RNA–Protein interactions for RNA: ENST00000589201.1

LINC00654-202, long intergenic non-protein coding RNA 654, humanhuman

TSL 3 BASIC

Gene LINC00654, Length 579 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-202ENST00000589201 SMIM10L2AP0DMW4 78 aa22.59■■□□□ 1.21
LINC00654-202ENST00000589201 SMIM10L2BP0DMW5 78 aa22.59■■□□□ 1.21
LINC00654-202ENST00000589201 XBP1P17861 261 aa22.59■■□□□ 1.21
LINC00654-202ENST00000589201 USP11P51784 963 aa22.59■■□□□ 1.21
LINC00654-202ENST00000589201 PRR16Q569H4 304 aa22.59■■□□□ 1.21
LINC00654-202ENST00000589201 TBCKQ8TEA7 893 aa22.59■■□□□ 1.21
LINC00654-202ENST00000589201 WASF1Q92558 559 aa22.59■■□□□ 1.21
LINC00654-202ENST00000589201 BUD13Q9BRD0 619 aaKnown RBP eCLIP22.59■■□□□ 1.21
LINC00654-202ENST00000589201 UPF2Q9HAU5 1272 aaKnown RBP22.59■■□□□ 1.21
LINC00654-202ENST00000589201 ZNF215Q9UL58 517 aaPredicted RBP22.59■■□□□ 1.21
LINC00654-202ENST00000589201 TRIP12Q14669 1992 aaPredicted RBP22.58■■□□□ 1.21
LINC00654-202ENST00000589201 TMEM240Q5SV17 173 aa22.58■■□□□ 1.21
LINC00654-202ENST00000589201 DHX38Q92620 1227 aaKnown RBP22.58■■□□□ 1.21
LINC00654-202ENST00000589201 RNPEPQ9H4A4 650 aa22.58■■□□□ 1.21
LINC00654-202ENST00000589201 IL23AQ9NPF7 189 aa22.58■■□□□ 1.21
LINC00654-202ENST00000589201 GTF3C3Q9Y5Q9 886 aa22.58■■□□□ 1.21
LINC00654-202ENST00000589201 C17orf102A2RUQ5 167 aa22.57■■□□□ 1.2
LINC00654-202ENST00000589201 DDX39AO00148 427 aaKnown RBP22.57■■□□□ 1.2
LINC00654-202ENST00000589201 IPO5O00410 1097 aaKnown RBP22.57■■□□□ 1.2
LINC00654-202ENST00000589201 PITPNM1O00562 1244 aa22.57■■□□□ 1.2
LINC00654-202ENST00000589201 DHX15O43143 795 aaKnown RBP22.57■■□□□ 1.2
LINC00654-202ENST00000589201 ACTR2P61160 394 aa22.57■■□□□ 1.2
LINC00654-202ENST00000589201 SETQ01105 290 aaPredicted RBP22.57■■□□□ 1.2
LINC00654-202ENST00000589201 BFSP2Q13515 415 aa22.57■■□□□ 1.2
LINC00654-202ENST00000589201 ZNF365Q70YC5 407 aa22.57■■□□□ 1.2
LINC00654-202ENST00000589201 RETREG2Q8NC44 543 aa22.57■■□□□ 1.2
LINC00654-202ENST00000589201 GLG1Q92896 1179 aa22.57■■□□□ 1.2
LINC00654-202ENST00000589201 LENG9Q96B70 501 aa22.57■■□□□ 1.2
LINC00654-202ENST00000589201 RNPC3Q96LT9 517 aaKnown RBP22.57■■□□□ 1.2
LINC00654-202ENST00000589201 PCYT2Q99447 389 aa22.57■■□□□ 1.2
LINC00654-202ENST00000589201 ZNF577Q9BSK1 485 aa22.57■■□□□ 1.2
LINC00654-202ENST00000589201 CCNE2O96020 404 aa22.56■■□□□ 1.2
LINC00654-202ENST00000589201 IQCF3P0C7M6 154 aa22.56■■□□□ 1.2
LINC00654-202ENST00000589201 HOXC8P31273 242 aa22.56■■□□□ 1.2
LINC00654-202ENST00000589201 PTK7Q13308 1070 aa22.56■■□□□ 1.2
LINC00654-202ENST00000589201 CCDC83Q8IWF9 413 aa22.56■■□□□ 1.2
LINC00654-202ENST00000589201 OXER1Q8TDS5 423 aa22.56■■□□□ 1.2
LINC00654-202ENST00000589201 VWCEQ96DN2 955 aa22.56■■□□□ 1.2
LINC00654-202ENST00000589201 ZSCAN31Q96LW9 406 aaPredicted RBP22.56■■□□□ 1.2
LINC00654-202ENST00000589201 SMARCAD1Q9H4L7 1026 aa22.56■■□□□ 1.2
LINC00654-202ENST00000589201 SETD4Q9NVD3 440 aa22.56■■□□□ 1.2
LINC00654-202ENST00000589201 LGR5O75473 907 aa22.55■■□□□ 1.2
LINC00654-202ENST00000589201 ATG7O95352 703 aa22.55■■□□□ 1.2
LINC00654-202ENST00000589201 MARK3P27448 753 aa22.55■■□□□ 1.2
LINC00654-202ENST00000589201 NONOQ15233 471 aaKnown RBP eCLIP22.55■■□□□ 1.2
LINC00654-202ENST00000589201 RABEP1Q15276 862 aa22.55■■□□□ 1.2
LINC00654-202ENST00000589201 RPUSD2Q8IZ73 545 aaKnown RBP22.55■■□□□ 1.2
LINC00654-202ENST00000589201 CCDC155Q8N6L0 562 aa22.55■■□□□ 1.2
LINC00654-202ENST00000589201 CAGE1Q8TC20 777 aa22.55■■□□□ 1.2
LINC00654-202ENST00000589201 ATP6V0A1Q93050 837 aa22.55■■□□□ 1.2
LINC00654-202ENST00000589201 WNT8BQ93098 351 aa22.55■■□□□ 1.2
LINC00654-202ENST00000589201 ERAP1Q9NZ08 941 aa22.55■■□□□ 1.2
LINC00654-202ENST00000589201 TREHO43280 583 aa22.54■■□□□ 1.2
LINC00654-202ENST00000589201 INF2Q27J81 1249 aa22.54■■□□□ 1.2
LINC00654-202ENST00000589201 TRIM71Q2Q1W2 868 aaKnown RBP22.54■■□□□ 1.2
LINC00654-202ENST00000589201 PSRC1Q6PGN9 363 aaPredicted RBP22.54■■□□□ 1.2
LINC00654-202ENST00000589201 KRT25Q7Z3Z0 450 aa22.54■■□□□ 1.2
LINC00654-202ENST00000589201 DEFB128Q7Z7B8 93 aa22.54■■□□□ 1.2
LINC00654-202ENST00000589201 AFAP1L1Q8TED9 768 aa22.54■■□□□ 1.2
LINC00654-202ENST00000589201 TBC1D22BQ9NU19 505 aa22.54■■□□□ 1.2
LINC00654-202ENST00000589201 EMSYQ7Z589 1322 aa22.54■■□□□ 1.2
LINC00654-202ENST00000589201 SCN5AQ14524 2016 aa22.53■■□□□ 1.2
LINC00654-202ENST00000589201 CYP3A7-CYP3A51PA0A087WV96 503 aa22.53■■□□□ 1.2
LINC00654-202ENST00000589201 TDP2O95551 362 aa22.53■■□□□ 1.2
LINC00654-202ENST00000589201 FGBP02675 491 aa22.53■■□□□ 1.2
LINC00654-202ENST00000589201 CKBP12277 381 aa22.53■■□□□ 1.2
LINC00654-202ENST00000589201 CYP3A7P24462 503 aa22.53■■□□□ 1.2
LINC00654-202ENST00000589201 FOSBP53539 338 aa22.53■■□□□ 1.2
LINC00654-202ENST00000589201 ABHD15Q6UXT9 468 aa22.53■■□□□ 1.2
LINC00654-202ENST00000589201 SERINC5Q86VE9 423 aa22.53■■□□□ 1.2
LINC00654-202ENST00000589201 AZI2Q9H6S1 392 aa22.53■■□□□ 1.2
LINC00654-202ENST00000589201 SH2B1Q9NRF2 756 aaPredicted RBP22.53■■□□□ 1.2
LINC00654-202ENST00000589201 CCDC194A0A1B0GVG4 234 aa22.52■■□□□ 1.2
LINC00654-202ENST00000589201 MSH4O15457 936 aa22.52■■□□□ 1.2
LINC00654-202ENST00000589201 GNAT1P11488 350 aa22.52■■□□□ 1.2
LINC00654-202ENST00000589201 SELPP16109 830 aa22.52■■□□□ 1.2
LINC00654-202ENST00000589201 STAT5BP51692 787 aa22.52■■□□□ 1.2
LINC00654-202ENST00000589201 ADAM17P78536 824 aa22.52■■□□□ 1.2
LINC00654-202ENST00000589201 RBL2Q08999 1139 aa22.52■■□□□ 1.2
LINC00654-202ENST00000589201 Q4G0T1 1027 aa22.52■■□□□ 1.2
LINC00654-202ENST00000589201 OTOP2Q7RTS6 562 aa22.52■■□□□ 1.2
LINC00654-202ENST00000589201 PLPPR4Q7Z2D5 763 aa22.52■■□□□ 1.2
LINC00654-202ENST00000589201 LMBR1Q8WVP7 490 aa22.52■■□□□ 1.2
LINC00654-202ENST00000589201 TBC1D32Q96NH3 1257 aa22.52■■□□□ 1.2
LINC00654-202ENST00000589201 LLPHQ9BRT6 129 aaKnown RBP22.52■■□□□ 1.2
LINC00654-202ENST00000589201 NRCAMQ92823 1304 aa22.52■■□□□ 1.2
LINC00654-202ENST00000589201 KAT6AQ92794 2004 aa22.52■■□□□ 1.19
LINC00654-202ENST00000589201 IGKV6D-21A0A0A0MT36 114 aa22.51■■□□□ 1.19
LINC00654-202ENST00000589201 RFC2P35250 354 aa22.51■■□□□ 1.19
LINC00654-202ENST00000589201 KRT2P35908 639 aa22.51■■□□□ 1.19
LINC00654-202ENST00000589201 PPFIA1Q13136 1202 aa22.51■■□□□ 1.19
LINC00654-202ENST00000589201 NR5A1Q13285 461 aa22.51■■□□□ 1.19
LINC00654-202ENST00000589201 GPNMBQ14956 572 aa22.51■■□□□ 1.19
LINC00654-202ENST00000589201 EARS2Q5JPH6 523 aaKnown RBP22.51■■□□□ 1.19
LINC00654-202ENST00000589201 ZNF618Q5T7W0 954 aa22.51■■□□□ 1.19
LINC00654-202ENST00000589201 RASIP1Q5U651 963 aa22.51■■□□□ 1.19
LINC00654-202ENST00000589201 PIK3AP1Q6ZUJ8 805 aa22.51■■□□□ 1.19
LINC00654-202ENST00000589201 LRRC8DQ7L1W4 858 aa22.51■■□□□ 1.19
LINC00654-202ENST00000589201 HERVK_113Q902F9 699 aa22.51■■□□□ 1.19
LINC00654-202ENST00000589201 GJA10Q969M2 543 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms