RNA–Protein interactions for RNA: ENST00000589216.1

PTPN2-208, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 3

Gene PTPN2, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-208ENST00000589216 SMIM10L2AP0DMW4 78 aa11.25□□□□□ -0.61
PTPN2-208ENST00000589216 SMIM10L2BP0DMW5 78 aa11.25□□□□□ -0.61
PTPN2-208ENST00000589216 FOSBP53539 338 aa11.25□□□□□ -0.61
PTPN2-208ENST00000589216 NLRP5P59047 1200 aa11.25□□□□□ -0.61
PTPN2-208ENST00000589216 PPIGQ13427 754 aaKnown RBP eCLIP11.25□□□□□ -0.61
PTPN2-208ENST00000589216 ANKRD1Q15327 319 aa11.25□□□□□ -0.61
PTPN2-208ENST00000589216 Q7L0L9 218 aa11.25□□□□□ -0.61
PTPN2-208ENST00000589216 C7orf31Q8N865 590 aa11.25□□□□□ -0.61
PTPN2-208ENST00000589216 DAGLBQ8NCG7 672 aa11.25□□□□□ -0.61
PTPN2-208ENST00000589216 CDHR1Q96JP9 859 aa11.25□□□□□ -0.61
PTPN2-208ENST00000589216 GLT8D2Q9H1C3 349 aa11.25□□□□□ -0.61
PTPN2-208ENST00000589216 JPH1Q9HDC5 661 aaPredicted RBP11.25□□□□□ -0.61
PTPN2-208ENST00000589216 IL23AQ9NPF7 189 aa11.25□□□□□ -0.61
PTPN2-208ENST00000589216 SH3GLB2Q9NR46 395 aa11.25□□□□□ -0.61
PTPN2-208ENST00000589216 CXXC1Q9P0U4 656 aaPredicted RBP11.25□□□□□ -0.61
PTPN2-208ENST00000589216 NOD1Q9Y239 953 aa11.25□□□□□ -0.61
PTPN2-208ENST00000589216 MICAL3Q7RTP6 2002 aa11.25□□□□□ -0.61
PTPN2-208ENST00000589216 FAM205CA6NFA0 338 aa11.24□□□□□ -0.61
PTPN2-208ENST00000589216 PITPNM1O00562 1244 aa11.24□□□□□ -0.61
PTPN2-208ENST00000589216 DHX15O43143 795 aaKnown RBP11.24□□□□□ -0.61
PTPN2-208ENST00000589216 TDP2O95551 362 aa11.24□□□□□ -0.61
PTPN2-208ENST00000589216 SUPT20HL2P0C7V6 817 aa11.24□□□□□ -0.61
PTPN2-208ENST00000589216 MARK3P27448 753 aa11.24□□□□□ -0.61
PTPN2-208ENST00000589216 GNA11P29992 359 aa11.24□□□□□ -0.61
PTPN2-208ENST00000589216 RBM25P49756 843 aaKnown RBP11.24□□□□□ -0.61
PTPN2-208ENST00000589216 MBTPS1Q14703 1052 aa11.24□□□□□ -0.61
PTPN2-208ENST00000589216 GPNMBQ14956 572 aa11.24□□□□□ -0.61
PTPN2-208ENST00000589216 TCTN1Q2MV58 587 aa11.24□□□□□ -0.61
PTPN2-208ENST00000589216 RASIP1Q5U651 963 aa11.24□□□□□ -0.61
PTPN2-208ENST00000589216 CPLX2Q6PUV4 134 aaKnown RBP11.24□□□□□ -0.61
PTPN2-208ENST00000589216 TRAF7Q6Q0C0 670 aa11.24□□□□□ -0.61
PTPN2-208ENST00000589216 ZNF365Q70YC5 407 aa11.24□□□□□ -0.61
PTPN2-208ENST00000589216 NIPA1Q7RTP0 329 aa11.24□□□□□ -0.61
PTPN2-208ENST00000589216 DEFB128Q7Z7B8 93 aa11.24□□□□□ -0.61
PTPN2-208ENST00000589216 PLA2G4DQ86XP0 818 aa11.24□□□□□ -0.61
PTPN2-208ENST00000589216 BLIDQ8IZY5 108 aa11.24□□□□□ -0.61
PTPN2-208ENST00000589216 TMEM199Q8N511 208 aa11.24□□□□□ -0.61
PTPN2-208ENST00000589216 OXER1Q8TDS5 423 aa11.24□□□□□ -0.61
PTPN2-208ENST00000589216 LMBR1Q8WVP7 490 aa11.24□□□□□ -0.61
PTPN2-208ENST00000589216 GJA10Q969M2 543 aa11.24□□□□□ -0.61
PTPN2-208ENST00000589216 ZBTB10Q96DT7 871 aa11.24□□□□□ -0.61
PTPN2-208ENST00000589216 PHF20Q9BVI0 1012 aa11.24□□□□□ -0.61
PTPN2-208ENST00000589216 C22orf23Q9BZE7 217 aa11.24□□□□□ -0.61
PTPN2-208ENST00000589216 ORC3Q9UBD5 711 aaPredicted RBP11.24□□□□□ -0.61
PTPN2-208ENST00000589216 SLC9A2Q9UBY0 812 aa11.24□□□□□ -0.61
PTPN2-208ENST00000589216 PCDHA4Q9UN74 947 aa11.24□□□□□ -0.61
PTPN2-208ENST00000589216 MYH9P35579 1960 aaKnown RBP11.24□□□□□ -0.61
PTPN2-208ENST00000589216 NFASCO94856 1347 aa11.24□□□□□ -0.61
PTPN2-208ENST00000589216 EMSYQ7Z589 1322 aa11.24□□□□□ -0.61
PTPN2-208ENST00000589216 CDH23Q9H251 3354 aa11.24□□□□□ -0.61
PTPN2-208ENST00000589216 LOXHD1Q8IVV2 1947 aa11.23□□□□□ -0.61
PTPN2-208ENST00000589216 CHD7Q9P2D1 2997 aa11.23□□□□□ -0.61
PTPN2-208ENST00000589216 GRXCR1A8MXD5 290 aa11.23□□□□□ -0.61
PTPN2-208ENST00000589216 TREHO43280 583 aa11.23□□□□□ -0.61
PTPN2-208ENST00000589216 LGR5O75473 907 aa11.23□□□□□ -0.61
PTPN2-208ENST00000589216 CDKL5O76039 1030 aa11.23□□□□□ -0.61
PTPN2-208ENST00000589216 CD2BP2O95400 341 aaKnown RBP11.23□□□□□ -0.61
PTPN2-208ENST00000589216 IQCF3P0C7M6 154 aa11.23□□□□□ -0.61
PTPN2-208ENST00000589216 CIITAP33076 1130 aa11.23□□□□□ -0.61
PTPN2-208ENST00000589216 ZNF76P36508 570 aa11.23□□□□□ -0.61
PTPN2-208ENST00000589216 ACTR2P61160 394 aa11.23□□□□□ -0.61
PTPN2-208ENST00000589216 RBL2Q08999 1139 aa11.23□□□□□ -0.61
PTPN2-208ENST00000589216 PRR16Q569H4 304 aa11.23□□□□□ -0.61
PTPN2-208ENST00000589216 PSRC1Q6PGN9 363 aaPredicted RBP11.23□□□□□ -0.61
PTPN2-208ENST00000589216 SERINC5Q86VE9 423 aa11.23□□□□□ -0.61
PTPN2-208ENST00000589216 GIMAP8Q8ND71 665 aaPredicted RBP11.23□□□□□ -0.61
PTPN2-208ENST00000589216 BICD2Q8TD16 824 aa11.23□□□□□ -0.61
PTPN2-208ENST00000589216 TBCKQ8TEA7 893 aa11.23□□□□□ -0.61
PTPN2-208ENST00000589216 OSBPL7Q9BZF2 842 aa11.23□□□□□ -0.61
PTPN2-208ENST00000589216 RNPEPQ9H4A4 650 aa11.23□□□□□ -0.61
PTPN2-208ENST00000589216 SETD4Q9NVD3 440 aa11.23□□□□□ -0.61
PTPN2-208ENST00000589216 C17orf102A2RUQ5 167 aa11.22□□□□□ -0.61
PTPN2-208ENST00000589216 IPO5O00410 1097 aaKnown RBP11.22□□□□□ -0.61
PTPN2-208ENST00000589216 CKBP12277 381 aa11.22□□□□□ -0.61
PTPN2-208ENST00000589216 ADAM17P78536 824 aa11.22□□□□□ -0.61
PTPN2-208ENST00000589216 INF2Q27J81 1249 aa11.22□□□□□ -0.61
PTPN2-208ENST00000589216 EARS2Q5JPH6 523 aaKnown RBP11.22□□□□□ -0.61
PTPN2-208ENST00000589216 LRRC8DQ7L1W4 858 aa11.22□□□□□ -0.61
PTPN2-208ENST00000589216 OTOP2Q7RTS6 562 aa11.22□□□□□ -0.61
PTPN2-208ENST00000589216 CCDC60Q8IWA6 550 aaPredicted RBP11.22□□□□□ -0.61
PTPN2-208ENST00000589216 CCDC83Q8IWF9 413 aa11.22□□□□□ -0.61
PTPN2-208ENST00000589216 SEPT1Q8WYJ6 367 aa11.22□□□□□ -0.61
PTPN2-208ENST00000589216 SDF4Q9BRK5 362 aa11.22□□□□□ -0.61
PTPN2-208ENST00000589216 ZNF215Q9UL58 517 aaPredicted RBP11.22□□□□□ -0.61
PTPN2-208ENST00000589216 ARID2Q68CP9 1835 aa11.21□□□□□ -0.61
PTPN2-208ENST00000589216 COL4A4P53420 1690 aaPredicted RBP11.21□□□□□ -0.61
PTPN2-208ENST00000589216 MSH4O15457 936 aa11.21□□□□□ -0.61
PTPN2-208ENST00000589216 MAFGO15525 162 aa11.21□□□□□ -0.61
PTPN2-208ENST00000589216 SLC37A4O43826 429 aa11.21□□□□□ -0.61
PTPN2-208ENST00000589216 EIF5BO60841 1220 aaKnown RBP11.21□□□□□ -0.61
PTPN2-208ENST00000589216 NBNO60934 754 aa11.21□□□□□ -0.61
PTPN2-208ENST00000589216 CTSHP09668 335 aa11.21□□□□□ -0.61
PTPN2-208ENST00000589216 SELPP16109 830 aa11.21□□□□□ -0.61
PTPN2-208ENST00000589216 SETQ01105 290 aaPredicted RBP11.21□□□□□ -0.61
PTPN2-208ENST00000589216 NR5A1Q13285 461 aa11.21□□□□□ -0.61
PTPN2-208ENST00000589216 PTK7Q13308 1070 aa11.21□□□□□ -0.61
PTPN2-208ENST00000589216 ZNF618Q5T7W0 954 aa11.21□□□□□ -0.61
PTPN2-208ENST00000589216 MCTP2Q6DN12 878 aa11.21□□□□□ -0.61
PTPN2-208ENST00000589216 RUFY4Q6ZNE9 571 aa11.21□□□□□ -0.61
PTPN2-208ENST00000589216 CAGE1Q8TC20 777 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms