RNA–Protein interactions for RNA: ENST00000588284.1

CHMP1B-202, Transcript of charged multivesicular body protein 1B, humanhuman

TSL 3

Gene CHMP1B, Length 435 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1B-202ENST00000588284 KRT76Q01546 638 aa11.75□□□□□ -0.53
CHMP1B-202ENST00000588284 PDE4DQ08499 809 aa11.75□□□□□ -0.53
CHMP1B-202ENST00000588284 CNNM4Q6P4Q7 775 aa11.75□□□□□ -0.53
CHMP1B-202ENST00000588284 KCNV1Q6PIU1 500 aa11.75□□□□□ -0.53
CHMP1B-202ENST00000588284 CATSPER3Q86XQ3 398 aa11.75□□□□□ -0.53
CHMP1B-202ENST00000588284 RASAL3Q86YV0 1011 aa11.75□□□□□ -0.53
CHMP1B-202ENST00000588284 GRAMD1CQ8IYS0 662 aa11.75□□□□□ -0.53
CHMP1B-202ENST00000588284 FAM133AQ8N9E0 248 aa11.75□□□□□ -0.53
CHMP1B-202ENST00000588284 RDM1Q8NG50 284 aa11.75□□□□□ -0.53
CHMP1B-202ENST00000588284 GJA10Q969M2 543 aa11.75□□□□□ -0.53
CHMP1B-202ENST00000588284 NACC1Q96RE7 527 aa11.75□□□□□ -0.53
CHMP1B-202ENST00000588284 HSD17B14Q9BPX1 270 aa11.75□□□□□ -0.53
CHMP1B-202ENST00000588284 NUDT12Q9BQG2 462 aa11.75□□□□□ -0.53
CHMP1B-202ENST00000588284 EIF2AK1Q9BQI3 630 aaKnown RBP11.75□□□□□ -0.53
CHMP1B-202ENST00000588284 CBX8Q9HC52 389 aa11.75□□□□□ -0.53
CHMP1B-202ENST00000588284 IVNS1ABPQ9Y6Y0 642 aa11.75□□□□□ -0.53
CHMP1B-202ENST00000588284 ASB14A6NK59 587 aa11.74□□□□□ -0.53
CHMP1B-202ENST00000588284 TMEM88BA6NKF7 163 aa11.74□□□□□ -0.53
CHMP1B-202ENST00000588284 SPATA31C2B4DYI2 1134 aa11.74□□□□□ -0.53
CHMP1B-202ENST00000588284 DHX15O43143 795 aaKnown RBP11.74□□□□□ -0.53
CHMP1B-202ENST00000588284 DKC1O60832 514 aaKnown RBP eCLIP11.74□□□□□ -0.53
CHMP1B-202ENST00000588284 P4HBP07237 508 aaKnown RBP11.74□□□□□ -0.53
CHMP1B-202ENST00000588284 SLC10A3P09131 477 aa11.74□□□□□ -0.53
CHMP1B-202ENST00000588284 TGFB3P10600 412 aa11.74□□□□□ -0.53
CHMP1B-202ENST00000588284 ERCC5P28715 1186 aaPredicted RBP11.74□□□□□ -0.53
CHMP1B-202ENST00000588284 ICAM3P32942 547 aa11.74□□□□□ -0.53
CHMP1B-202ENST00000588284 JAK3P52333 1124 aa11.74□□□□□ -0.53
CHMP1B-202ENST00000588284 CNTN2Q02246 1040 aa11.74□□□□□ -0.53
CHMP1B-202ENST00000588284 SREBF2Q12772 1141 aa11.74□□□□□ -0.53
CHMP1B-202ENST00000588284 FSTL1Q12841 308 aa11.74□□□□□ -0.53
CHMP1B-202ENST00000588284 CUL4BQ13620 913 aa11.74□□□□□ -0.53
CHMP1B-202ENST00000588284 MCM6Q14566 821 aa11.74□□□□□ -0.53
CHMP1B-202ENST00000588284 WDR78Q5VTH9 848 aa11.74□□□□□ -0.53
CHMP1B-202ENST00000588284 ISM2Q6H9L7 571 aa11.74□□□□□ -0.53
CHMP1B-202ENST00000588284 ASTLQ6HA08 431 aaPredicted RBP11.74□□□□□ -0.53
CHMP1B-202ENST00000588284 B3GNT9Q6UX72 402 aa11.74□□□□□ -0.53
CHMP1B-202ENST00000588284 MIER3Q7Z3K6 550 aa11.74□□□□□ -0.53
CHMP1B-202ENST00000588284 FAM43AQ8N2R8 423 aa11.74□□□□□ -0.53
CHMP1B-202ENST00000588284 ANKRD13CQ8N6S4 541 aa11.74□□□□□ -0.53
CHMP1B-202ENST00000588284 GIMAP8Q8ND71 665 aaPredicted RBP11.74□□□□□ -0.53
CHMP1B-202ENST00000588284 BBXQ8WY36 941 aaPredicted RBP11.74□□□□□ -0.53
CHMP1B-202ENST00000588284 STAMQ92783 540 aa11.74□□□□□ -0.53
CHMP1B-202ENST00000588284 PURBQ96QR8 312 aaKnown RBP11.74□□□□□ -0.53
CHMP1B-202ENST00000588284 UIMC1Q96RL1 719 aa11.74□□□□□ -0.53
CHMP1B-202ENST00000588284 MTRQ99707 1265 aa11.74□□□□□ -0.53
CHMP1B-202ENST00000588284 PTPN18Q99952 460 aa11.74□□□□□ -0.53
CHMP1B-202ENST00000588284 SENP7Q9BQF6 1050 aa11.74□□□□□ -0.53
CHMP1B-202ENST00000588284 TRIM9Q9C026 710 aa11.74□□□□□ -0.53
CHMP1B-202ENST00000588284 BLOC1S4Q9NUP1 217 aa11.74□□□□□ -0.53
CHMP1B-202ENST00000588284 NFASCO94856 1347 aa11.74□□□□□ -0.53
CHMP1B-202ENST00000588284 DNAJC25-GNG10A0A024R161 153 aa11.73□□□□□ -0.53
CHMP1B-202ENST00000588284 A0A0G2JMZ2 1700 aa11.73□□□□□ -0.53
CHMP1B-202ENST00000588284 SOWAHBA6NEL2 793 aa11.73□□□□□ -0.53
CHMP1B-202ENST00000588284 EML1O00423 815 aa11.73□□□□□ -0.53
CHMP1B-202ENST00000588284 IKBKBO14920 756 aa11.73□□□□□ -0.53
CHMP1B-202ENST00000588284 ATMINO43313 823 aaPredicted RBP11.73□□□□□ -0.53
CHMP1B-202ENST00000588284 MED24O75448 989 aa11.73□□□□□ -0.53
CHMP1B-202ENST00000588284 SLITRK3O94933 977 aa11.73□□□□□ -0.53
CHMP1B-202ENST00000588284 EYA4O95677 639 aa11.73□□□□□ -0.53
CHMP1B-202ENST00000588284 PLA2G4BP0C869 781 aa11.73□□□□□ -0.53
CHMP1B-202ENST00000588284 SPATA31C1P0DKV0 1188 aa11.73□□□□□ -0.53
CHMP1B-202ENST00000588284 EDNRBP24530 442 aa11.73□□□□□ -0.53
CHMP1B-202ENST00000588284 MAPK4P31152 587 aa11.73□□□□□ -0.53
CHMP1B-202ENST00000588284 PSMD2Q13200 908 aa11.73□□□□□ -0.53
CHMP1B-202ENST00000588284 STIM1Q13586 685 aa11.73□□□□□ -0.53
CHMP1B-202ENST00000588284 DHX8Q14562 1220 aaKnown RBP11.73□□□□□ -0.53
CHMP1B-202ENST00000588284 IQCB1Q15051 598 aa11.73□□□□□ -0.53
CHMP1B-202ENST00000588284 FAM110CQ1W6H9 321 aa11.73□□□□□ -0.53
CHMP1B-202ENST00000588284 DPCR1Q3MIW9 517 aa11.73□□□□□ -0.53
CHMP1B-202ENST00000588284 ZNF658Q5TYW1 1059 aaPredicted RBP11.73□□□□□ -0.53
CHMP1B-202ENST00000588284 ZNF746Q6NUN9 644 aaPredicted RBP11.73□□□□□ -0.53
CHMP1B-202ENST00000588284 TPH2Q8IWU9 490 aa11.73□□□□□ -0.53
CHMP1B-202ENST00000588284 SYT2Q8N9I0 419 aaPredicted RBP11.73□□□□□ -0.53
CHMP1B-202ENST00000588284 BLZF1Q9H2G9 400 aa11.73□□□□□ -0.53
CHMP1B-202ENST00000588284 UNC45AQ9H3U1 944 aa11.73□□□□□ -0.53
CHMP1B-202ENST00000588284 SLC5A4Q9NY91 659 aa11.73□□□□□ -0.53
CHMP1B-202ENST00000588284 ABT1Q9ULW3 272 aaKnown RBP11.73□□□□□ -0.53
CHMP1B-202ENST00000588284 POTEB3A0JP26 581 aa11.72□□□□□ -0.53
CHMP1B-202ENST00000588284 WDR64B1ANS9 1081 aa11.72□□□□□ -0.53
CHMP1B-202ENST00000588284 E9PMD0 336 aa11.72□□□□□ -0.53
CHMP1B-202ENST00000588284 PEX10O60683 326 aa11.72□□□□□ -0.53
CHMP1B-202ENST00000588284 RHOBTB3O94955 611 aa11.72□□□□□ -0.53
CHMP1B-202ENST00000588284 ASIC1P78348 528 aa11.72□□□□□ -0.53
CHMP1B-202ENST00000588284 ITGB3BPQ13352 177 aaPredicted RBP11.72□□□□□ -0.53
CHMP1B-202ENST00000588284 TAF1CQ15572 869 aaPredicted RBP11.72□□□□□ -0.53
CHMP1B-202ENST00000588284 ECM1Q16610 540 aa11.72□□□□□ -0.53
CHMP1B-202ENST00000588284 POTEBQ6S5H4 581 aa11.72□□□□□ -0.53
CHMP1B-202ENST00000588284 C11orf57Q6ZUT1 292 aaPredicted RBP11.72□□□□□ -0.53
CHMP1B-202ENST00000588284 UNC13DQ70J99 1090 aa11.72□□□□□ -0.53
CHMP1B-202ENST00000588284 LUZP1Q86V48 1076 aa11.72□□□□□ -0.53
CHMP1B-202ENST00000588284 SMAP1Q8IYB5 467 aaPredicted RBP11.72□□□□□ -0.53
CHMP1B-202ENST00000588284 ENOX1Q8TC92 643 aaKnown RBP11.72□□□□□ -0.53
CHMP1B-202ENST00000588284 DYDC2Q96IM9 177 aa11.72□□□□□ -0.53
CHMP1B-202ENST00000588284 ZSWIM4Q9H7M6 989 aa11.72□□□□□ -0.53
CHMP1B-202ENST00000588284 EFCC1Q9HA90 598 aa11.72□□□□□ -0.53
CHMP1B-202ENST00000588284 ZFYVE28Q9HCC9 887 aa11.72□□□□□ -0.53
CHMP1B-202ENST00000588284 EXOC1Q9NV70 894 aa11.72□□□□□ -0.53
CHMP1B-202ENST00000588284 DIS3Q9Y2L1 958 aaKnown RBP11.72□□□□□ -0.53
CHMP1B-202ENST00000588284 SAMM50Q9Y512 469 aa11.72□□□□□ -0.53
CHMP1B-202ENST00000588284 RBBP6Q7Z6E9 1792 aaKnown RBP11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms