590996	SERPING1	P05155	500 aa		11.73	□□□□□ -0.53
NBR1-206	ENST00000590996	HOXA10	P31260	410 aa	Predicted RBP	11.73	□□□□□ -0.53
NBR1-206	ENST00000590996	PTPRO	Q16827	1216 aa		11.73	□□□□□ -0.53
NBR1-206	ENST00000590996	HYI	Q5T013	277 aa		11.73	□□□□□ -0.53
NBR1-206	ENST00000590996	APOBEC3H	Q6NTF7	200 aa	Known RBP	11.73	□□□□□ -0.53
NBR1-206	ENST00000590996	CCDC65	Q8IXS2	484 aa		11.73	□□□□□ -0.53
NBR1-206	ENST00000590996	MYCBP	Q99417	103 aa	Predicted RBP	11.73	□□□□□ -0.53
NBR1-206	ENST00000590996	RABEP2	Q9H5N1	569 aa		11.73	□□□□□ -0.53
NBR1-206	ENST00000590996	ATP6V0A2	Q9Y487	856 aa		11.73	□□□□□ -0.53
NBR1-206	ENST00000590996	LOC102724159	A0A0B4J2E5	919 aa		11.73	□□□□□ -0.53
NBR1-206	ENST00000590996	RBAK-RBAKDN	I3L0D1	243 aa		11.73	□□□□□ -0.53
NBR1-206	ENST00000590996	PPEF1	O14829	653 aa	Predicted RBP	11.73	□□□□□ -0.53
NBR1-206	ENST00000590996	GLI1	P08151	1106 aa		11.73	□□□□□ -0.53
NBR1-206	ENST00000590996	PAFAH1B1	P43034	410 aa		11.73	□□□□□ -0.53
NBR1-206	ENST00000590996	PWP2	Q15269	919 aa	Known RBP	11.73	□□□□□ -0.53
NBR1-206	ENST00000590996	GPATCH4	Q5T3I0	446 aa	Known RBP	11.73	□□□□□ -0.53
NBR1-206	ENST00000590996	EDEM3	Q9BZQ6	932 aa		11.73	□□□□□ -0.53
NBR1-206	ENST00000590996	STIM2	Q9P246	746 aa		11.73	□□□□□ -0.53
NBR1-206	ENST00000590996	NHS	Q6T4R5	1651 aa		11.73	□□□□□ -0.53
NBR1-206	ENST00000590996	KRT18	P05783	430 aa	Known RBP	11.73	□□□□□ -0.53
NBR1-206	ENST00000590996	SLC9A1	P19634	815 aa		11.73	□□□□□ -0.53
NBR1-206	ENST00000590996	ITIH3	Q06033	890 aa		11.73	□□□□□ -0.53
NBR1-206	ENST00000590996	KCNH2	Q12809	1159 aa		11.73	□□□□□ -0.53
NBR1-206	ENST00000590996	PABPC4	Q13310	644 aa	Known RBP eCLIP	11.73	□□□□□ -0.53
NBR1-206	ENST00000590996	TRADD	Q15628	312 aa		11.73	□□□□□ -0.53
NBR1-206	ENST00000590996	CEP63	Q96MT8	703 aa		11.73	□□□□□ -0.53
NBR1-206	ENST00000590996	ANO3	Q9BYT9	981 aa		11.73	□□□□□ -0.53
NBR1-206	ENST00000590996	NT5C3A	Q9H0P0	336 aa		11.73	□□□□□ -0.53
NBR1-206	ENST00000590996	GOLPH3	Q9H4A6	298 aa		11.73	□□□□□ -0.53
NBR1-206	ENST00000590996	KCNMB3	Q9NPA1	279 aa		11.73	□□□□□ -0.53
NBR1-206	ENST00000590996	EEF2	P13639	858 aa	Known RBP	11.72	□□□□□ -0.53
NBR1-206	ENST00000590996	GCFC2	P16383	781 aa	Known RBP	11.72	□□□□□ -0.53
NBR1-206	ENST00000590996	SLC12A3	P55017	1021 aa		11.72	□□□□□ -0.53
NBR1-206	ENST00000590996	KIAA0753	Q2KHM9	967 aa		11.72	□□□□□ -0.53
NBR1-206	ENST00000590996	PRR16	Q569H4	304 aa		11.72	□□□□□ -0.53
NBR1-206	ENST00000590996	TTC19	Q6DKK2	380 aa	Predicted RBP	11.72	□□□□□ -0.53
NBR1-206	ENST00000590996	C8orf74	Q6P047	294 aa		11.72	□□□□□ -0.53
NBR1-206	ENST00000590996	SLC30A10	Q6XR72	485 aa		11.72	□□□□□ -0.53
NBR1-206	ENST00000590996	CATSPER3	Q86XQ3	398 aa		11.72	□□□□□ -0.53
NBR1-206	ENST00000590996	ARL8A	Q96BM9	186 aa		11.72	□□□□□ -0.53
NBR1-206	ENST00000590996	COA1	Q9GZY4	146 aa		11.72	□□□□□ -0.53
NBR1-206	ENST00000590996	SWAP70	Q9UH65	585 aa		11.72	□□□□□ -0.53
NBR1-206	ENST00000590996	GOLGA6C	A6NDK9	693 aa		11.72	□□□□□ -0.53
NBR1-206	ENST00000590996	POLRMT	O00411	1230 aa	Known RBP	11.72	□□□□□ -0.53
NBR1-206	ENST00000590996	MEIS2	O14770	477 aa		11.72	□□□□□ -0.53
NBR1-206	ENST00000590996	IVL	P07476	585 aa		11.72	□□□□□ -0.53
NBR1-206	ENST00000590996	FAM153B	P0C7A2	387 aa		11.72	□□□□□ -0.53
NBR1-206	ENST00000590996	GOLGA6D	P0CG33	693 aa		11.72	□□□□□ -0.53
NBR1-206	ENST00000590996	HOXD13	P35453	343 aa		11.72	□□□□□ -0.53
NBR1-206	ENST00000590996	CARS	P49589	748 aa	Known RBP	11.72	□□□□□ -0.53
NBR1-206	ENST00000590996	KLHL30	Q0D2K2	578 aa		11.72	□□□□□ -0.53
NBR1-206	ENST00000590996	SEPT2	Q15019	361 aa		11.72	□□□□□ -0.53
NBR1-206	ENST00000590996	NAB2	Q15742	525 aa		11.72	□□□□□ -0.53
NBR1-206	ENST00000590996	FAM153C	Q494X1	144 aa		11.72	□□□□□ -0.53
NBR1-206	ENST00000590996	DNAJC21	Q5F1R6	531 aa	Known RBP	11.72	□□□□□ -0.53
NBR1-206	ENST00000590996	CRAMP1	Q96RY5	1269 aa		11.72	□□□□□ -0.53
NBR1-206	ENST00000590996	ZC3H12C	Q9C0D7	883 aa	Known RBP	11.72	□□□□□ -0.53
NBR1-206	ENST00000590996	GAN	Q9H2C0	597 aa		11.72	□□□□□ -0.53
NBR1-206	ENST00000590996	DHX36	Q9H2U1	1008 aa	Known RBP	11.72	□□□□□ -0.53
NBR1-206	ENST00000590996	GOLGA6A	Q9NYA3	693 aa		11.72	□□□□□ -0.53
NBR1-206	ENST00000590996	FAM153A	Q9UHL3	310 aa		11.72	□□□□□ -0.53
NBR1-206	ENST00000590996	NR2F2	P24468	414 aa		11.72	□□□□□ -0.53
NBR1-206	ENST00000590996	GTF2A1	P52655	376 aa	Predicted RBP	11.72	□□□□□ -0.53
NBR1-206	ENST00000590996	CDC37	Q16543	378 aa	Predicted RBP	11.72	□□□□□ -0.53
NBR1-206	ENST00000590996	SLC18A3	Q16572	532 aa		11.72	□□□□□ -0.53
NBR1-206	ENST00000590996	RNF10	Q8N5U6	811 aa	Known RBP	11.72	□□□□□ -0.53
NBR1-206	ENST00000590996	IKZF4	Q9H2S9	585 aa		11.72	□□□□□ -0.53
NBR1-206	ENST00000590996	KDM3A	Q9Y4C1	1321 aa		11.71	□□□□□ -0.53

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