RNA–Protein interactions for RNA: ENST00000589882.1

TREM1-206, Transcript of triggering receptor expressed on myeloid cells 1, human

Gene TREM1, Length 1,876 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TREM1-206	ENST00000589882	NFAT5	O94916	1531 aa		12.84	□□□□□ -0.35
TREM1-206	ENST00000589882	UBR1	Q8IWV7	1749 aa		12.84	□□□□□ -0.35
TREM1-206	ENST00000589882	KDM3B	Q7LBC6	1761 aa		12.84	□□□□□ -0.35
TREM1-206	ENST00000589882	CCDC188	H7C350	402 aa		12.83	□□□□□ -0.36
TREM1-206	ENST00000589882	PIK3C2A	O00443	1686 aa		12.83	□□□□□ -0.36
TREM1-206	ENST00000589882	CEP104	O60308	925 aa		12.83	□□□□□ -0.36
TREM1-206	ENST00000589882	UNC5C	O95185	931 aa		12.83	□□□□□ -0.36
TREM1-206	ENST00000589882	RPN1	P04843	607 aa	Known RBP	12.83	□□□□□ -0.36
TREM1-206	ENST00000589882	NUDT17	P0C025	328 aa		12.83	□□□□□ -0.36
TREM1-206	ENST00000589882	KCNA3	P22001	575 aa		12.83	□□□□□ -0.36
TREM1-206	ENST00000589882	VHL	P40337	213 aa		12.83	□□□□□ -0.36
TREM1-206	ENST00000589882	GJA8	P48165	433 aa		12.83	□□□□□ -0.36
TREM1-206	ENST00000589882	INHBC	P55103	352 aa		12.83	□□□□□ -0.36
TREM1-206	ENST00000589882	MKRN3	Q13064	507 aa	Known RBP	12.83	□□□□□ -0.36
TREM1-206	ENST00000589882	MAP7	Q14244	749 aa		12.83	□□□□□ -0.36
TREM1-206	ENST00000589882	NTRK3	Q16288	839 aa		12.83	□□□□□ -0.36
TREM1-206	ENST00000589882	ARMCX6	Q7L4S7	300 aa		12.83	□□□□□ -0.36
TREM1-206	ENST00000589882	TAOK1	Q7L7X3	1001 aa		12.83	□□□□□ -0.36
TREM1-206	ENST00000589882	COL23A1	Q86Y22	540 aa	Predicted RBP	12.83	□□□□□ -0.36
TREM1-206	ENST00000589882	KLHL7	Q8IXQ5	586 aa		12.83	□□□□□ -0.36
TREM1-206	ENST00000589882	ADSSL1	Q8N142	457 aa		12.83	□□□□□ -0.36
TREM1-206	ENST00000589882	ZNF653	Q96CK0	615 aa		12.83	□□□□□ -0.36
TREM1-206	ENST00000589882	DDX27	Q96GQ7	796 aa	Known RBP	12.83	□□□□□ -0.36
TREM1-206	ENST00000589882	TRIM47	Q96LD4	638 aa		12.83	□□□□□ -0.36
TREM1-206	ENST00000589882	LRMDA	Q9H2I8	198 aa		12.83	□□□□□ -0.36
TREM1-206	ENST00000589882	SLITRK6	Q9H5Y7	841 aa		12.83	□□□□□ -0.36
TREM1-206	ENST00000589882	CCDC87	Q9NVE4	849 aa		12.83	□□□□□ -0.36
TREM1-206	ENST00000589882	NKX1-2	Q9UD57	310 aa	Predicted RBP	12.83	□□□□□ -0.36
TREM1-206	ENST00000589882	PAIP2B	Q9ULR5	123 aa	Known RBP	12.83	□□□□□ -0.36
TREM1-206	ENST00000589882	DAAM1	Q9Y4D1	1078 aa		12.83	□□□□□ -0.36
TREM1-206	ENST00000589882	BZW2	Q9Y6E2	419 aa	Known RBP	12.83	□□□□□ -0.36
TREM1-206	ENST00000589882	STRCP1	A6NGW2	1772 aa		12.83	□□□□□ -0.36
TREM1-206	ENST00000589882	XDH	P47989	1333 aa		12.83	□□□□□ -0.36
TREM1-206	ENST00000589882	VIL1	P09327	827 aa	Known RBP	12.82	□□□□□ -0.36
TREM1-206	ENST00000589882	IFNAR1	P17181	557 aa		12.82	□□□□□ -0.36
TREM1-206	ENST00000589882	CASP1	P29466	404 aa		12.82	□□□□□ -0.36
TREM1-206	ENST00000589882	PTDSS1	P48651	473 aa	Known RBP	12.82	□□□□□ -0.36
TREM1-206	ENST00000589882	PSMD7	P51665	324 aa		12.82	□□□□□ -0.36
TREM1-206	ENST00000589882	HAND2	P61296	217 aa		12.82	□□□□□ -0.36
TREM1-206	ENST00000589882	OCRL	Q01968	901 aa		12.82	□□□□□ -0.36
TREM1-206	ENST00000589882	DHX9	Q08211	1270 aa	Known RBP	12.82	□□□□□ -0.36
TREM1-206	ENST00000589882	MPP3	Q13368	585 aa		12.82	□□□□□ -0.36
TREM1-206	ENST00000589882	CCDC92	Q53HC0	331 aa	Predicted RBP	12.82	□□□□□ -0.36
TREM1-206	ENST00000589882	MEI1	Q5TIA1	1274 aa		12.82	□□□□□ -0.36
TREM1-206	ENST00000589882	BICDL1	Q6ZP65	573 aa		12.82	□□□□□ -0.36
TREM1-206	ENST00000589882	DZIP3	Q86Y13	1208 aa	Known RBP	12.82	□□□□□ -0.36
TREM1-206	ENST00000589882	C2CD5	Q86YS7	1000 aa		12.82	□□□□□ -0.36
TREM1-206	ENST00000589882	THEMIS	Q8N1K5	641 aa	Predicted RBP	12.82	□□□□□ -0.36
TREM1-206	ENST00000589882	TBC1D16	Q8TBP0	767 aa		12.82	□□□□□ -0.36
TREM1-206	ENST00000589882	INPP5D	Q92835	1189 aa		12.82	□□□□□ -0.36
TREM1-206	ENST00000589882	EPSTI1	Q96J88	318 aa		12.82	□□□□□ -0.36
TREM1-206	ENST00000589882	ZNF333	Q96JL9	665 aa		12.82	□□□□□ -0.36
TREM1-206	ENST00000589882	NEUROD6	Q96NK8	337 aa		12.82	□□□□□ -0.36
TREM1-206	ENST00000589882	OLFM3	Q96PB7	478 aa		12.82	□□□□□ -0.36
TREM1-206	ENST00000589882	NAP1L3	Q99457	506 aa	Predicted RBP	12.82	□□□□□ -0.36
TREM1-206	ENST00000589882	PRMT1	Q99873	361 aa	Known RBP	12.82	□□□□□ -0.36
TREM1-206	ENST00000589882	CENPK	Q9BS16	269 aa		12.82	□□□□□ -0.36
TREM1-206	ENST00000589882	PHACTR1	Q9C0D0	580 aa		12.82	□□□□□ -0.36
TREM1-206	ENST00000589882	IL1RAPL1	Q9NZN1	696 aa		12.82	□□□□□ -0.36
TREM1-206	ENST00000589882	NID2	Q14112	1375 aa		12.82	□□□□□ -0.36
TREM1-206	ENST00000589882	PNPLA7	Q6ZV29	1317 aa		12.82	□□□□□ -0.36
TREM1-206	ENST00000589882	MYH7	P12883	1935 aa		12.82	□□□□□ -0.36
TREM1-206	ENST00000589882	SSU72P8	A0A1W2PR75	194 aa		12.82	□□□□□ -0.36
TREM1-206	ENST00000589882	RGS16	O15492	202 aa	Predicted RBP	12.82	□□□□□ -0.36
TREM1-206	ENST00000589882	RANBP6	O60518	1105 aa	Known RBP	12.82	□□□□□ -0.36
TREM1-206	ENST00000589882	COBL	O75128	1261 aa		12.82	□□□□□ -0.36
TREM1-206	ENST00000589882	EIF4B	P23588	611 aa	Known RBP	12.82	□□□□□ -0.36
TREM1-206	ENST00000589882	PRCP	P42785	496 aa		12.82	□□□□□ -0.36
TREM1-206	ENST00000589882	SERPINB4	P48594	390 aa		12.82	□□□□□ -0.36
TREM1-206	ENST00000589882	LSAMP	Q13449	338 aa		12.82	□□□□□ -0.36
TREM1-206	ENST00000589882	TRADD	Q15628	312 aa		12.82	□□□□□ -0.36
TREM1-206	ENST00000589882	C6orf118	Q5T5N4	469 aa		12.82	□□□□□ -0.36
TREM1-206	ENST00000589882	RASIP1	Q5U651	963 aa		12.82	□□□□□ -0.36
TREM1-206	ENST00000589882	FOXB2	Q5VYV0	432 aa		12.82	□□□□□ -0.36
TREM1-206	ENST00000589882	RNF43	Q68DV7	783 aa		12.82	□□□□□ -0.36
TREM1-206	ENST00000589882	ARHGAP27	Q6ZUM4	889 aa		12.82	□□□□□ -0.36
TREM1-206	ENST00000589882	MAEA	Q7L5Y9	396 aa		12.82	□□□□□ -0.36
TREM1-206	ENST00000589882	LONP2	Q86WA8	852 aa		12.82	□□□□□ -0.36
TREM1-206	ENST00000589882	ANKLE2	Q86XL3	938 aa		12.82	□□□□□ -0.36
TREM1-206	ENST00000589882	STAG2	Q8N3U4	1231 aa		12.82	□□□□□ -0.36
TREM1-206	ENST00000589882	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	12.82	□□□□□ -0.36
TREM1-206	ENST00000589882	LPIN2	Q92539	896 aa		12.82	□□□□□ -0.36
TREM1-206	ENST00000589882	MTMR8	Q96EF0	704 aa		12.82	□□□□□ -0.36
TREM1-206	ENST00000589882	NR1H4	Q96RI1	486 aa	Predicted RBP	12.82	□□□□□ -0.36
TREM1-206	ENST00000589882	HAPLN3	Q96S86	360 aa		12.82	□□□□□ -0.36
TREM1-206	ENST00000589882	YIPF2	Q9BWQ6	316 aa		12.82	□□□□□ -0.36
TREM1-206	ENST00000589882	DCLRE1B	Q9H816	532 aa		12.82	□□□□□ -0.36
TREM1-206	ENST00000589882	ETNK1	Q9HBU6	452 aa		12.82	□□□□□ -0.36
TREM1-206	ENST00000589882	GPR108	Q9NPR9	543 aa		12.82	□□□□□ -0.36
TREM1-206	ENST00000589882	ARHGAP20	Q9P2F6	1191 aa		12.82	□□□□□ -0.36
TREM1-206	ENST00000589882	BICDL2	A1A5D9	508 aa		12.81	□□□□□ -0.36
TREM1-206	ENST00000589882	TMEM221	A6NGB7	291 aa		12.81	□□□□□ -0.36
TREM1-206	ENST00000589882	RASSF2	P50749	326 aa		12.81	□□□□□ -0.36
TREM1-206	ENST00000589882	MCL1	Q07820	350 aa		12.81	□□□□□ -0.36
TREM1-206	ENST00000589882	NEXN	Q0ZGT2	675 aa		12.81	□□□□□ -0.36
TREM1-206	ENST00000589882	RBM26	Q5T8P6	1007 aa	Known RBP	12.81	□□□□□ -0.36
TREM1-206	ENST00000589882	RINL	Q6ZS11	566 aa		12.81	□□□□□ -0.36
TREM1-206	ENST00000589882	SGMS1	Q86VZ5	419 aa		12.81	□□□□□ -0.36
TREM1-206	ENST00000589882	MICU3	Q86XE3	530 aa		12.81	□□□□□ -0.36
TREM1-206	ENST00000589882	SMYD1	Q8NB12	490 aa		12.81	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms